Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01298 ATGGCAATGGAGGGAAAGCAGAAGTTCTTCCATGGAACGCTTGAAGTTACCATCTTCCATGCAACGGCTTACACCCCGCCATCACCTTTGGATTGCATATTTGCTGGAGGAAAGCGTAGCTATGTGACCATCAAGATAGACAACAAGGAGGTTGCCCAGACAAGCCATGAACATGACCGTGTTTGGAACCAGACATTCCGAGTTCTATGCGCACATCCATTGACTTCTACTGTCACCATTACAATGAAAACATCTCGTTCTGTCTTGGGTAAATTCTACATCCAAGCCCAACAGATTTTGAAAGAAGCAAGTTTTATCAATGGTTTCTTTCCACTTCTTATGGAAAATGGGAAGATGAGTCCGGAGCTCAAACTTCGATTCATGCTATGGTTTAAACCAGCAGTATATGAATTAAGCTGGAAAAAGATGCTGGGAAATGGAGAATACAAGGGGCTGAGAAATGCAACATTTCCTTTAAGGTCCAACTGTCATGTTACTCTGTATCAAGATGCTCACCACCTCCCTACTTTTCAACCTCCATTTCATGGTTCAAGTACACCAAAAAGGCTATGGGAAGATGTATACAAGGCCATAGATAATGCAAAGCATTTGGTTTACATTGCAGGCTGGTCCTTCAATCCAAAGATGGTGCTGGTAAGGGACTCTCAGACAGATATACCCTATGCTTTAGGAGTAACGCTTGGAGAGTTGTTGAAGCAGAAGGCAGAAGAAGGAGTAGCTGTGAGAATACTGATTTGGGATGATGAAACATCCCTTCCTATCATTAAGAATGCTGGGATAATGAACACACATGATGAAGATGCTCGCGCATATTTCTTGCACTCAAAAGTCATATGTAGATTGTGCCCCAAATTACATCCTATGTCTCCCCCAATTTTCTCTCATCATCAGAAAACCATAATCGTAGATGCTCAAACTCACATCAATGCACGAAACAGGGAGATTATGAGTTTCATTGGGGGTTTAGATCTTTGTGATGGTCGCTACGATACAGAACAACACTCACTGTTTCATACTTTGAACACAGAATCCCACTGTTGTGATTTCTATCAGACGAGTATATCAGGTGCCAAACTTCAAAAAGGAGGGCCAAGAGAGCCATGGCATGATGTTCACGCTTGTGTAACAGGTGAAGCTGCATGGGATATATTAACAAACTTTGAGCAACGATGGACTAAGCAATCAGATGCTTTGTTGTTAGTACCGACAAGCATCTTATCAAAATTGATGCCCCAGCTCGAATCGAACACAAGCCCACAAAAGGATTGGAATGTGCAAGTTTTTCGATCAATTGACTATTTGTCTGCTGGCCAAATGTTCAGAAACATGACCATTGAACGAACCATCCATGAAGCTTACGTTGAAGCTATCAGGCGAGCCGAGAGATTTATTTACATTGAAAACCAATATTTTATAGGAGGGTGTCACTTGTGGGACAAAGATCAACATTGTGGATGCACGAATTTGATACCGATTGAGATTGCGCTCAAGGTGGCTAATAAGATTAAGGCAAGGGAGAGGTTTGCAGTTTACATAGTGATTCCAATGTGGCCAGAAGGACCTCCAGAGAGTGAATCAGTTCAGGATATGCTACACTGGACAAGGCAGACAATGACAATGATGTATAGACTGATTGGAGAAGCAATCCAAGAAACTGGGGAAAAGGCCCATCCAAGAGATTACCTGAATTTCTTTTGCCTTGCAAACAGAGAGGAAGAGGGAAAGTGGGACTTTGTTCCCCCACACAGTCCCCAACATGCAACACAGTACTGGAATGCCCAACAACATAGGAGGTTCATGATCTATGTCCATTCCAAGGTCATGATAGTGGACGATTTGTACATTCTGATTGGATCCGCAAACGTAAACCAGAGATCCATGGACGGAGAGAGAGATACAGAGATAGCAATCGGATGCTACCAAATAGAAAATGATGGAAAAGAGTTACCAAATGGAAGAGACATTTCAACATTCCGATTGTCGCTTTGGTACGAACATACACGAAGATTCGAAGAACTGTTCTTAAACCCCGAAAGCTTGCAATGCGTTCAAAGGGTTTGTTCAATAGGAGATAAATCGTGGAAAATTTACAGTGGAGAAGAAGTTGAAGACATGAAAGGGGTTCATCTGGTAACGTACCCTGTGAAGGTGAAAGAGGATGGGTCGATGGAGGATTTGGAAGAAAATGGAGGCCATTTTCCTGATACCAAATGCCCCATTAAAGGAAGAAGATCAATGATGTTGCCGCCCATTTTCACAACCTAG 2286 42.52 MAMEGKQKFFHGTLEVTIFHATAYTPPSPLDCIFAGGKRSYVTIKIDNKEVAQTSHEHDRVWNQTFRVLCAHPLTSTVTITMKTSRSVLGKFYIQAQQILKEASFINGFFPLLMENGKMSPELKLRFMLWFKPAVYELSWKKMLGNGEYKGLRNATFPLRSNCHVTLYQDAHHLPTFQPPFHGSSTPKRLWEDVYKAIDNAKHLVYIAGWSFNPKMVLVRDSQTDIPYALGVTLGELLKQKAEEGVAVRILIWDDETSLPIIKNAGIMNTHDEDARAYFLHSKVICRLCPKLHPMSPPIFSHHQKTIIVDAQTHINARNREIMSFIGGLDLCDGRYDTEQHSLFHTLNTESHCCDFYQTSISGAKLQKGGPREPWHDVHACVTGEAAWDILTNFEQRWTKQSDALLLVPTSILSKLMPQLESNTSPQKDWNVQVFRSIDYLSAGQMFRNMTIERTIHEAYVEAIRRAERFIYIENQYFIGGCHLWDKDQHCGCTNLIPIEIALKVANKIKARERFAVYIVIPMWPEGPPESESVQDMLHWTRQTMTMMYRLIGEAIQETGEKAHPRDYLNFFCLANREEEGKWDFVPPHSPQHATQYWNAQQHRRFMIYVHSKVMIVDDLYILIGSANVNQRSMDGERDTEIAIGCYQIENDGKELPNGRDISTFRLSLWYEHTRRFEELFLNPESLQCVQRVCSIGDKSWKIYSGEEVEDMKGVHLVTYPVKVKEDGSMEDLEENGGHFPDTKCPIKGRRSMMLPPIFTT 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30122992 30125860 + ClCG07G013680.1 Cla07g01298 277286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01298 761 PANTHER PHOSPHOLIPASE D ALPHA 4 7 761 - -
Cla07g01298 761 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 9 124 IPR035892 -
Cla07g01298 761 SUPERFAMILY Phospholipase D/nuclease 144 408 - -
Cla07g01298 761 Pfam Phospholipase D C terminal 678 750 IPR024632 -
Cla07g01298 761 PANTHER PHOSPHOLIPASE D 7 761 IPR015679 -
Cla07g01298 761 SUPERFAMILY Phospholipase D/nuclease 423 690 - -
Cla07g01298 761 SMART pld_4 606 633 IPR001736 GO:0003824
Cla07g01298 761 SMART pld_4 300 335 IPR001736 GO:0003824
Cla07g01298 761 Pfam C2 domain 12 111 IPR000008 -
Cla07g01298 761 Gene3D Endonuclease Chain A 173 431 - -
Cla07g01298 761 PIRSF PLD_plant 2 761 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cla07g01298 761 Gene3D C2 domain 2 131 IPR035892 -
Cla07g01298 761 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 298 335 IPR001736 GO:0003824
Cla07g01298 761 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 606 633 IPR001736 GO:0003824
Cla07g01298 761 Pfam Phospholipase D Active site motif 300 335 IPR001736 GO:0003824
Cla07g01298 761 Pfam Phospholipase D Active site motif 607 633 IPR001736 GO:0003824
Cla07g01298 761 Gene3D Endonuclease Chain A 448 652 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01502 Cla-Chr2:29569741 Cla07g01298 Cla-Chr7:30122992 1.12E-15 dispersed
Cla06g00458 Cla-Chr6:5582149 Cla07g01298 Cla-Chr7:30122992 9.24E-12 dispersed
Cla07g01298 Cla-Chr7:30122992 Cla08g01332 Cla-Chr8:26184202 0 dispersed
Cla07g01298 Cla-Chr7:30122992 Cla09g00253 Cla-Chr9:2509973 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01298 K01115 - csv:101206396 1514.98