Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01350 | ATGAGACCGCTCCAGCCGCCTCAGGGTGCGAATCCTCCCACCGATCGTACTCGTCGTCGACCGCAGCTAAATAATCTTCAGCTTCCGCAGAGGGACAATACGTCTTTGGCTGTTCCTCTCCCTTTGCCTCCCACCTCCTCCAACTCTGCGCATCCTCCTTCCACCAGTCAACTCCACAACGCCAACCGCCCGCCGGACCCTCATCCTCAGAAGCGTCAGGCTTTTAGCCTTTCGGATTTTGAGCGAGTGAGCCGAATCGGAAGTGGATGCGGAGGCACCGTCTATAAAGTGGTTCACCGTCCCACCGGCGGTGTTTATGCTCTCAAGGTCATTTACGGCAACCATGAGGATGCGGTTAGGCTCCAGATGTGCCGGGAGGTCGAGATCCTTCGTGACGTTGACAATCCCTATGTGGTCAAGTGCCACGATATGTTCGATCATAACGGCGAAATCCAGGTTCTTCTTGAGTACATGGATCGGGGTTCTTTAGAAGGAACGCACATCCCTCAAGAACACCATCTCTCTGATTTGGCTCGCCAGATTCTTAGCGGCCTCGCTTATCTCCATAGCCGCCGTATCGTCCATCGCGACATCAAACCCTCGAATCTCCTCATCAATTCCAGAAGACAGGTTAAGATCGCTGATTTCGGCGTCGGTCGAATCTTGGAACAGACTATGGACCCTTGCAATTCCTCGGTTGGGACTATTGCGTACATGAGCCCTGAGAGAATCAATTCCGATCTAAATCAGGGTCAGTACAATGGGTATGCTGGTGATATTTGGAGCTTTGGGGTTAGCATATTGGAATTCTATCTCGGTCGGTTTCCTCTTGCTGTCGAGAGACCTGGGGATTGGGCGAGCTTGATGTGCGCTATTTGTATGGCTCAGCCACCAGAGGCCCCGCCCACTGCTTCCCCGGAGTTTCGCCACTTTATTGCCTGTTGTTTGCAAAGAGAGGCTCGGAAGAGATGGACTGCAGCTGCATTACTGGAACATGCATTCATAACCAGGAAAAATGGAGCAACTCAGTACCAGAATCAGCAAGCTCATCATCAGAATCTTCGTCAACTATTACCTCCTCCACCCCTTCATCCTTCCAGCCTTTCCTGA | 1110 | 52.16 | MRPLQPPQGANPPTDRTRRRPQLNNLQLPQRDNTSLAVPLPLPPTSSNSAHPPSTSQLHNANRPPDPHPQKRQAFSLSDFERVSRIGSGCGGTVYKVVHRPTGGVYALKVIYGNHEDAVRLQMCREVEILRDVDNPYVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEHHLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPPTASPEFRHFIACCLQREARKRWTAAALLEHAFITRKNGATQYQNQQAHHQNLRQLLPPPPLHPSSLS | 369 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 30670398 | 30671507 | + | ClCG07G014190.1 | Cla07g01350 | 277338 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01350 | 369 | MobiDBLite | consensus disorder prediction | 1 | 72 | - | - | |
Cla07g01350 | 369 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 15 | 356 | - | - | |
Cla07g01350 | 369 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 | 15 | 356 | - | - | |
Cla07g01350 | 369 | SUPERFAMILY | Protein kinase-like (PK-like) | 59 | 355 | IPR011009 | - | |
Cla07g01350 | 369 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672|GO:0006468 | |
Cla07g01350 | 369 | ProSitePatterns | Protein kinases ATP-binding region signature. | 86 | 109 | IPR017441 | GO:0005524 | |
Cla07g01350 | 369 | Pfam | Protein kinase domain | 80 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g01350 | 369 | SMART | serkin_6 | 80 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g01350 | 369 | CDD | PKc_MAPKK_plant_like | 78 | 336 | - | - | |
Cla07g01350 | 369 | MobiDBLite | consensus disorder prediction | 11 | 63 | - | - | |
Cla07g01350 | 369 | Gene3D | Phosphorylase Kinase; domain 1 | 55 | 159 | - | - | |
Cla07g01350 | 369 | ProSiteProfiles | Protein kinase domain profile. | 80 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla07g01350 | 369 | MobiDBLite | consensus disorder prediction | 345 | 369 | - | - | |
Cla07g01350 | 369 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 358 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00888 | Cla-Chr3:12468569 | Cla07g01350 | Cla-Chr7:30670398 | 5.80E-21 | dispersed | |
Cla04g01028 | Cla-Chr4:25428858 | Cla07g01350 | Cla-Chr7:30670398 | 1.63E-87 | dispersed | |
Cla07g01350 | Cla-Chr7:30670398 | Cla11g00151 | Cla-Chr11:1802433 | 3.63E-56 | dispersed | |
Cla07g01350 | Cla-Chr7:30670398 | Cla03g01476 | Cla-Chr3:30269699 | 8.04E-60 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80704 | PF00069 | Pkinase | 7.10E-60 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01350 | K13413 | - | csv:101219669 | 688.723 |