Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01152 | ATGGACACAGAGGAAGCTCCATCGACACCGGTGACGCCGGGGACTCCCGGGGCTCCGCTGTTTGGACGAGTGAAGGATAATCAGCATGGAAGTGAGAATGGTAAAAGATCTCTTCTCAAGAGCTGCATCTCTTTCAATGTTGATGATAATTGGGGCAGTGAAGAAGGAGGCTTATCTAAACTAGTCTCTTCTTGTTCATTGCCGTACCCTCCTGTCTCACTTGCAAGAAAGGTGGGAGCGGAGTTCATAGGTACCTCGATACTCATCTTTGCCGGAACCGCCACGGCCATCGTGAACCAAAAGACGAAAGGAACCGAAACACTGATTGGGCTGGCGGCCTCCACCGGCCTTGCGGTGATGATTGTGATCTTGTCGACGGGTCACATCTCTGGAGCCCATCTGAATCCGGCCATCACCATTGCTTTTGCTGCGTTGAAGCAGTTTCCATGGAAGCATGTGCCAGTGTATATTGGAGCTCAAATGGTGGCTTCTTTGTGTTCTTCTTTTGCATTGAAATGGATCTTTGATCCCATAATGGGAGGAGGAGCCACTGTTCCTTCATGTGGAAATGCCCAAGCTTTTGCTCTTGAGTTTATCATTAGCTTCAACCTCATGTTCGTCATCACTGCTGTCGCTACTGACACTCGGGCTGGGGATGACATGGAATTAGAAATGCAGGTGGGAGAATTGGCGGGAATCGCGGTAGGAGCAACCGTTATGCTCAATGTACTCATCGCCGGACAAACAACTGGAGCTTCAATGAATCCAGTAAGAACACTGGGGCCAGCCATTGCTGCAAACAACTTTAGAGCCATTTGGATTTACCTCACAGCTCCCATACTAGGGACATTGTGTGGAGCTGGAATCTACACTGCAGTTAAGTTGCCCGACAAAGATGGCAATTCACGCTTGCCTTCTACTGCAGGAAGCTTTCGAGGATGA | 942 | 49.47 | MDTEEAPSTPVTPGTPGAPLFGRVKDNQHGSENGKRSLLKSCISFNVDDNWGSEEGGLSKLVSSCSLPYPPVSLARKVGAEFIGTSILIFAGTATAIVNQKTKGTETLIGLAASTGLAVMIVILSTGHISGAHLNPAITIAFAALKQFPWKHVPVYIGAQMVASLCSSFALKWIFDPIMGGGATVPSCGNAQAFALEFIISFNLMFVITAVATDTRAGDDMELEMQVGELAGIAVGATVMLNVLIAGQTTGASMNPVRTLGPAIAANNFRAIWIYLTAPILGTLCGAGIYTAVKLPDKDGNSRLPSTAGSFRG | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 28462158 | 28466557 | + | ClCG07G012100.2 | Cla07g01152 | 277140 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01152 | 313 | ProSitePatterns | MIP family signature. | 133 | 141 | IPR022357 | - | |
Cla07g01152 | 313 | Gene3D | Glycerol uptake facilitator protein. | 69 | 302 | IPR023271 | - | |
Cla07g01152 | 313 | PANTHER | AQUAPORIN NIP2-1 | 6 | 301 | IPR034294 | - | |
Cla07g01152 | 313 | Pfam | Major intrinsic protein | 73 | 290 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g01152 | 313 | SUPERFAMILY | Aquaporin-like | 72 | 299 | IPR023271 | - | |
Cla07g01152 | 313 | PRINTS | Major intrinsic protein family signature | 196 | 214 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g01152 | 313 | PRINTS | Major intrinsic protein family signature | 273 | 293 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g01152 | 313 | PRINTS | Major intrinsic protein family signature | 115 | 139 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g01152 | 313 | PRINTS | Major intrinsic protein family signature | 236 | 258 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g01152 | 313 | PRINTS | Major intrinsic protein family signature | 152 | 171 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g01152 | 313 | PRINTS | Major intrinsic protein family signature | 76 | 95 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cla07g01152 | 313 | PANTHER | BNAA02G36290D PROTEIN | 6 | 301 | - | - | |
Cla07g01152 | 313 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cla07g01152 | 313 | CDD | MIP | 76 | 290 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00114 | Cla-Chr1:1000302 | Cla07g01152 | Cla-Chr7:28462158 | 2.52E-96 | dispersed | |
Cla07g01152 | Cla-Chr7:28462158 | Cla10g01436 | Cla-Chr10:29546651 | 3.93E-64 | dispersed | |
Cla07g01152 | Cla-Chr7:28462158 | Cla10g01892 | Cla-Chr10:34818950 | 2.08E-21 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01152 | K09874 | - | csv:101207376 | 567.0 |