Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01296 | ATGAGTCGGGAGCAGAAGCGGGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTGGTTTGGGCGTTGACTCATGTTGTTCAAATAGGAGATTGCATAACTCTGCTGGTTGTTGTCCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTTCCGAGATTTGCTGGGGATTGTGCAAGTGGTCACAAGAAAGCTCATTCTGGAACAAGCTCGGAGCTGAAATGTGATATTACCGATTCCTGTTCGCAGATGATCCTTCAGCTTCATGATGTTTATGATCCAAATAAGATAAATGTGAAAATTAAAATTGTTTCGGGGTCGCCAAGTGGGTCTGTAGCTGCTGAGGCCAAGAGAGCTCAAGCTAGCTGGGTTGTATTAGACAAACAGCTCAAACACGAGGAGAAATGTTGCATGGAAGAGTTACAGTGCAACATTGTGGTAATGAAGCGATCACAACCGAAAGTTCTTCGTTTGAACCTGGTTGGGTCTCCAAAGAAGGAACAAGAAGTGCCCTCTCCGTCACCTTCTGATATAGATGAAGGGTCTGAAAGCCATCAAAAAGAAAATAATGATCCTCTAGATTTCATACGGGGACCAGTTGTGACCCCCAGTAGCAGCCCAGAGTTGGGCACACCTTTTACTGTTACCGAAGCTGGAACATCATCAGTGTCAAGCTCAGATCCTGGAACTTCACCATTTTTTAACTCTGAAATGAATGGAGACACAAAGAAGGAGGAATTGTTTGTTATAAAGGAAAATAAAGAACTTGATGCTGCTAGTTCAGACTCGGATATTGAGAATTTATCTGTATCTTCTGCGAGTTTAAGATTCCAACCATGGATGACAGAGTTTCTAAGTTCTCATCTTCAATCCTCACAACACATAAGTGGAAGGTCACAGAGATGTGATGACATGAATCAAGTGTCAACAAGAAAATCTTTTCTACCAAAGTCTTCTAAACTTGACAGAGAATCAAGCATTGGAATGTCAAGCCATAGAAGTGACAATGATTTTCATGGAGATGTACGAGATGCAGTTTCATTATCCCGGAACACACCACCAGGCCCTCCTCCATTATGTTCAATATGCCAACACAAGGCACCAGTTTTTGGAAAGCCTCCAAGGTGGTTTAGCTATGCTGAGCTGGAGCTTGCTACTGGTGGATTTTCACAAGCCAACTTTTTGGCTGAAGGAGGATATGGATCTGTTCACAGAGGGGTACTCCCAGATGGACAGGTGGTCGCCGTCAAGCAGCACAAACTAGCTAGTTCTCAGGGAGACCTTGAATTTTGTTCAGAAGTCGAAGTTCTTAGCTGTGCACAACATCGAAACGTTGTTATGTTGATTGGCTTTTGTATAGAGGAGAAGAGAAGGTTGTTGGTGTATGAATACATCTGCAATGGTTCACTGGATTCTCATTTATATGGACGCCAACAAGAGCCACTAGAATGGTCTGCACGGCAAAAAATTGCTGTGGGAGCTGCAAGGGGGCTACGATATCTCCATGAAGAATGTAGAGTGGGTTGCATTGTTCACCGGGATATGCGGCCAAACAACATTCTTATCACCCATGATTTTGAACCACTAGTTGGAGATTTTGGCCTTGCAAGGTGGCAGCCGGACGGAGATACCGGTGTTGAAACAAGAGTTATTGGAACATTTGGGTATTTGGCTCCAGAGTATGCTCAAAGTGGCCAAATCACAGAAAAAGCGGATGTTTATTCCTTTGGGGTGGTACTGGTGGAGCTAATTACTGGAAGAAAAGCCGTAGACCTTAGTCGGCCGAAAGGTCAACAGTGTCTCACTGAATGGGCGCGCCCCTTGTTGGATGAATTTCTTATTGATGAACTGATTGATCCGAGGTTGGGAAATAACTTTGCAGAGCATGAAGTGTACTGCATGCTGCATGCCGCATCGTTATGCATCCGAAGAGATCCTAACGCAAGGCCTCGTATGTCACAGAATAACAATGTGGAATTAGTTCAACACAACTTCAATGAGGTAGAAATAAGAAATGCTAAAAGCGACCTCGTCATGGACGCTAATTACTTGTCAACTCCTGGATACGATATGGGAAATCGGAGTGGTCGGATGTGGACCGATCAGCAGCAGCAGCAGCAGCAGCAGCAAAACTACAGTGGCTCATTATCAGATGAGACTCTAGAGAGGTTCAATGAAAAAGTCTGTGTTGAGAGTTTAAGACCAGTAGCAGTATTAGTAAGTGGAAAAATATGGTGGGACAAGGTACCGATGGATGTTTGGACAGGCCAGTTGGACCAAATCATGAAAACAAAAGATTTCGTATATCAAATGATTAAACGAGGATATTTGAAATCAAGATCATATAACAATACAAAATTTGAAAATGAACCTAAAAAAGTACTAATGGATTCCGATAAGCGATTAAGATCCAGGCGCGATCAATCCAGTATCTTCTTCATCCAAGTAAAGATTGTCGGTCTTCCTGACGGCGGCGTGCGCCAAAACGAGGGCGGCGGCGACGAGCAGAGCGATGAGAATGTTGAGTGTGGCGTTGGTCAAGAACAAGAATCCGATGGTGAGAAGGGAGAGAATGAGGAGAATGATCCAATCTTCGAGGACGCGGCCGGCGAGAATGAGAGGCTGATCGCGGAGGAAGTAGAGGAAGAGCCAGAGAGACAACATGAGGAAGAGGACGAGGAGGGAAATCGGGTGCCAGAGAAGGGCGAGGAAGAGGATTACGAGGACGACGATGGCGTAGTTCATACGGAAGTAAGCGAGATTGATTTTGATGCGAGCGAGAGTGTCGTGGAGGTTGGAAGGGAGAGTGAAGGAGCGGTAATCGGCGATCACACGCCACGGACGGCGGTGCCCTAG | 2904 | 45.14 | MSREQKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSELKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPSGSVAAEAKRAQASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEQEVPSPSPSDIDEGSESHQKENNDPLDFIRGPVVTPSSSPELGTPFTVTEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKELDAASSDSDIENLSVSSASLRFQPWMTEFLSSHLQSSQHISGRSQRCDDMNQVSTRKSFLPKSSKLDRESSIGMSSHRSDNDFHGDVRDAVSLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLDEFLIDELIDPRLGNNFAEHEVYCMLHAASLCIRRDPNARPRMSQNNNVELVQHNFNEVEIRNAKSDLVMDANYLSTPGYDMGNRSGRMWTDQQQQQQQQQNYSGSLSDETLERFNEKVCVESLRPVAVLVSGKIWWDKVPMDVWTGQLDQIMKTKDFVYQMIKRGYLKSRSYNNTKFENEPKKVLMDSDKRLRSRRDQSSIFFIQVKIVGLPDGGVRQNEGGGDEQSDENVECGVGQEQESDGEKGENEENDPIFEDAAGENERLIAEEVEEEPERQHEEEDEEGNRVPEKGEEEDYEDDDGVVHTEVSEIDFDASESVVEVGRESEGAVIGDHTPRTAVP | 967 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 30096135 | 30104381 | + | ClCG07G013660.2 | Cla07g01296 | 277284 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01296 | 967 | PANTHER | KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN | 15 | 724 | - | - | |
Cla07g01296 | 967 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 526 | 538 | IPR008266 | GO:0004672|GO:0006468 | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 175 | 255 | - | - | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 329 | 356 | - | - | |
Cla07g01296 | 967 | SUPERFAMILY | Protein kinase-like (PK-like) | 389 | 681 | IPR011009 | - | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 883 | 898 | - | - | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 912 | 929 | - | - | |
Cla07g01296 | 967 | ProSiteProfiles | Protein kinase domain profile. | 405 | 682 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g01296 | 967 | Gene3D | Phosphorylase Kinase; domain 1 | 377 | 480 | - | - | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 930 | 957 | - | - | |
Cla07g01296 | 967 | CDD | USP_Like | 19 | 142 | - | - | |
Cla07g01296 | 967 | Gene3D | Transferase(Phosphotransferase) domain 1 | 481 | 686 | - | - | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 342 | 356 | - | - | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 712 | 731 | - | - | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 711 | 731 | - | - | |
Cla07g01296 | 967 | PANTHER | OS01G0253100 PROTEIN | 15 | 724 | IPR045271 | GO:0004714|GO:0006468 | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 220 | 254 | - | - | |
Cla07g01296 | 967 | Pfam | Protein tyrosine and serine/threonine kinase | 409 | 605 | IPR001245 | GO:0004672|GO:0006468 | |
Cla07g01296 | 967 | Gene3D | HUPs | 3 | 151 | IPR014729 | - | |
Cla07g01296 | 967 | CDD | STKc_IRAK | 411 | 670 | - | - | |
Cla07g01296 | 967 | MobiDBLite | consensus disorder prediction | 839 | 967 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01296 | Cla-Chr7:30096135 | Cla11g00221 | Cla-Chr11:2548037 | 1.66E-94 | dispersed | |
Cla05g01971 | Cla-Chr5:31514001 | Cla07g01296 | Cla-Chr7:30096135 | 0 | transposed | |
Cla08g00648 | Cla-Chr8:18679207 | Cla07g01296 | Cla-Chr7:30096135 | 3.62E-99 | transposed | |
Cla08g00974 | Cla-Chr8:22397946 | Cla07g01296 | Cla-Chr7:30096135 | 1.39E-10 | transposed | |
Cla09g00056 | Cla-Chr9:546707 | Cla07g01296 | Cla-Chr7:30096135 | 5.60E-14 | transposed | |
Cla11g01267 | Cla-Chr11:26191783 | Cla07g01296 | Cla-Chr7:30096135 | 1.09E-93 | transposed | |
Cla03g01510 | Cla-Chr3:30698263 | Cla07g01296 | Cla-Chr7:30096135 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80701 | PF07714 | PK_Tyr_Ser-Thr | 9.00E-40 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01296 | - | - | csv:101206876 | 1402.88 |