Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01067 ATGGCCGGCGGCCAGTCCCGTAAGTGGCTGGTTCTAGTAGCGACCATATGGATTCAGGCATTCACAGGCACGAACTTCGATTTCTCGGCTTACTCTTCCAGATTGAAATCGGTTTTAGCCATTTCTCAGGTTCAGCTTAATTACCTCGCCACCGCCTCCGATCTCGGCAAAGTCTTCGGCTGGTCCTCTGGCTTGGCTCTGCTTCACCTGCCTTTGCCGCTCGTTCTCTTCATCGCCGCTTTTTTGGGACTCATCGGCTACGGCTTCCAATGGCTTCTAATCGCTGATTTCATCTCCTTCCCCTATTTCCTGGTGTTCTTCTTGTGTTTGCTTGCCGGTTGTAGCATTTGTTGGTTCAACACAGTTTGTTTCGTCCTTTGCATTCGAAATTTCTCTGCAAATCGGCCATTGGCGTTATCTCTCACTGTCAGCTTCAATGGCGTCAGTGCAGCTTTCTACACCCTCGCCGGCAACGCCATTAATCCCTCTTCCCCTCCCATTTACCTCCTCCTCAATGCTCTCGTTCCCCTTCTCACCTCCATCGCCGCCTTCCTCCCCGTCCTCCACCAACCGCCACTTCACTCTCTTTCTCTCTCCTCCCACGCCGTCCACCGAGACTCTCTCATTTTTCTCATCTTGAATTTCCTCGCCGTCGCCGTTGGAATCTACCTTCTCCTCTTTGGCTCTGTCACTTCCGCTGATCCCATGATCGCAAGACTCCTCTTCATCGGAGCCATCGTTCTTCTTATCTTGCCTCTCTGTATTCCCGGTGTTGTTTACGCCAATGATTGGTTCCATCGAACCGTTAATTCCAGCTTCAGTCTCGACGGATCTAATTTCATTCTCGTCCACGACGAAGATCTCGAGTTTCACAAAGAGTTGCTCCTCACTCGCGAAACGAGTGGAAGCTTAGGCAATGGCGCATCTCGGTTGTTGTCCGAATCTACTTTGCTAATTGACGGTGAGATTGAATCATCGAAAGGCTGTTTTCGGAAATTGATTGAGATAGATCAATTAGCGATGCTTGGGGAAGAGCATTCGTCGAGTAGATTGGTGAAACGCCTGGATTTTTGGCTGTATTTTATGGCTTACATTTGTGGAGGCACAATCGGTCTCGTTTACAGCAATAACATTGGTCAGATTGCACAGTCGCTAGGGCTGAGTTCAAAAACCACAGCGATTGTAACACTGTACTCCTCCTTCTCCTTCTTCGGCCGATTGCTCTCCGCCGTACCGGACTACATTCGAGCGAAATTGTATTTCGCAAGAACAGGATGGCTTTCAATTGCCCTAATTCCAACTCCCATAGCATTCTTCCTGCTATCGGCGTCATCGAGTGCGTTGGCAGTGTACATAGGCACGGCGTTGATCGGTTTGAGCTCGGGATTCATATTCGCAGCGGCAGTTTCGATTACCGCGGAGCTGTTCGGGCCAAATAGCTTAGGCGTTAACCACAACATTTTGATCACAAACATTCCGATCGGATCTCTGCTGTACGGGATGTTTGCAGCGGTGGTGTACGATTCGCAGGGAAGAAGCTCCGGCGATGGGGAGGCAGTTGTGTGCATGGGAAGAAGGTGCTATTTCTTAACATTTGTATTCTGTGGATGCATTTCTGTTATGGGATTGGTTTCGAGTGTGTTACTGTTCTTGAGAACAAGACATGCATATGACCACTTTGAAAGTAGTAGGATTTCTAGTAGTTCAAATCGATTGTATTGA 1722 48.9 MAGGQSRKWLVLVATIWIQAFTGTNFDFSAYSSRLKSVLAISQVQLNYLATASDLGKVFGWSSGLALLHLPLPLVLFIAAFLGLIGYGFQWLLIADFISFPYFLVFFLCLLAGCSICWFNTVCFVLCIRNFSANRPLALSLTVSFNGVSAAFYTLAGNAINPSSPPIYLLLNALVPLLTSIAAFLPVLHQPPLHSLSLSSHAVHRDSLIFLILNFLAVAVGIYLLLFGSVTSADPMIARLLFIGAIVLLILPLCIPGVVYANDWFHRTVNSSFSLDGSNFILVHDEDLEFHKELLLTRETSGSLGNGASRLLSESTLLIDGEIESSKGCFRKLIEIDQLAMLGEEHSSSRLVKRLDFWLYFMAYICGGTIGLVYSNNIGQIAQSLGLSSKTTAIVTLYSSFSFFGRLLSAVPDYIRAKLYFARTGWLSIALIPTPIAFFLLSASSSALAVYIGTALIGLSSGFIFAAAVSITAELFGPNSLGVNHNILITNIPIGSLLYGMFAAVVYDSQGRSSGDGEAVVCMGRRCYFLTFVFCGCISVMGLVSSVLLFLRTRHAYDHFESSRISSSSNRLY 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27273020 27280245 + ClCG07G011240.1 Cla07g01067 277055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01067 573 Gene3D MFS general substrate transporter like domains 350 561 IPR036259 -
Cla07g01067 573 SUPERFAMILY MFS general substrate transporter 344 555 IPR036259 -
Cla07g01067 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 568 - -
Cla07g01067 573 Pfam Nodulin-like 8 256 IPR010658 -
Cla07g01067 573 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 568 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g00057 Cla-Chr6:594928 Cla07g01067 Cla-Chr7:27273020 0 dispersed
Cla07g01067 Cla-Chr7:27273020 Cla02g00435 Cla-Chr2:4286729 2.40E-63 dispersed
Cla07g01067 Cla-Chr7:27273020 Cla02g01155 Cla-Chr2:24894424 4.24E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01067 - - csv:101211287 982.63