Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01184 | ATGGCCCTTCGCCCTTTCTTCTGCTGTGGAATTGGTTCGGATCGGAAAGAAAGAGGGAAGAAACAGCAAACATGGAGGGTCTTTTCGTTGAAGGAATTACACTCGGCCACAAATAATTTTAATTATGATAACAAGCTTGGAGAAGGAGGATTTGGTAGCGTTTACTGGGGTCAGCTGTGGGATGGATCACAAATAGCAGTTAAAAGGTTGAAGGTCTGGAGCAACAAAGCAGACATGGAATTTTCTGTGGAAGTTGAAATACTGGCCCGAGTTAGGCACAAGAATCTATTGAGTTTACGTGGCTACTGTGCTGAAGGGCAAGAGCGCTTGATTGTGTATGACTACATGCCCAATCTAAGTCTACTCTCCCATCTACATGGACATCACTCATCAGAATGCCATCTTGATTGGAAACGTCGTATGAAAATCGCTATTGGGTCTGCCGAGGGAATTGCCTATCTTCACCACCAAGCAACTCCACATATCATTCATCGAGACATCAAAGCTAGTAATGTTTTGCTGGATCCAGATTTCCAAGCTCGAGTAGCTGACTTTGGATTCGCAAAACTCATCCCCGATGGTGCAACACATGTAACTACAAGAGTCAAGGGCACACTCGGATACCTTGCTCCTGAATATGCTATGTTAGGTAAGGCATCAGAGAGTTGTGACGTATACAGTTTTGGCATTCTCCTGCTTGAGCTTGCTACCGGCAAGAAGCCTCTTGAGAAATTGAGTGCAACAATGAAACGCACAATCATAGATTGGGCACTACCGATTGTAGTTGAGAAAAAAATTGACGAACTTGCAGACCCGAAGCTAAATGGAGACTATAACGCAGACGAACTAAAGAGAGTCGTCCTTGTTGCGCTCTGTTGTTCCCATTCACGACCTGAGAAACGACCGACCATGCTCGAGGTGGTTGAGCTGCTAAAAGGAGAATCAAAAGAGAAGCTGGCCAAATTAGAAGATGATGAGCTGTTCAAGAGCCATCAAGTAGCTGCACAAACTACAGAAATACAAGCTGGTGAAGATAGCTCAGACTTCATATCAGAAGAAAAGGATTCAAAAGAGAAGGAGAAAGAGAATTCATCACAAAACCCCACATGA | 1110 | 44.14 | MALRPFFCCGIGSDRKERGKKQQTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFSVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGHHSSECHLDWKRRMKIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDPDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELATGKKPLEKLSATMKRTIIDWALPIVVEKKIDELADPKLNGDYNADELKRVVLVALCCSHSRPEKRPTMLEVVELLKGESKEKLAKLEDDELFKSHQVAAQTTEIQAGEDSSDFISEEKDSKEKEKENSSQNPT | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 28822190 | 28825589 | - | ClCG07G012430.1 | Cla07g01184 | 277172 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01184 | 369 | Pfam | Protein kinase domain | 41 | 308 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g01184 | 369 | PANTHER | OS01G0750732 PROTEIN | 1 | 366 | - | - | |
Cla07g01184 | 369 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 115 | - | - | |
Cla07g01184 | 369 | ProSitePatterns | Protein kinases ATP-binding region signature. | 46 | 68 | IPR017441 | GO:0005524 | |
Cla07g01184 | 369 | Gene3D | Transferase(Phosphotransferase) domain 1 | 116 | 329 | - | - | |
Cla07g01184 | 369 | ProSiteProfiles | Protein kinase domain profile. | 40 | 319 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g01184 | 369 | MobiDBLite | consensus disorder prediction | 347 | 369 | - | - | |
Cla07g01184 | 369 | MobiDBLite | consensus disorder prediction | 335 | 369 | - | - | |
Cla07g01184 | 369 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 162 | 174 | IPR008271 | GO:0004672|GO:0006468 | |
Cla07g01184 | 369 | Coils | Coil | 305 | 325 | - | - | |
Cla07g01184 | 369 | PANTHER | BNAA05G14800D PROTEIN | 1 | 366 | - | - | |
Cla07g01184 | 369 | SUPERFAMILY | Protein kinase-like (PK-like) | 23 | 311 | IPR011009 | - | |
Cla07g01184 | 369 | SMART | serkin_6 | 40 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g01184 | 369 | CDD | STKc_IRAK | 46 | 313 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02279 | Cla-Chr1:36666684 | Cla07g01184 | Cla-Chr7:28822190 | 3.25E-48 | dispersed | |
Cla03g00394 | Cla-Chr3:4515225 | Cla07g01184 | Cla-Chr7:28822190 | 3.58E-66 | dispersed | |
Cla05g00833 | Cla-Chr5:8234347 | Cla07g01184 | Cla-Chr7:28822190 | 1.29E-147 | dispersed | |
Cla06g01298 | Cla-Chr6:26329847 | Cla07g01184 | Cla-Chr7:28822190 | 3.25E-143 | dispersed | |
Cla07g01184 | Cla-Chr7:28822190 | Cla05g02353 | Cla-Chr5:35102124 | 2.21E-92 | dispersed | |
Cla11g01200 | Cla-Chr11:25119407 | Cla07g01184 | Cla-Chr7:28822190 | 8.56E-72 | dispersed | |
Cla07g01184 | Cla-Chr7:28822190 | Cla11g00221 | Cla-Chr11:2548037 | 4.96E-95 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80696 | PF00069 | Pkinase | 7.10E-45 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01184 | - | - | csv:101212993 | 684.1 |