Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01261 | ATGGCGGAACCAAACAATTGGAATTCAGAATCTGAAAGTACAGAAATGAAAAGGGGAAAACAGACGGATCGAGAACAGAGAGATCAGAAACACCCAATTTACAGAGGCGTACGGAGAAGGAGTTGGGGTAAATGGGTGTCGGAGATCCGGCAGCCGAGGAAGAAGTCTCGGATTTGGCTTGGGACTTTCACGACGGCGGAGATGGCAGCGCGTGCACACGACGTGGCGGCGCTCAGCATCAAAGGTGATTCAGCAAAGGCCATTCTCAATTTCCCTCAACTCGCTGGTTTGCTTCCACGGCCGGTGTCCTTAATGCCGAGGGATATTCAGGAGGCGGCTGCCAAGGCGGCGGCCATGGTCGATTTCGATTCCACTACGGCGTCGTTTTCGTCGTTTAATGATGAAGAAGGGTCAGAGGAATTGGGGGAGATTGTGGAATTGCCCAATATTGAAGAAGATATCAGAGCTGAGTCGTGGAACGAGTTCGAGTTCATTGACTCGGTTGATTGGTGGGGAAATCCGCCGTTTGCGGCCGGGGAATTGGATTTCTGTGCGGTGTTTTCAGATCAGAGTACTACTCCGGTTACCTTCGACGGCGGCGATTGGGAGTGA | 612 | 52.12 | MAEPNNWNSESESTEMKRGKQTDREQRDQKHPIYRGVRRRSWGKWVSEIRQPRKKSRIWLGTFTTAEMAARAHDVAALSIKGDSAKAILNFPQLAGLLPRPVSLMPRDIQEAAAKAAAMVDFDSTTASFSSFNDEEGSEELGEIVELPNIEEDIRAESWNEFEFIDSVDWWGNPPFAAGELDFCAVFSDQSTTPVTFDGGDWE | 203 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 29684996 | 29685607 | - | ClCG07G013270.2 | Cla07g01261 | 277249 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01261 | 203 | Pfam | AP2 domain | 32 | 82 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g01261 | 203 | ProSiteProfiles | AP2/ERF domain profile. | 33 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g01261 | 203 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 12 | 197 | - | - | |
Cla07g01261 | 203 | SMART | rav1_2 | 33 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g01261 | 203 | MobiDBLite | consensus disorder prediction | 13 | 32 | - | - | |
Cla07g01261 | 203 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR TINY-LIKE | 12 | 197 | - | - | |
Cla07g01261 | 203 | SUPERFAMILY | DNA-binding domain | 33 | 93 | IPR016177 | GO:0003677 | |
Cla07g01261 | 203 | CDD | AP2 | 32 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g01261 | 203 | PRINTS | Ethylene responsive element binding protein signature | 34 | 45 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g01261 | 203 | PRINTS | Ethylene responsive element binding protein signature | 56 | 72 | IPR001471 | GO:0003700|GO:0006355 | |
Cla07g01261 | 203 | Gene3D | AP2/ERF domain | 33 | 93 | IPR036955 | GO:0003700|GO:0006355 | |
Cla07g01261 | 203 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01261 | Cla-Chr7:29684996 | Cla11g01484 | Cla-Chr11:28476465 | 3.60E-49 | dispersed | |
Cla11g00204 | Cla-Chr11:2372697 | Cla07g01261 | Cla-Chr7:29684996 | 7.38E-46 | wgd | |
Cla07g01261 | Cla-Chr7:29684996 | Cla09g00162 | Cla-Chr9:1696022 | 2.92E-51 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61458 | PF00847 | AP2 | 9.40E-14 | CL0081 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01261 | K09286 | - | csv:101222354 | 363.229 |