Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01318 ATGATGGAAGAGATGTCTCCTGCTGTTTCTTTGACCCTTAGTTTGGGTAATCCAAAGTCTGATAGCTCAGTAAATCCTGGTCATGTCGAATTCACACGGCTAAAGTTAGTGACGGACACAGTAAATTTATTCTCTGCATCGTCCCCTGAGTCAGGTTCTATTGGTAATGGTAGTTGCCATGATTTTAATGGTATAGTTGACAGCATAACTGTGTCACAACCGACTGATAATGGTCAAGGTATCGACAGTTTTTGGGGGTTGTTACCAAAGAATGGCACGAATTTGACCGTAGATAAGGAAGGTGCATCCTTAGCTACTCTGGATGACCCTGATGAAATGATAGACGATGGGTTGTTTGCTATTGATGGCGGTTCAAGTATTAATGTGCAAGAAGTTGTCAAAATTGGAGATGTTGCTAATGGTCATATTGTTGCAAAGGCTATCATCTTGGTGGAATCAGGGAAGATGCCTACTAGTGAACTTATTGTGGCGACAGTAAGCCCAGATTTAGAAGTATCTGCATCGTCAGAGCTAAACGTCCCTGCAGTAGTTTTCCAATCGAAAGGGGGGGATAGTGTTCATAAAGGCATTCGTAGTGTCTTTGAACGCGATTGTATCCCCCTTTGGGGGTCCGTATCAATTTGTGGTAGAAGACCAGAAATGGAAGATGCAATTGCTGCCGTTCCTTGTTTTGCAAAGATTCCTATCAAAATGCTTGTAGGAAATGGTATGCTGAATGGAATGGGTCAAAGTTTAACACATCTCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGGGGCCCTCAGGTTGCTGATTATTGTCGAGAGCGTATACACTTGGCACTAGCTGAAGAGATAAGCGGATTCAAACAAAATCAAAATAATGGAAGCAATGGAGAAAACTGGCAGCAGGATTGGGAGAGAACCTTTTACAATTGTTTTCTTAGGGTTGATGATGAAATAGAAGGAAAAGTTGGTAGAACAGTCCGTGGGAGTGGTGGAGATGTTTCCGATACAAGCTTCGAGCCTGTTGCCCCGGAAACTGTTGGCTCTACGGCTGTTGTTGCATTGGTATGTTCATCACACATCATAGTTGCAAACTGTGGTGATTCAAGAGCAGTCCTATGCCGTGGTAAAGAACCCATGGCTCTATCGGTCGATCACAAACCAAATCGCGAAGATGAATTCACTAGGATTGAATCATCTGGAGGCAAGGTCATCCAGTGGAATGGACATCGCGTGTTTGGAGTTCTTGCAATGTCAAGATCCATTGGTGATAGATATTTGAAACCATGGATTATTCCTGATCCAGAAGTCATGTTCGTTCCTCGTGCGAAAGAAGACGAATGTCTTATTTTAGCCAGTGATGGACTGTGGGATGTGATGACAAATGAGGAAGTCTGTGAAATAGCTCGAAGGCGGATTCTGCTTTGGCACAAGAAACACGGGGCTTCGTCTCTTGCCGATCGGGGCACAGGAGTTGACCCAGCTGCTCAAGCTGCAGCAGATTACCTCTCAATGCTTGCTCTCCAAAAGGGAAGCAAGGACAACATCTCTGTCATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCTTGA 1611 43.89 MMEEMSPAVSLTLSLGNPKSDSSVNPGHVEFTRLKLVTDTVNLFSASSPESGSIGNGSCHDFNGIVDSITVSQPTDNGQGIDSFWGLLPKNGTNLTVDKEGASLATLDDPDEMIDDGLFAIDGGSSINVQEVVKIGDVANGHIVAKAIILVESGKMPTSELIVATVSPDLEVSASSELNVPAVVFQSKGGDSVHKGIRSVFERDCIPLWGSVSICGRRPEMEDAIAAVPCFAKIPIKMLVGNGMLNGMGQSLTHLNSHFFGVYDGHGGPQVADYCRERIHLALAEEISGFKQNQNNGSNGENWQQDWERTFYNCFLRVDDEIEGKVGRTVRGSGGDVSDTSFEPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEFTRIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRAKEDECLILASDGLWDVMTNEEVCEIARRRILLWHKKHGASSLADRGTGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30357883 30361519 - ClCG07G013870.1 Cla07g01318 277306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01318 536 MobiDBLite consensus disorder prediction 1 24 - -
Cla07g01318 536 SMART PP2C_4 198 524 IPR001932 -
Cla07g01318 536 ProSiteProfiles PPM-type phosphatase domain profile. 208 526 IPR001932 -
Cla07g01318 536 Gene3D - 195 536 IPR036457 -
Cla07g01318 536 ProSitePatterns PPM-type phosphatase domain signature. 259 267 IPR000222 GO:0043169
Cla07g01318 536 CDD PP2Cc 210 526 IPR001932 -
Cla07g01318 536 Pfam Protein phosphatase 2C 236 519 IPR001932 -
Cla07g01318 536 PANTHER PROTEIN PHOSPHATASE 2C 16 112 536 - -
Cla07g01318 536 SUPERFAMILY PP2C-like 200 527 IPR036457 -
Cla07g01318 536 MobiDBLite consensus disorder prediction 10 24 - -
Cla07g01318 536 PANTHER ALPHABET, ISOFORM E-RELATED 112 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01554 Cla-Chr3:31192193 Cla07g01318 Cla-Chr7:30357883 1.42E-93 dispersed
Cla05g00826 Cla-Chr5:8086349 Cla07g01318 Cla-Chr7:30357883 1.20E-70 dispersed
Cla07g01318 Cla-Chr7:30357883 Cla08g01003 Cla-Chr8:22775029 1.73E-174 dispersed
Cla07g01318 Cla-Chr7:30357883 Cla03g00118 Cla-Chr3:1202141 2.53E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01318 K14497 - csv:101203499 1011.52