Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01267 ATGATCACTCATCGCTTTTACCCAAAAACAAATGCCTCTGTTTACAGTTTTTTCACTTCTTCAACCCACCTTAGCTCCCTTCTGTTTACAGCTCATTTTCTTCTTCCTCCTTCCCTTATTATTCTTTTCCCAATTTTAGCACACCTTTTCTTCCTTCAACTCTCTTCATTTTCCATCCTTTTCACCTTCAAATCTTCCTGTTTCGTACAAATCTTCACTTTATTCATTCATTCACCATCTGGGTCTTCGCCTTTTTGCACTTACAACTTGCCCATCTCTCTAAATTCTATGTTTTGGTCAATGAATCCTGTACGAATTCGCAGTTTGTTCTTCCTTCTATACTTCGCTGTTCTTCTTCAAGATCATTCCCTCTGTTCTTCTTATCCCACGCCCTTGAATTGTACGGACACAACCCGTTTATGTACCTCGTTTTTGGCCTTCAAGCCTCAGCCAAATCAGACACTTTCTGTGATCCAGAGCATGTTCGACGTATTGCCTGAAGATGTAACTGTGGAAGGCAATGGTCAGGACTATGTGTTCATCAGGAAGAACTGTTCCTGTGCCTCTGGGTTGAAGAAATACATAACCAACACCACTTTTACCATCAAATCCAATCACGGTCATGTATATGATATAGTCATGGAAGCGTATGATGGGCTTGCGTTGTTGCCCAACACAACCCGAATGGCGAGGAACGGCGCTGTTGTGTCTTTGAGATTGTTTTGTGCTTGTTCAAGCGGGTTGTGGAACTATTTGATGAGCTATGTGATGAGAGATGGTGACACCATAGAGTCTTTGGCTAGCCGATTTGGGGTTAGTATGGATAGCATTGAGTCGGTGAATGGAATTGAAAATCCCGGCAATGTCACGGTGGGTGCTTTGTATTATGTTCCCTTGAATTCGGTTCCTGGCGATCCTTATCCGTTGGAGACAGACATTTCTCCTGCTCCTACTCCAGCTCCTTCCTATACTCAGAACAATTTCTCAGATAATGCTCAGAACCCCAAGCGTCATCCTCCATATATATGGATTGTTGGAAGTTTGGGAATTATTCTTGTTCTGATTTTGGTAGGCATAGTAGGTTATGCTTGCTTCAGGTGGTTGAAGTGCTTTTCTAGATCAAGGAGTAGCCACTCCAAAGATCCCGGTGGCAAGGTTTCCCACAAGTTCCATATTCTTGGGAAGTCAAGTTTCTGCTGTGCTTCAGGAAGGTATATTTGCTGCAGTTCTGCTGATTGGAAGCAAGCCAATGGGGAATCTACCGACAACCAGAGTGCAATTCCAAAAGCTATCGAGAGTAATGTATTTGATGTAGACAAACCTGTGGTTTTTTCATGCGAAGAAATTTTTTCCTCAACTGATAGTTTCTCTGATTCAAGTCTACTTGGCCATGGAACTTATGGTTCAGTGTATTATGGCATCCTGCGTGACCAGGAAGTTGCTATAAAAAGAATGACTGCAACAAAAACTAAAGAGTTTATGGCAGAGATGAAAGTCCTCTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGTTATGCAGCCAGTGAGGAGGAGCTTTTTCTTATTTATGAATATGCTCAAAAAGGTCCCCTCAAAAACCATTTGCATGATCCTCTGAACAAGGGTCATACACCACTATCTTGGATTATGAGACTCCAAATTGCTTTGGACGCTGCGAGGGGTCTTGAATACATTCACGAGCATACTAAAACTCATTATGTTCATAGAGATATCAAGACAAGCAACATCTTACTTGATGGTTCTTTTAGGGCAAAGATTTCTGACTTTGGGTTGGCCAAACTTGTTGGAAAAACAAATGAGGGTGAAGCTACAGTAACGAAAGTTGTTGGCACATACGGCTATTTGGCTCCTGAATATTTGAGTAACGGTCTTGCGACAACCAAAAGTGATGTGTATGCTTATGGTGTCGTTCTTTTTGAGCTTATATCTGGAAAGGAGGCAATTATACGAACTGAGGGAACAACTATGAAAAATCCTGAAAGACGTTCACTGGCATCCATTATGTTAGCTGTTCTTCGGAATGCACCTGATCCTATGAATATGGCAAGTCTAAAAGATCAAGTTGATCCAAGTATGATGGATTTGTATCCTCATGACTGTCTATTTAAGGTGGCCATGTTGGCAAAGCAGTGTGTGGATGAGGATTCAATCTTACGACCCGACATGAAGCAAGTCGTAATATCCTTATCACAGATCCTACTCTCTTCGATTGAGTGGGAAGCGACTCTAGCTGGTAACAGCCAAGTTTTTAGTGGTCTTGTCCAAGGAAGATAG 2301 41.89 MITHRFYPKTNASVYSFFTSSTHLSSLLFTAHFLLPPSLIILFPILAHLFFLQLSSFSILFTFKSSCFVQIFTLFIHSPSGSSPFCTYNLPISLNSMFWSMNPVRIRSLFFLLYFAVLLQDHSLCSSYPTPLNCTDTTRLCTSFLAFKPQPNQTLSVIQSMFDVLPEDVTVEGNGQDYVFIRKNCSCASGLKKYITNTTFTIKSNHGHVYDIVMEAYDGLALLPNTTRMARNGAVVSLRLFCACSSGLWNYLMSYVMRDGDTIESLASRFGVSMDSIESVNGIENPGNVTVGALYYVPLNSVPGDPYPLETDISPAPTPAPSYTQNNFSDNAQNPKRHPPYIWIVGSLGIILVLILVGIVGYACFRWLKCFSRSRSSHSKDPGGKVSHKFHILGKSSFCCASGRYICCSSADWKQANGESTDNQSAIPKAIESNVFDVDKPVVFSCEEIFSSTDSFSDSSLLGHGTYGSVYYGILRDQEVAIKRMTATKTKEFMAEMKVLCKVHHANLVELIGYAASEEELFLIYEYAQKGPLKNHLHDPLNKGHTPLSWIMRLQIALDAARGLEYIHEHTKTHYVHRDIKTSNILLDGSFRAKISDFGLAKLVGKTNEGEATVTKVVGTYGYLAPEYLSNGLATTKSDVYAYGVVLFELISGKEAIIRTEGTTMKNPERRSLASIMLAVLRNAPDPMNMASLKDQVDPSMMDLYPHDCLFKVAMLAKQCVDEDSILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29757223 29762509 - ClCG07G013330.1 Cla07g01267 277255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01267 766 Pfam Protein tyrosine and serine/threonine kinase 461 736 IPR001245 GO:0004672|GO:0006468
Cla07g01267 766 Pfam LysM domain 255 292 IPR018392 -
Cla07g01267 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 575 587 IPR008271 GO:0004672|GO:0006468
Cla07g01267 766 Gene3D LysM domain 252 298 IPR036779 -
Cla07g01267 766 SMART LysM_2 254 298 IPR018392 -
Cla07g01267 766 SUPERFAMILY LysM domain 253 298 IPR036779 -
Cla07g01267 766 CDD LysM 254 297 IPR018392 -
Cla07g01267 766 ProSiteProfiles Protein kinase domain profile. 456 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01267 766 ProSitePatterns Protein kinases ATP-binding region signature. 462 483 IPR017441 GO:0005524
Cla07g01267 766 SMART serkin_6 456 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01267 766 SUPERFAMILY Protein kinase-like (PK-like) 438 738 IPR011009 -
Cla07g01267 766 Gene3D Transferase(Phosphotransferase) domain 1 529 752 - -
Cla07g01267 766 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 132 766 IPR044812 GO:0019199|GO:0045087
Cla07g01267 766 ProSiteProfiles LysM domain profile. 253 297 IPR018392 -
Cla07g01267 766 Gene3D Phosphorylase Kinase; domain 1 428 527 - -
Cla07g01267 766 PANTHER BNAA06G02020D PROTEIN 132 766 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g02574 Cla-Chr5:36971065 Cla07g01267 Cla-Chr7:29757223 1.94E-118 dispersed
Cla07g01267 Cla-Chr7:29757223 Cla05g02353 Cla-Chr5:35102124 1.76E-61 dispersed
Cla07g01267 Cla-Chr7:29757223 Cla11g00221 Cla-Chr11:2548037 1.66E-62 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80698 PF07714 PK_Tyr_Ser-Thr 1.80E-48 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01267 - - csv:101213624 1266.14