Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01296 ATGAGTCGGGAGCAGAAGCGGGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTGGTTTGGGCGTTGACTCATGTTGTTCAAATAGGAGATTGCATAACTCTGCTGGTTGTTGTCCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTTCCGAGATTTGCTGGGGATTGTGCAAGTGGTCACAAGAAAGCTCATTCTGGAACAAGCTCGGAGCTGAAATGTGATATTACCGATTCCTGTTCGCAGATGATCCTTCAGCTTCATGATGTTTATGATCCAAATAAGATAAATGTGAAAATTAAAATTGTTTCGGGGTCGCCAAGTGGGTCTGTAGCTGCTGAGGCCAAGAGAGCTCAAGCTAGCTGGGTTGTATTAGACAAACAGCTCAAACACGAGGAGAAATGTTGCATGGAAGAGTTACAGTGCAACATTGTGGTAATGAAGCGATCACAACCGAAAGTTCTTCGTTTGAACCTGGTTGGGTCTCCAAAGAAGGAACAAGAAGTGCCCTCTCCGTCACCTTCTGATATAGATGAAGGGTCTGAAAGCCATCAAAAAGAAAATAATGATCCTCTAGATTTCATACGGGGACCAGTTGTGACCCCCAGTAGCAGCCCAGAGTTGGGCACACCTTTTACTGTTACCGAAGCTGGAACATCATCAGTGTCAAGCTCAGATCCTGGAACTTCACCATTTTTTAACTCTGAAATGAATGGAGACACAAAGAAGGAGGAATTGTTTGTTATAAAGGAAAATAAAGAACTTGATGCTGCTAGTTCAGACTCGGATATTGAGAATTTATCTGTATCTTCTGCGAGTTTAAGATTCCAACCATGGATGACAGAGTTTCTAAGTTCTCATCTTCAATCCTCACAACACATAAGTGGAAGGTCACAGAGATGTGATGACATGAATCAAGTGTCAACAAGAAAATCTTTTCTACCAAAGTCTTCTAAACTTGACAGAGAATCAAGCATTGGAATGTCAAGCCATAGAAGTGACAATGATTTTCATGGAGATGTACGAGATGCAGTTTCATTATCCCGGAACACACCACCAGGCCCTCCTCCATTATGTTCAATATGCCAACACAAGGCACCAGTTTTTGGAAAGCCTCCAAGGTGGTTTAGCTATGCTGAGCTGGAGCTTGCTACTGGTGGATTTTCACAAGCCAACTTTTTGGCTGAAGGAGGATATGGATCTGTTCACAGAGGGGTACTCCCAGATGGACAGGTGGTCGCCGTCAAGCAGCACAAACTAGCTAGTTCTCAGGGAGACCTTGAATTTTGTTCAGAAGTCGAAGTTCTTAGCTGTGCACAACATCGAAACGTTGTTATGTTGATTGGCTTTTGTATAGAGGAGAAGAGAAGGTTGTTGGTGTATGAATACATCTGCAATGGTTCACTGGATTCTCATTTATATGGACGCCAACAAGAGCCACTAGAATGGTCTGCACGGCAAAAAATTGCTGTGGGAGCTGCAAGGGGGCTACGATATCTCCATGAAGAATGTAGAGTGGGTTGCATTGTTCACCGGGATATGCGGCCAAACAACATTCTTATCACCCATGATTTTGAACCACTAGTTGGAGATTTTGGCCTTGCAAGGTGGCAGCCGGACGGAGATACCGGTGTTGAAACAAGAGTTATTGGAACATTTGGGTATTTGGCTCCAGAGTATGCTCAAAGTGGCCAAATCACAGAAAAAGCGGATGTTTATTCCTTTGGGGTGGTACTGGTGGAGCTAATTACTGGAAGAAAAGCCGTAGACCTTAGTCGGCCGAAAGGTCAACAGTGTCTCACTGAATGGGCGCGCCCCTTGTTGGATGAATTTCTTATTGATGAACTGATTGATCCGAGGTTGGGAAATAACTTTGCAGAGCATGAAGTGTACTGCATGCTGCATGCCGCATCGTTATGCATCCGAAGAGATCCTAACGCAAGGCCTCGTATGTCACAGAATAACAATGTGGAATTAGTTCAACACAACTTCAATGAGGTAGAAATAAGAAATGCTAAAAGCGACCTCGTCATGGACGCTAATTACTTGTCAACTCCTGGATACGATATGGGAAATCGGAGTGGTCGGATGTGGACCGATCAGCAGCAGCAGCAGCAGCAGCAGCAAAACTACAGTGGCTCATTATCAGATGAGACTCTAGAGAGGTTCAATGAAAAAGTCTGTGTTGAGAGTTTAAGACCAGTAGCAGTATTAGTAAGTGGAAAAATATGGTGGGACAAGGTACCGATGGATGTTTGGACAGGCCAGTTGGACCAAATCATGAAAACAAAAGATTTCGTATATCAAATGATTAAACGAGGATATTTGAAATCAAGATCATATAACAATACAAAATTTGAAAATGAACCTAAAAAAGTACTAATGGATTCCGATAAGCGATTAAGATCCAGGCGCGATCAATCCAGTATCTTCTTCATCCAAGTAAAGATTGTCGGTCTTCCTGACGGCGGCGTGCGCCAAAACGAGGGCGGCGGCGACGAGCAGAGCGATGAGAATGTTGAGTGTGGCGTTGGTCAAGAACAAGAATCCGATGGTGAGAAGGGAGAGAATGAGGAGAATGATCCAATCTTCGAGGACGCGGCCGGCGAGAATGAGAGGCTGATCGCGGAGGAAGTAGAGGAAGAGCCAGAGAGACAACATGAGGAAGAGGACGAGGAGGGAAATCGGGTGCCAGAGAAGGGCGAGGAAGAGGATTACGAGGACGACGATGGCGTAGTTCATACGGAAGTAAGCGAGATTGATTTTGATGCGAGCGAGAGTGTCGTGGAGGTTGGAAGGGAGAGTGAAGGAGCGGTAATCGGCGATCACACGCCACGGACGGCGGTGCCCTAG 2904 45.14 MSREQKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSELKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPSGSVAAEAKRAQASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEQEVPSPSPSDIDEGSESHQKENNDPLDFIRGPVVTPSSSPELGTPFTVTEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKELDAASSDSDIENLSVSSASLRFQPWMTEFLSSHLQSSQHISGRSQRCDDMNQVSTRKSFLPKSSKLDRESSIGMSSHRSDNDFHGDVRDAVSLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLDEFLIDELIDPRLGNNFAEHEVYCMLHAASLCIRRDPNARPRMSQNNNVELVQHNFNEVEIRNAKSDLVMDANYLSTPGYDMGNRSGRMWTDQQQQQQQQQNYSGSLSDETLERFNEKVCVESLRPVAVLVSGKIWWDKVPMDVWTGQLDQIMKTKDFVYQMIKRGYLKSRSYNNTKFENEPKKVLMDSDKRLRSRRDQSSIFFIQVKIVGLPDGGVRQNEGGGDEQSDENVECGVGQEQESDGEKGENEENDPIFEDAAGENERLIAEEVEEEPERQHEEEDEEGNRVPEKGEEEDYEDDDGVVHTEVSEIDFDASESVVEVGRESEGAVIGDHTPRTAVP 967
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30096135 30104381 + ClCG07G013660.2 Cla07g01296 277284

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01296 967 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 724 - -
Cla07g01296 967 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672|GO:0006468
Cla07g01296 967 MobiDBLite consensus disorder prediction 175 255 - -
Cla07g01296 967 MobiDBLite consensus disorder prediction 329 356 - -
Cla07g01296 967 SUPERFAMILY Protein kinase-like (PK-like) 389 681 IPR011009 -
Cla07g01296 967 MobiDBLite consensus disorder prediction 883 898 - -
Cla07g01296 967 MobiDBLite consensus disorder prediction 912 929 - -
Cla07g01296 967 ProSiteProfiles Protein kinase domain profile. 405 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01296 967 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Cla07g01296 967 MobiDBLite consensus disorder prediction 930 957 - -
Cla07g01296 967 CDD USP_Like 19 142 - -
Cla07g01296 967 Gene3D Transferase(Phosphotransferase) domain 1 481 686 - -
Cla07g01296 967 MobiDBLite consensus disorder prediction 342 356 - -
Cla07g01296 967 MobiDBLite consensus disorder prediction 712 731 - -
Cla07g01296 967 MobiDBLite consensus disorder prediction 711 731 - -
Cla07g01296 967 PANTHER OS01G0253100 PROTEIN 15 724 IPR045271 GO:0004714|GO:0006468
Cla07g01296 967 MobiDBLite consensus disorder prediction 220 254 - -
Cla07g01296 967 Pfam Protein tyrosine and serine/threonine kinase 409 605 IPR001245 GO:0004672|GO:0006468
Cla07g01296 967 Gene3D HUPs 3 151 IPR014729 -
Cla07g01296 967 CDD STKc_IRAK 411 670 - -
Cla07g01296 967 MobiDBLite consensus disorder prediction 839 967 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01296 - - - csv:101206876 1402.88
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01296 Cla-Chr7:30096135 Cla11g00221 Cla-Chr11:2548037 1.66E-94 dispersed
Cla05g01971 Cla-Chr5:31514001 Cla07g01296 Cla-Chr7:30096135 0 transposed
Cla08g00648 Cla-Chr8:18679207 Cla07g01296 Cla-Chr7:30096135 3.62E-99 transposed
Cla08g00974 Cla-Chr8:22397946 Cla07g01296 Cla-Chr7:30096135 1.39E-10 transposed
Cla09g00056 Cla-Chr9:546707 Cla07g01296 Cla-Chr7:30096135 5.60E-14 transposed
Cla11g01267 Cla-Chr11:26191783 Cla07g01296 Cla-Chr7:30096135 1.09E-93 transposed
Cla03g01510 Cla-Chr3:30698263 Cla07g01296 Cla-Chr7:30096135 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi9g193 . . . . . . Bma10g00748 Bma13g01236 . . Cma01g00070 Cma14g01270 Car01g00056 Car14g01122 . . . Bhi01g03330 . . . . . . Cla07g01296 . . . . . . Cone20ag1297 Cone17ag0111 Cone7ag1209 . . . Chy04g00641 . . . . Bda12g01075 . . . . . Cmo01g00071 Cmo14g01304 . . . . Cpe02g01719 Cpe03g01074 . . . . . . . . . . . . . . Lsi07g00562 Csa03g04090 . Cme04g01192
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla11g00230 CCT 146 498 Trihelix Transcription Factor Family AT1G12040 65.1 2.6e-44 177.6
Cla05g00515 . 38 363 Trihelix Transcription Factor Family AT1G12040 58.8 7.4e-39 159.5
Cla06g01020 CCT 54 228 Trihelix Transcription Factor Family AT1G12040 63.4 6.9e-37 152.9
Cla11g00230 CCT 128 503 Trihelix Transcription Factor Family AT4G18670 80.4 6.3e-66 249.6
Cla06g01020 CCT 33 401 Trihelix Transcription Factor Family AT4G18670 81.6 3.4e-64 243.8
Cla06g00331 . 26 219 Trihelix Transcription Factor Family AT4G18670 58.5 1.1e-38 159.1
Cla05g00515 . 32 365 Trihelix Transcription Factor Family AT4G18670 64.5 1.0e-36 152.5
Cla06g00331 . 9 414 Trihelix Transcription Factor Family AT3G19020 62.0 7.1e-55 213.0
Cla06g01020 CCT 35 399 Trihelix Transcription Factor Family AT3G19020 73.6 1.5e-41 168.7
Cla11g00230 CCT 123 320 Trihelix Transcription Factor Family AT3G19020 69.5 1.1e-39 162.5
Cla05g01996 . 70 227 Trihelix Transcription Factor Family AT3G19020 74.1 3.3e-36 151.0
Cla06g00331 . 62 395 Trihelix Transcription Factor Family AT1G49490 66.1 2.3e-44 177.9
Cla06g01020 CCT 65 402 Trihelix Transcription Factor Family AT1G49490 74.0 1.2e-40 165.6
Cla11g00230 CCT 157 489 Trihelix Transcription Factor Family AT1G49490 73.3 1.5e-40 165.2
Cla06g00331 . 25 395 Trihelix Transcription Factor Family AT2G15880 66.5 3.9e-61 233.4
Cla06g01020 CCT 35 406 Trihelix Transcription Factor Family AT2G15880 67.3 1.6e-41 168.3
Cla11g00230 CCT 128 489 Trihelix Transcription Factor Family AT2G15880 66.3 3.8e-40 163.7
Cla06g00331 . 1 400 Trihelix Transcription Factor Family AT4G33970 63.2 1.9e-57 221.1
Cla06g01020 CCT 35 402 Trihelix Transcription Factor Family AT4G33970 67.5 2.5e-36 151.0
Cla08g01699 . 1 196 Trihelix Transcription Factor Family AT1G13450 63.3 4.4e-67 251.5
Cla10g02096 CCT 50 301 Trihelix Transcription Factor Family AT5G01380 57.7 4.1e-50 195.7
Cla08g00363 . 64 551 Trihelix Transcription Factor Family AT1G33240 50.5 2.7e-76 283.5
Cla11g00230 CCT 128 503 Trihelix Transcription Factor Family AT4G18670 80.4 6.3e-66 249.6
Cla06g01020 CCT 33 401 Trihelix Transcription Factor Family AT4G18670 81.6 3.4e-64 243.8
Cla06g00331 . 26 219 Trihelix Transcription Factor Family AT4G18670 58.5 1.1e-38 159.1
Cla05g00515 . 32 365 Trihelix Transcription Factor Family AT4G18670 64.5 1.0e-36 152.5
Cla06g00331 . 1 400 Trihelix Transcription Factor Family AT4G33970 63.2 1.9e-57 221.1
Cla06g01020 CCT 35 402 Trihelix Transcription Factor Family AT4G33970 67.5 2.5e-36 151.0
Cla08g00363 . 59 552 Trihelix Transcription Factor Family AT1G76880 57.3 4.3e-114 409.1
Cla08g00365 . 51 475 Trihelix Transcription Factor Family AT1G76880 55.6 1.2e-87 321.2
Cla10g01831 . 102 368 Trihelix Transcription Factor Family AT3G10000 53.5 1.6e-63 240.7
Cla06g00331 . 9 414 Trihelix Transcription Factor Family AT3G19020 62.0 7.1e-55 213.0
Cla06g01020 CCT 35 399 Trihelix Transcription Factor Family AT3G19020 73.6 1.5e-41 168.7
Cla11g00230 CCT 123 320 Trihelix Transcription Factor Family AT3G19020 69.5 1.1e-39 162.5
Cla05g01996 . 70 227 Trihelix Transcription Factor Family AT3G19020 74.1 3.3e-36 151.0
Cla06g00331 . 62 395 Trihelix Transcription Factor Family AT1G49490 66.1 2.3e-44 177.9
Cla06g01020 CCT 65 402 Trihelix Transcription Factor Family AT1G49490 74.0 1.2e-40 165.6
Cla11g00230 CCT 157 489 Trihelix Transcription Factor Family AT1G49490 73.3 1.5e-40 165.2
Cla05g02353 . 273 659 Trihelix Transcription Factor Family AT1G68690 61.9 5.1e-132 468.8
Cla11g00502 . 314 740 Trihelix Transcription Factor Family AT1G68690 55.8 2.2e-127 453.4
Cla05g02542 . 429 768 Trihelix Transcription Factor Family AT1G68690 65.3 1.5e-123 440.7
Cla06g00852 . 251 545 Trihelix Transcription Factor Family AT1G68690 64.4 4.5e-112 402.5
Cla11g00221 . 284 572 Trihelix Transcription Factor Family AT1G68690 64.4 5.8e-112 402.1
Cla07g00865 . 312 620 Trihelix Transcription Factor Family AT1G68690 57.1 7.9e-101 365.2
Cla07g01296 . 393 670 Trihelix Transcription Factor Family AT1G68690 55.3 3.6e-85 313.2
Cla07g00141 . 359 639 Trihelix Transcription Factor Family AT1G68690 57.0 6.1e-85 312.4
Cla10g01096 . 364 652 Trihelix Transcription Factor Family AT1G68690 55.5 2.3e-84 310.5
Cla03g01496 . 778 1059 Trihelix Transcription Factor Family AT1G68690 55.4 1.7e-82 304.3
Cla09g00062 . 491 772 Trihelix Transcription Factor Family AT1G68690 54.4 5.0e-79 292.7
Cla10g01964 . 79 386 Trihelix Transcription Factor Family AT1G68690 51.6 4.2e-78 289.7
Cla05g00626 . 74 358 Trihelix Transcription Factor Family AT1G68690 51.4 3.6e-77 286.6
Cla11g01825 CCT,ECH 113 394 Trihelix Transcription Factor Family AT1G68690 50.9 3.9e-76 283.1
Cla02g01354 . 85 376 Trihelix Transcription Factor Family AT1G68690 50.5 1.5e-75 281.2
Cla05g02353 . 273 605 Trihelix Transcription Factor Family AT1G26150 62.7 1.3e-111 401.0
Cla11g00502 . 279 660 Trihelix Transcription Factor Family AT1G26150 55.6 6.3e-111 398.7
Cla05g02542 . 472 714 Trihelix Transcription Factor Family AT1G26150 71.2 1.5e-99 360.9
Cla11g00221 . 284 518 Trihelix Transcription Factor Family AT1G26150 68.9 3.0e-97 353.2
Cla06g00852 . 248 491 Trihelix Transcription Factor Family AT1G26150 66.7 8.3e-95 345.1
Cla07g00865 . 312 566 Trihelix Transcription Factor Family AT1G26150 60.9 3.6e-90 329.7
Cla03g01496 . 771 1008 Trihelix Transcription Factor Family AT1G26150 60.1 5.4e-78 289.3
Cla10g01096 . 365 601 Trihelix Transcription Factor Family AT1G26150 60.1 1.6e-74 277.7
Cla10g01964 . 70 326 Trihelix Transcription Factor Family AT1G26150 54.9 1.6e-74 277.7
Cla07g01296 . 386 621 Trihelix Transcription Factor Family AT1G26150 55.5 2.1e-74 277.3
Cla02g00525 . 126 370 Trihelix Transcription Factor Family AT1G26150 53.2 4.4e-72 269.6
Cla09g00062 . 465 721 Trihelix Transcription Factor Family AT1G26150 53.3 1.7e-71 267.7
Cla08g01583 . 581 810 Trihelix Transcription Factor Family AT1G26150 53.5 6.4e-71 265.8
Cla11g00084 . 691 920 Trihelix Transcription Factor Family AT1G26150 54.3 3.2e-70 263.5
Cla02g01803 . 175 404 Trihelix Transcription Factor Family AT1G26150 55.6 9.2e-70 261.9
Cla05g00626 . 72 305 Trihelix Transcription Factor Family AT1G26150 55.6 7.8e-69 258.8
Cla06g01298 CCT 18 256 Trihelix Transcription Factor Family AT1G26150 51.0 7.8e-69 258.8
Cla02g01354 . 85 316 Trihelix Transcription Factor Family AT1G26150 56.0 1.0e-68 258.5
Cla11g01825 CCT,ECH 113 342 Trihelix Transcription Factor Family AT1G26150 55.2 2.3e-68 257.3
Cla09g02192 . 182 411 Trihelix Transcription Factor Family AT1G26150 54.7 2.3e-68 257.3
Cla01g01655 . 174 403 Trihelix Transcription Factor Family AT1G26150 50.9 3.9e-68 256.5
Cla09g02204 . 657 912 Trihelix Transcription Factor Family AT1G26150 51.6 5.1e-68 256.1
Cla07g00254 . 74 309 Trihelix Transcription Factor Family AT1G26150 52.5 1.1e-67 255.0
Cla08g00940 CCT,ECH 106 335 Trihelix Transcription Factor Family AT1G26150 56.6 1.9e-67 254.2
Cla06g00395 . 167 395 Trihelix Transcription Factor Family AT1G26150 54.3 4.3e-67 253.1
Cla07g01184 . 15 257 Trihelix Transcription Factor Family AT1G26150 50.6 4.3e-67 253.1
Cla09g00842 . 110 343 Trihelix Transcription Factor Family AT1G26150 52.6 2.1e-66 250.8
Cla06g01266 . 282 509 Trihelix Transcription Factor Family AT1G26150 50.4 1.5e-64 244.6
Cla05g00149 . 186 404 Trihelix Transcription Factor Family AT1G26150 50.9 3.4e-64 243.4
Cla04g00878 . 58 295 Trihelix Transcription Factor Family AT1G26150 51.3 7.6e-64 242.3
Cla11g00478 . 282 521 Trihelix Transcription Factor Family AT1G26150 50.2 9.9e-64 241.9
Cla10g01256 . 57 291 Trihelix Transcription Factor Family AT1G26150 50.6 1.3e-63 241.5
Cla05g02357 . 295 523 Trihelix Transcription Factor Family AT1G26150 50.2 1.3e-63 241.5
Cla05g00864 . 1018 1247 Trihelix Transcription Factor Family AT1G26150 50.9 3.8e-63 240.0
Cla08g00308 . 292 524 Trihelix Transcription Factor Family AT1G26150 50.6 1.9e-62 237.7
Cla09g01478 . 304 537 Trihelix Transcription Factor Family AT1G26150 50.9 3.2e-62 236.9
Cla03g00479 CCT 340 571 Trihelix Transcription Factor Family AT1G26150 51.3 5.4e-62 236.1
Cla05g02542 . 419 664 Trihelix Transcription Factor Family AT1G23540 68.0 5.1e-90 328.9
Cla06g00852 . 246 441 Trihelix Transcription Factor Family AT1G23540 69.4 3.9e-74 276.2
Cla11g00221 . 284 468 Trihelix Transcription Factor Family AT1G23540 69.2 3.3e-73 273.1
Cla07g00865 . 309 517 Trihelix Transcription Factor Family AT1G23540 64.6 3.7e-72 269.6
Cla05g02353 . 369 555 Trihelix Transcription Factor Family AT1G23540 67.9 1.2e-70 264.6
Cla11g00502 . 398 610 Trihelix Transcription Factor Family AT1G23540 61.0 2.9e-69 260.0
Cla09g02192 . 169 361 Trihelix Transcription Factor Family AT1G23540 52.6 6.5e-53 205.7
Cla02g01803 . 147 354 Trihelix Transcription Factor Family AT1G23540 50.7 1.9e-52 204.1
Cla02g00525 . 142 321 Trihelix Transcription Factor Family AT1G23540 53.9 9.4e-52 201.8
Cla01g01655 . 163 353 Trihelix Transcription Factor Family AT1G23540 51.6 2.1e-51 200.7
Cla08g01583 . 570 760 Trihelix Transcription Factor Family AT1G23540 50.5 2.7e-51 200.3
Cla02g01451 . 155 345 Trihelix Transcription Factor Family AT1G23540 51.6 3.6e-51 199.9
Cla03g01496 . 765 958 Trihelix Transcription Factor Family AT1G23540 51.8 3.6e-51 199.9
Cla11g00478 . 294 470 Trihelix Transcription Factor Family AT1G23540 57.5 7.9e-51 198.7
Cla10g02161 . 607 789 Trihelix Transcription Factor Family AT1G23540 52.5 1.4e-50 198.0
Cla10g01257 . 609 805 Trihelix Transcription Factor Family AT1G23540 50.3 2.3e-50 197.2
Cla06g01266 . 281 458 Trihelix Transcription Factor Family AT1G23540 55.0 6.7e-50 195.7
Cla07g00141 . 359 538 Trihelix Transcription Factor Family AT1G23540 53.9 1.1e-49 194.9
Cla05g02357 . 296 472 Trihelix Transcription Factor Family AT1G23540 54.7 1.5e-49 194.5
Cla07g01296 . 385 571 Trihelix Transcription Factor Family AT1G23540 50.8 1.5e-49 194.5
Cla11g00420 . 315 452 Trihelix Transcription Factor Family AT1G23540 65.9 2.0e-49 194.1
Cla06g00395 . 154 345 Trihelix Transcription Factor Family AT1G23540 51.0 2.0e-49 194.1
Cla11g01825 CCT,ECH 113 293 Trihelix Transcription Factor Family AT1G23540 53.0 5.7e-49 192.6
Cla03g01510 . 376 561 Trihelix Transcription Factor Family AT1G23540 50.5 5.7e-49 192.6
Cla01g00725 . 671 847 Trihelix Transcription Factor Family AT1G23540 53.1 7.4e-49 192.2
Cla09g00062 . 490 671 Trihelix Transcription Factor Family AT1G23540 52.2 1.3e-48 191.4
Cla09g02204 . 683 860 Trihelix Transcription Factor Family AT1G23540 51.7 6.3e-48 189.1
Cla08g00308 . 292 472 Trihelix Transcription Factor Family AT1G23540 53.6 1.8e-47 187.6
Cla01g02327 . 341 520 Trihelix Transcription Factor Family AT1G23540 50.6 2.4e-47 187.2
Cla05g00864 . 1018 1193 Trihelix Transcription Factor Family AT1G23540 51.7 5.3e-47 186.0
Cla06g01573 . 966 1144 Trihelix Transcription Factor Family AT1G23540 50.3 5.3e-47 186.0
Cla10g00875 . 278 458 Trihelix Transcription Factor Family AT1G23540 53.6 7.0e-47 185.7
Cla10g01096 . 364 551 Trihelix Transcription Factor Family AT1G23540 52.7 9.1e-47 185.3
Cla09g01478 . 304 484 Trihelix Transcription Factor Family AT1G23540 53.6 2.6e-46 183.7
Cla05g01002 . 772 947 Trihelix Transcription Factor Family AT1G23540 52.8 3.4e-46 183.3
Cla09g00322 . 800 975 Trihelix Transcription Factor Family AT1G23540 50.6 3.4e-46 183.3
Cla01g01557 . 876 1055 Trihelix Transcription Factor Family AT1G23540 51.7 5.9e-46 182.6
Cla07g00984 . 526 703 Trihelix Transcription Factor Family AT1G23540 51.1 3.8e-45 179.9
Cla08g01699 . 1 406 Trihelix Transcription Factor Family AT3G25990 62.6 5.4e-139 491.1
Cla11g00230 CCT 146 498 Trihelix Transcription Factor Family AT1G12040 65.1 2.6e-44 177.6
Cla05g00515 . 38 363 Trihelix Transcription Factor Family AT1G12040 58.8 7.4e-39 159.5
Cla06g01020 CCT 54 228 Trihelix Transcription Factor Family AT1G12040 63.4 6.9e-37 152.9
Cla10g02096 CCT 50 304 Trihelix Transcription Factor Family AT2G38250 65.1 1.3e-55 213.8
Cla11g00502 . 301 819 Trihelix Transcription Factor Family AT5G38560 60.0 4.4e-163 572.0
Cla05g02353 . 292 717 Trihelix Transcription Factor Family AT5G38560 60.1 7.3e-142 501.5
Cla05g02542 . 463 838 Trihelix Transcription Factor Family AT5G38560 63.5 9.2e-137 484.6
Cla11g00221 . 222 627 Trihelix Transcription Factor Family AT5G38560 55.4 3.7e-122 436.0
Cla06g00852 . 235 611 Trihelix Transcription Factor Family AT5G38560 58.0 6.0e-120 428.7
Cla07g00865 . 316 668 Trihelix Transcription Factor Family AT5G38560 58.7 3.5e-112 402.9
Cla10g01096 . 368 683 Trihelix Transcription Factor Family AT5G38560 52.2 2.8e-85 313.5
Cla07g01296 . 392 670 Trihelix Transcription Factor Family AT5G38560 53.7 4.5e-83 306.2
Cla03g01496 . 778 1063 Trihelix Transcription Factor Family AT5G38560 54.6 4.2e-81 299.7
Cla07g00141 . 359 653 Trihelix Transcription Factor Family AT5G38560 52.0 1.8e-79 294.3
Cla09g00062 . 491 787 Trihelix Transcription Factor Family AT5G38560 50.8 1.9e-78 290.8
Cla10g01964 . 95 384 Trihelix Transcription Factor Family AT5G38560 50.3 1.3e-74 278.1
Cla09g02192 . 181 466 Trihelix Transcription Factor Family AT5G38560 50.2 1.7e-74 277.7
Cla11g00221 . 291 652 Trihelix Transcription Factor Family AT4G32710 64.1 8.7e-125 444.9
Cla06g00852 . 239 623 Trihelix Transcription Factor Family AT4G32710 60.6 5.4e-119 425.6
Cla05g02542 . 436 840 Trihelix Transcription Factor Family AT4G32710 54.0 1.1e-108 391.3
Cla07g00865 . 319 653 Trihelix Transcription Factor Family AT4G32710 60.2 3.7e-107 386.3
Cla05g02353 . 375 664 Trihelix Transcription Factor Family AT4G32710 62.5 3.3e-100 363.2
Cla03g01496 . 778 1064 Trihelix Transcription Factor Family AT4G32710 51.0 4.7e-78 289.7
Cla11g01825 CCT,ECH 113 399 Trihelix Transcription Factor Family AT4G32710 50.3 5.5e-71 266.2
Cla05g02542 . 419 828 Trihelix Transcription Factor Family AT1G70460 70.3 6.8e-159 558.1
Cla11g00221 . 283 635 Trihelix Transcription Factor Family AT1G70460 64.6 9.6e-129 458.0
Cla11g00502 . 316 786 Trihelix Transcription Factor Family AT1G70460 52.5 1.4e-127 454.1
Cla05g02353 . 369 714 Trihelix Transcription Factor Family AT1G70460 64.0 7.6e-126 448.4
Cla06g00852 . 245 594 Trihelix Transcription Factor Family AT1G70460 64.6 1.3e-125 447.6
Cla07g00865 . 309 675 Trihelix Transcription Factor Family AT1G70460 61.2 4.8e-120 429.1
Cla07g01296 . 385 670 Trihelix Transcription Factor Family AT1G70460 51.4 1.2e-81 301.6
Cla03g01510 . 375 664 Trihelix Transcription Factor Family AT1G70460 50.3 4.4e-81 299.7
Cla03g01496 . 773 1063 Trihelix Transcription Factor Family AT1G70460 51.5 3.1e-79 293.5
Cla10g01096 . 364 656 Trihelix Transcription Factor Family AT1G70460 53.0 7.0e-79 292.4
Cla02g01803 . 164 461 Trihelix Transcription Factor Family AT1G70460 50.2 5.9e-78 289.3
Cla07g00141 . 359 643 Trihelix Transcription Factor Family AT1G70460 52.1 8.5e-77 285.4
Cla09g00062 . 490 776 Trihelix Transcription Factor Family AT1G70460 50.3 3.6e-75 280.0
Cla06g00395 . 156 432 Trihelix Transcription Factor Family AT1G70460 50.5 3.7e-72 270.0
Cla06g00331 . 25 395 Trihelix Transcription Factor Family AT2G15880 66.5 3.9e-61 233.4
Cla06g01020 CCT 35 406 Trihelix Transcription Factor Family AT2G15880 67.3 1.6e-41 168.3
Cla11g00230 CCT 128 489 Trihelix Transcription Factor Family AT2G15880 66.3 3.8e-40 163.7
Cla10g01831 . 102 368 Trihelix Transcription Factor Family AT5G03680 59.5 4.2e-77 286.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003757 1 6 0 3 0 1 2 1 1 1 1 1 2 1 0 2 1 0 2 1 1 1 1 0 0 1 1 0 0 1 33
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80701 PF07714 PK_Tyr_Ser-Thr 9.00E-40 CL0016 Cla PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla07g01296 Cla_Chr07 FPKM 0.413248 0.50634 18.631235 16.478956 16.38624 17.653921 15.931329 0.599659 0.794814 0.524062