Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01172 ATGCCGAAGCTGGTTTTGAAAGGGGGGAGTAGGCCTCCATGGGTTGGCTTAGCTGCTGCTGTTTGGGTTCAAATAGCTGGTGGTTCTTCTTATAACTTTTCTCTTTATTCACACTTGCTTAAATCTGTTCTGGGTTTGAATCAGCAGCAGCTTACTGTGTTGGGAGTGGCTAATGACATTGGAGAGAGTATGGGTTTGGTTCCTGGCCTTGCCTGTAACAGATTTCCTCCATGGGTTATACTTTTGTTTGGTGCTTTCTGTTGCTTTCTGGGTTATGGGGCTATTTGGCTTGCTGTTAGCAGGACTGTCCCCAATCTGCCTTATTGGCTGGTGAGTTTAATGTTTATCTTTTCCCTTTGTGAAGATCTTTCTCTCATTTTTCTATCTGTTCTCCTGGCGGCTGATTTTCATGAACTTTTTAGCAATGCATGGTTTGGAACAGCTGTGCTCGTAACCAACATGAGGAATTTCCCTCTTAGCAGAGGTACTGTTGCTGGCATTCTTAAAGGTTATGTCGGGCTTAGTGCTGCTGTATACACAGTGATATACAGTATGGTGCTGAAAAAGTCTGCTTTGAATTTACTGTTGTTTCTTGCGATCGGGATACCCATTTTGTGCTTAGCCTTGATGTACTTTGTTCGACCTTGTACTCCGGCTTCATCAGAGGATCCATCTGAGCGTGCTCATTTTCTTTTCACACAAGCTGCTTGTGTTTTGCTAGCTGTTTTTTTAGTCTCGACCACAATTCTAGATGCAACAACAACCCCTAGTGACGCCGTTGGATACACCTTAGTTGCCATAATGGTTATCCTTTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTGCAAAATCCAAAAAACTTGGCCCTCGAGTTGATTCTGCGGAACCTTTGGCTTCTGGAGAAAGCGATTCTTCCCAAATTGAACCTCTATTGACACCATCTTCCTCAGCTACAAATCTTGGAAGTTTCTGCGAGAATGATGATTCATCAGATGTAGAAACACTTCTTGCTGTGGGAGAGGGAGCGATTCATAAGAAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAAGCTCCGTGAAGCCGTAATCAAAGCTGATTTCTGGCTGCTTTGGTTCTTGTACTTCCTCGGGGTCGGTCCAGGAATAACAATTCTCAACAATTTGTCTCAAATTGGGATTTCATTAGGTGTTAATGACACAACATTGCTGTTGGCTCTTTTCAGCTTTTGCAATTTTGTCGGTCGTCTAGGCTCTGGTGTTATTTCCGAACACTTTGTCAGGTCAAGAATGATACCTCGCTCACTGTGGATGATGTTTGCACTAATACTCATGGCTATAGCATTCCTCCTGTATGCATCTGCTCTCACGGGTACTCTCTACGTCGCCACTGGTTTAACTGGAATCAGCTACGGAGTTCTGTACTCTATGATGGTCCCTCTCGCATCTGAGATTTTTGGTCTAAAGAATTTTGGAGTAATCTTCAACTTCATGCAGCTGGGGAATCCAATAGGAGCAGTCCTTTTCTCAGTTCTACTCGCCAGTACTCTATACGACAACGAAGCTGCTAAGCAAGGTTCGATAACCTGCATAGGCCAACAGTGCTTCAGGACGACTTTCTTCATCCTTTCGGGCGTTGCTGGGTTAGGTTCGATCGTGAGCATGATTCTGACTGTTAGATTAAGGCCAGTCTATCAAATGCTATACTCCGGTGGCTCGTTCCGCTTGCCTCAAAGTTCAGGTCATTGA 1758 44.08 MPKLVLKGGSRPPWVGLAAAVWVQIAGGSSYNFSLYSHLLKSVLGLNQQQLTVLGVANDIGESMGLVPGLACNRFPPWVILLFGAFCCFLGYGAIWLAVSRTVPNLPYWLVSLMFIFSLCEDLSLIFLSVLLAADFHELFSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSMVLKKSALNLLLFLAIGIPILCLALMYFVRPCTPASSEDPSERAHFLFTQAACVLLAVFLVSTTILDATTTPSDAVGYTLVAIMVILLMSPLAVPIKMTICAKSKKLGPRVDSAEPLASGESDSSQIEPLLTPSSSATNLGSFCENDDSSDVETLLAVGEGAIHKKKRRPKRGEDFKLREAVIKADFWLLWFLYFLGVGPGITILNNLSQIGISLGVNDTTLLLALFSFCNFVGRLGSGVISEHFVRSRMIPRSLWMMFALILMAIAFLLYASALTGTLYVATGLTGISYGVLYSMMVPLASEIFGLKNFGVIFNFMQLGNPIGAVLFSVLLASTLYDNEAAKQGSITCIGQQCFRTTFFILSGVAGLGSIVSMILTVRLRPVYQMLYSGGSFRLPQSSGH 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28730378 28734077 - ClCG07G012310.2 Cla07g01172 277160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01172 585 CDD MFS_Mch1p_like 12 553 - -
Cla07g01172 585 Pfam Nodulin-like 13 280 IPR010658 -
Cla07g01172 585 SUPERFAMILY MFS general substrate transporter 13 219 IPR036259 -
Cla07g01172 585 MobiDBLite consensus disorder prediction 294 318 - -
Cla07g01172 585 Gene3D MFS general substrate transporter like domains 366 568 IPR036259 -
Cla07g01172 585 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 585 - -
Cla07g01172 585 SUPERFAMILY MFS general substrate transporter 352 566 IPR036259 -
Cla07g01172 585 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 585 - -
Cla07g01172 585 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00435 Cla-Chr2:4286729 Cla07g01172 Cla-Chr7:28730378 2.81E-92 dispersed
Cla07g01172 Cla-Chr7:28730378 Cla11g00909 Cla-Chr11:15445097 2.04E-108 dispersed
Cla07g01172 Cla-Chr7:28730378 Cla02g01155 Cla-Chr2:24894424 2.20E-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01172 - - csv:101211550 1031.55