Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01247 ATGGATTTCTGGCCGGAATTTCTCGCTAGCAGTTGGGGAAAAGAGTTCGTCGCCGGTGGAATCGGCGGTGTCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATCCGTCAACAACACTCCACCTCCGGCTCCGCCATCAGCGTCCTCCGTAACATCATGTCCAACGGCGGCCCCGCCGCCCTCTACAGAGGAATGGGAGCTCCACTCGCTTCCGTCACTTTCCAGAACGCCATTGTTTTCCAGACCAACGCCGTGCTCTGCAGAGCGTTCGATCCAGCGGCGACAGACAACCGTCCACCGTCGTACAAGGCGGTAGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTGATTTTAACACCGGTGGAGCTCGTGAAAATCCGTCTTCAATTACAGGACTTGGGTTCATCAAATCACACAGATCTGAGTTCATCTCGGCTCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAAAGGGCTATACAGAGGCTTAACAATCACAATGCTAAGAGACGCTCCTTCCCATTGCTTTTACTTTTGGACTTACGAATTCATGAGAGAAAAGCTTCATCCCGGTTGTAGAAAATCAGGGCAAGAGACGTTGAGAACGATGCTGGTAGCCGGAGGACTCGCCGGCGTCGCCAGTTGGGTTTGTTGTTACCCATTGGATGTAGTTAAAACCAGACTTCAAGCTCAATCGAAATTCACGTTTCAAAAGTACAGTGGAATTGTGGATTGTTTCTACAAGAGCGTGAAAGAAGAAGGGTACAGTGTTTTATGGCGTGGATTAGGAACCGCCATAGCTAGAGCTTTTGTGGTGAATGGAGCCATTTTTTCTGCTTATGAACTCAGTTTGAGATGTCTATCCAACAATGGAGGATTTCATGCTGAAAATACCATTTGA 930 50.32 MDFWPEFLASSWGKEFVAGGIGGVAGIVSGYPLDTLRIRQQHSTSGSAISVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAATDNRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGSSNHTDLSSSRLGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRKSGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKFTFQKYSGIVDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLSNNGGFHAENTI 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29498031 29499510 + ClCG07G013100.1 Cla07g01247 277235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01247 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Cla07g01247 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 197 IPR018108 -
Cla07g01247 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 296 IPR018108 -
Cla07g01247 309 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 298 - -
Cla07g01247 309 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 298 - -
Cla07g01247 309 Pfam Mitochondrial carrier protein 212 299 IPR018108 -
Cla07g01247 309 Pfam Mitochondrial carrier protein 109 198 IPR018108 -
Cla07g01247 309 Pfam Mitochondrial carrier protein 11 91 IPR018108 -
Cla07g01247 309 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Cla07g01247 309 PRINTS Mitochondrial carrier protein signature 118 136 IPR002067 GO:0055085
Cla07g01247 309 PRINTS Mitochondrial carrier protein signature 170 188 IPR002067 GO:0055085
Cla07g01247 309 PRINTS Mitochondrial carrier protein signature 217 239 IPR002067 GO:0055085
Cla07g01247 309 SUPERFAMILY Mitochondrial carrier 11 291 IPR023395 -
Cla07g01247 309 Gene3D Mitochondrial carrier domain 9 304 IPR023395 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla07g01247 Cla09g00190 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01247 Cla-Chr7:29498031 Cla09g01136 Cla-Chr9:12725180 6.29E-56 dispersed
Cla10g02108 Cla-Chr10:36769276 Cla07g01247 Cla-Chr7:29498031 5.57E-13 transposed
Cla07g01247 Cla-Chr7:29498031 Cla09g00190 Cla-Chr9:1899539 5.64E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01247 K15109 - csv:101222749 602.823