Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01209 ATGGCGCATATTTTGCTTCATGGTACCCTTCATGTCACCATTTATGAAGTGGATAAGCTTCATTCTGGTGGTCGCAATTTCTTGAAACAGTTGGTTGAAAACGTAGAGGAGGCAGTTGGGTTTGGTCGAGGAGTAACGAGGCTATATGCAACCATTGATCTTGAGAAAGCCAGAGTTGGAAGAACAAGAAGGCTTGAGAAAGAACATTCAAACCCAAAATGGTACGAAACTTTCCATATCTACTGTGCTCATATGGCTTCCAACATCATCTTCACTGTCAAAGACGACAATCCCATTGGAGCAACCTTAATTGGCAGAGCATATTTGCCTGTTCGAGAGATCATACATGGTGAAGAAGTTGACAAATGGGTTCCAATCTTAGATGAACGTAAGAATCCCATTCGTGGGGAGCCCAAAATTCATGTCAAATTACAGTATTTCGATGTCACTAAGGATCAAAACTGGGGTCGTGGCATCAAAAGCCTCAAGTTTCCTGGCGTTCCCTACACTTATTTCTCCCAAAGACAAGGTTGTAAGGTAACTTTGTATCAAGATGCTCATGTTCCAGACAACTTTATCCCGAAAATCCCTCTTGCTGGAGGCAAGTTTTATGAGCCACATCGATGCTGGGAAGATATTTTTGATGCAATTACTAATGCTAAACACTTGATTTATATTTCTGGATGGTCTGTTTACACCGAGATTTCTTTGGTGAGAGATAGAAGAAGGCCAAAGCCTGGTGGAGATATAATGCTCGGCGAATTGCTTAAGAAAAAGGCTGGGGAAGGAGTTAGAGTTCTTTTGCTTATTTGGAATGATACAACTTCTGTTCCTATATTGAAGGAGGAGGGCTTAATGGCAACTCATGATGAAGACACTGCTAAGTACTTTGCTAATACTGATGTCCATTGTGTTTTGTGTCCTCGCAATCCTGATGATGGGGCTAATGTTATTCAAGACATTGCTGTTGGGACAATGTTCACTCACCATCAGAAGATTGTTGTGGTGGACAGTGCTTTGCCTAGTGGGGATCCTAACAGAAGGAGAATTGTTAGTTTTGTTGGTGGGATTGATCTTTGTGATGGTAGGTATGATACCCCATTTCATTCCCTTTTCAGGACTTTGGATTCTGCTCATCATGATGATTTCCATCAGCCGAACTTCGCTGGTACTTCCATAAACAAAGGTGGTCCTAGAGAGCCGTGGCACGACATCCATTCCCGCCTCGAAGGACCTGTTGCATGGGATGTTTTGTACAACTTTGAACAGAGATGGAGGAAGCAAGGTGGGAAGGATTTGCTTGTGAAATTGAGGGATTTAGATGAGATCTTCATCACTCCATCACCTGTCACGTTCCCTGATGACATCGACAGTTGGAATGTTCAAGTTTTCAGGTCTATCGATGGTGGGGCAGCTTTCGGTTTCCCCGACTCGCCTGAAGAAGCAGCAAAAGCAGGGCTGATAAGTGGAAAGGACAACACCATTGACCGAAGTATTCAAGATGCTTACATTAATGCCATTAGAAGAGCAAAGAATTTCATATACATAGAAAATCAGTATTTCCTTGGAAGCTCGTTTGACTGGAGAGGTGATGATGTGAAGCCTGAGATGATCAATGCCCTGCATCTAATCCCAAAGGAACTTTCACTTAAGATTGTGAGTAAGATTGAAGCTAGAGAGAGGTTCACAGTGTACATTGTTGTTCCAATGTGGCCTGAAGGATTTCCTGAAGGGGGAACAGTTCAAGCAATATTGGACTGGCAAAGGAGGACAATGGAAATGATGTATAAGGATATAGTTCTAGCTCTTAGAGCTAATGGCATAGAAGAGGATCCTAGAAACTATCTAACTTTCTTTTGTGTTGGGAATCGTGAAGTTAAAAAGCCTGGAGAATATGAGCCATCAGAATCACCTGAAGAAAATTCTGATTACCTTAGAGCCCAGAAATCTAGGCGCTTCATGATTTATGTTCATGCCAAGATGATGATTGTGGATGATGAATACATAATAGTGGGATCAGCCAACATCAACCAAAGATCAATGGATGGTGCAAGGGATTCAGAGATAGCAATGGGAGGTTACCAGCCATATCATTTATCAACTAGAGAGCCAGCACGAGGCCAAATCCATGGCTTCCGTTTGGCATTATGGTATGAACATTTAGGATTGCTTCATCAATCCTTCCTGTTCCCAGAAAGTGTTGAATGTGTTAAAAGAGTAAACCAACTTGCTGAAAAATATTGGGATTTATACTCAAGTGAGAGCTTTGAACATGACCTTCCTGGCCACTTGCTTCGCTACCCCATCGCCATCTCCGCTGACGGTGAAGTTACCGAGCTTCCGGGGTTCGAATACTTCCCCGACACTAAGGCGCGAGTTTTAGGTAACAAATCTAACTACCTCCCTCCAATCCTCACTACTTGA 2424 42.7 MAHILLHGTLHVTIYEVDKLHSGGRNFLKQLVENVEEAVGFGRGVTRLYATIDLEKARVGRTRRLEKEHSNPKWYETFHIYCAHMASNIIFTVKDDNPIGATLIGRAYLPVREIIHGEEVDKWVPILDERKNPIRGEPKIHVKLQYFDVTKDQNWGRGIKSLKFPGVPYTYFSQRQGCKVTLYQDAHVPDNFIPKIPLAGGKFYEPHRCWEDIFDAITNAKHLIYISGWSVYTEISLVRDRRRPKPGGDIMLGELLKKKAGEGVRVLLLIWNDTTSVPILKEEGLMATHDEDTAKYFANTDVHCVLCPRNPDDGANVIQDIAVGTMFTHHQKIVVVDSALPSGDPNRRRIVSFVGGIDLCDGRYDTPFHSLFRTLDSAHHDDFHQPNFAGTSINKGGPREPWHDIHSRLEGPVAWDVLYNFEQRWRKQGGKDLLVKLRDLDEIFITPSPVTFPDDIDSWNVQVFRSIDGGAAFGFPDSPEEAAKAGLISGKDNTIDRSIQDAYINAIRRAKNFIYIENQYFLGSSFDWRGDDVKPEMINALHLIPKELSLKIVSKIEARERFTVYIVVPMWPEGFPEGGTVQAILDWQRRTMEMMYKDIVLALRANGIEEDPRNYLTFFCVGNREVKKPGEYEPSESPEENSDYLRAQKSRRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGGYQPYHLSTREPARGQIHGFRLALWYEHLGLLHQSFLFPESVECVKRVNQLAEKYWDLYSSESFEHDLPGHLLRYPIAISADGEVTELPGFEYFPDTKARVLGNKSNYLPPILTT 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29089261 29093191 - ClCG07G012660.2 Cla07g01209 277197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01209 807 Gene3D Endonuclease Chain A 200 440 - -
Cla07g01209 807 Pfam Phospholipase D C terminal 726 797 IPR024632 -
Cla07g01209 807 Gene3D C2 domain 6 157 IPR035892 -
Cla07g01209 807 SUPERFAMILY Phospholipase D/nuclease 150 435 - -
Cla07g01209 807 PANTHER PHOSPHOLIPASE D 2 807 IPR015679 -
Cla07g01209 807 PANTHER PHOSPHOLIPASE D 2 807 - -
Cla07g01209 807 Pfam C2 domain 8 126 IPR000008 -
Cla07g01209 807 Gene3D Endonuclease Chain A 475 696 - -
Cla07g01209 807 CDD C2_plant_PLD 2 147 - -
Cla07g01209 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Cla07g01209 807 PIRSF PLD_plant 1 807 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cla07g01209 807 Pfam Phospholipase D Active site motif 654 680 IPR001736 GO:0003824
Cla07g01209 807 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Cla07g01209 807 SMART pld_4 653 680 IPR001736 GO:0003824
Cla07g01209 807 SMART pld_4 325 363 IPR001736 GO:0003824
Cla07g01209 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Cla07g01209 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Cla07g01209 807 SUPERFAMILY Phospholipase D/nuclease 497 737 - -
Cla07g01209 807 SMART C2_3c 9 123 IPR000008 -
Cla07g01209 807 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla07g01209 Cla09g00253 CCT
Cla07g01209 Cla09g00253 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01209 Cla-Chr7:29089261 Cla08g01396 Cla-Chr8:26830441 0 dispersed
Cla07g01209 Cla-Chr7:29089261 Cla08g01332 Cla-Chr8:26184202 0 wgd
Cla07g01209 Cla-Chr7:29089261 Cla09g00253 Cla-Chr9:2509973 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01209 K01115 - csv:101215246 1599.72