Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01154 ATGGATTTTCCAATACCAGAACCATCCCCTTCTGAAACTTCAACAATCATCTCTGCTTCAGAGTCTTCTCCACCATGTCCAAAGGGGGATCGAATAACAGACCAAATTAACCCTAATTCTCAACTGGGTTTGGATCTGAGCCTTTCTAATAAAGATTCCGATCATGGGTCGAACCCAGAACTCAATCTAATCGACTGTTTCGATGTGAATTTAACAACAGAACCTACAGATACAGAAACAGAGCCCAGGGTTTTCTCTTGCAACTATTGCCAGAGGAAATTTTACAGTTCTCAAGCTCTTGGGGGACACCAAAATGCCCACAAGCGAGAGAGGACTTTAGCAAAGAGGACTCAACGGGTCGGGTCGGCCTCTAATTTCGGGCTTGCTCATCGGTATTCGAGTTTGGCTTCTCTTCCTCTTCATGGGTCGTTCAGTAGGTCGCTTGGAATTCAAGCTCATTCCATGGTTCATAAGCCTTCTTCTCTTCATGTTTCTGCAATTGGGTCATCTGGAATTTATGGTCACAGTGGATGGTCAAGGCAGCCGCTCGATCAACACCCGGCGATTGGCCGGTTGATGCAGGGAAATTCCCACGTTGGAAGTCTTAGAGGCATTTCGTCGAACACCGGAGCTGCAAGGTTTCAGGGTGTGAAGAAATTCTCTCCGGCGGCAGACACGGAGGCGCCACCGCCTCTCGGAGGGTTCTGGTGGGATGGCGGCGGTGGTGGTGGTTTTAGTCATCTGAAGATGAAGCCTAAACAAGATGAGTTGTTGAAGCTTGACTTGTCTCTTAAGCTCTAA 801 47.94 MDFPIPEPSPSETSTIISASESSPPCPKGDRITDQINPNSQLGLDLSLSNKDSDHGSNPELNLIDCFDVNLTTEPTDTETEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRTQRVGSASNFGLAHRYSSLASLPLHGSFSRSLGIQAHSMVHKPSSLHVSAIGSSGIYGHSGWSRQPLDQHPAIGRLMQGNSHVGSLRGISSNTGAARFQGVKKFSPAADTEAPPPLGGFWWDGGGGGGFSHLKMKPKQDELLKLDLSLKL 266
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 28494771 28495571 + ClCG07G012130.1 Cla07g01154 277142
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01154 266 PANTHER ZINC FINGER PROTEIN 1-LIKE 1 266 - -
Cla07g01154 266 MobiDBLite consensus disorder prediction 1 35 - -
Cla07g01154 266 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Cla07g01154 266 SUPERFAMILY beta-beta-alpha zinc fingers 81 112 IPR036236 -
Cla07g01154 266 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Cla07g01154 266 MobiDBLite consensus disorder prediction 8 22 - -
Cla07g01154 266 Gene3D Classic Zinc Finger 66 130 - -
Cla07g01154 266 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 1 266 IPR044246 GO:0009788
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01108 Cla-Chr5:11491328 Cla07g01154 Cla-Chr7:28494771 7.58E-25 dispersed
Cla05g01696 Cla-Chr5:28710268 Cla07g01154 Cla-Chr7:28494771 7.98E-26 dispersed
Cla07g01154 Cla-Chr7:28494771 Cla09g00291 Cla-Chr9:2822773 3.56E-33 dispersed
Cla01g00655 Cla-Chr1:7676874 Cla07g01154 Cla-Chr7:28494771 1.10E-28 transposed
Cla05g01119 Cla-Chr5:11716579 Cla07g01154 Cla-Chr7:28494771 3.32E-30 transposed
Cla06g01318 Cla-Chr6:26560306 Cla07g01154 Cla-Chr7:28494771 8.76E-17 transposed
Cla11g00098 Cla-Chr11:1300990 Cla07g01154 Cla-Chr7:28494771 1.39E-31 transposed
Cla11g01272 Cla-Chr11:26252998 Cla07g01154 Cla-Chr7:28494771 3.36E-21 transposed
Cla07g01154 Cla-Chr7:28494771 Cla08g01360 Cla-Chr8:26436318 2.35E-37 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61450 None None None None Cla TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01154 - - csv:101205862 429.483