Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01299 ATGGATTGTTTGTGGATATTTGTGCAGCTCATCACAGCTGCAGCTTTCATATCTTCCACAATCATAATCCTGAAAAGCTTCATCAACCCCACCACAGCACCACCATCATCATCTTCAAACTCCCCCTCCTCCAACAATAACCCTTCACTTCCTTCTGGTTCCCTCGGTCTCCCCTTGGTCGGTGAAACCCTCCACTTCGTCTCTTCCGCTTACTCTCACCGCCCCGACACCTTCATGGACACACGTCGCCAACGGTATGGAAAGGTTTTCAAATCACATATATTTGGAAGTCCAACAATAGTTTCAACTGATGCTGAAGTCAATAGGTTTATTCTACAAAGTGATGCAAAGGTTTTTGTACCATCTTATCCAAAATCTGTGACAGAGTTGATGGGAAAATCTTCTATATTGCTCATTAATGGCAGTTTGCATAGAAGAATTCATGGCCTTATTGGAGCATTTTTCAAGTCATCTCATCTCAAAGCTCAAGTAACCATAGACATGCAGAAATATCTTCAAAAATCCATCTCTACTTGGACTAATACTTGTCAACACAATCCTGTCCACATACAAGATGAAGCCAAAAATATTGCCTTTGAAATACTAGTAAAGACACTGATCAGTTTGGAAGCTGGTGAAGAAATGGAATTTCTCAAGAAACAGTTTAATGAATTCATTGCTGGGATTATGGCTTTCCCAATAAACATCCCAGGAAGCAGACTTTACCGATCATTACAGGCGAAAAGGAAAATGGTTAAGTTAGTGAAAGAAATAATAGAAGGAAGAAGAAAGAAGATGGGTGAGAAATTGAATAAGGCAGTCCCATTGAATGATGTTGTGGATGTTTTGGTGAATGATGGAAGCCAACAAGTTACAAATGAACTAATAGCAGATAATATGATTGATATGATGATTCCAGGCCAAGATTCTGTCCCAATTCTTATCACTTTGGCTATTAAATACCTTTCAGATTCCCCATCTGCCCTTCAACGATTAGTGGAAGAAAACATGGAATTGAAAAGATTGAAAACTCAGGTTGGAGAGGCATTGAAGTGGAGTGATTACTTGTCTTTACCATTTACACAAAATGTCATAACAGAGACGTTAAGGATAGGAAACATAATAACAGGAGTGATGAGAAAGGCGATGAAAGACATTGAGATAAAAGGGTATTTAATACCTAAAGGATGGTGTGTCCTTGCATATATTAGGTCAGTTCATGTTGATGAAAACCACTTCCAAACCCCTTACCATTTCAATCCATGGAGATGGCAGGATAAAGACTCAAACAACTCCAATTTTACTCCTTTTGGAGGAGGACAAAGGTTGTGCCCTGGACTTGAATTAGCTCGACTAGAAGCTTCAATTTTCTTACATCACTTCGTTACTGAATTCAGGTGGGTGGCTGAGGAAGACAATATTATCAACTTCCCAACAGTAAGGATGAAGAACAAAATGACAATTTGGGTCAAGAAGAGAGAGCATTAA 1488 39.18 MDCLWIFVQLITAAAFISSTIIILKSFINPTTAPPSSSSNSPSSNNNPSLPSGSLGLPLVGETLHFVSSAYSHRPDTFMDTRRQRYGKVFKSHIFGSPTIVSTDAEVNRFILQSDAKVFVPSYPKSVTELMGKSSILLINGSLHRRIHGLIGAFFKSSHLKAQVTIDMQKYLQKSISTWTNTCQHNPVHIQDEAKNIAFEILVKTLISLEAGEEMEFLKKQFNEFIAGIMAFPINIPGSRLYRSLQAKRKMVKLVKEIIEGRRKKMGEKLNKAVPLNDVVDVLVNDGSQQVTNELIADNMIDMMIPGQDSVPILITLAIKYLSDSPSALQRLVEENMELKRLKTQVGEALKWSDYLSLPFTQNVITETLRIGNIITGVMRKAMKDIEIKGYLIPKGWCVLAYIRSVHVDENHFQTPYHFNPWRWQDKDSNNSNFTPFGGGQRLCPGLELARLEASIFLHHFVTEFRWVAEEDNIINFPTVRMKNKMTIWVKKREH 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30128051 30134543 - ClCG07G013690.2 Cla07g01299 277287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01299 495 SUPERFAMILY Cytochrome P450 48 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01299 495 PANTHER CYTOCHROME P450 26 19 487 - -
Cla07g01299 495 Gene3D Cytochrome P450 39 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01299 495 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01299 495 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01299 495 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01299 495 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01299 495 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01299 495 Pfam Cytochrome P450 51 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla07g01299 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Cla07g01299 495 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 19 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01946 Cla-Chr1:34126032 Cla07g01299 Cla-Chr7:30128051 4.37E-178 dispersed
Cla07g00388 Cla-Chr7:4774307 Cla07g01299 Cla-Chr7:30128051 9.92E-130 dispersed
Cla07g00867 Cla-Chr7:24087472 Cla07g01299 Cla-Chr7:30128051 5.11E-104 dispersed
Cla07g01299 Cla-Chr7:30128051 Cla11g00461 Cla-Chr11:5269868 4.05E-97 dispersed
Cla07g01299 Cla-Chr7:30128051 Cla09g00055 Cla-Chr9:546635 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01299 K12638 - csv:101212581 832.787