Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01353 ATGGAGTTGGGGAGAGCCGTTGCTGCTAGTCAGTATCTGCATTTTGGGATGGAGGTTCTCCTTCCATTCGAAGTTCCTTCTCTTACATTAGCTTTCAGGCACTTCTTTTCTTCTTCGTCTGTTCTCAGTTCTTCAATGTCTGCTCTGTATAGTGGAAAGCAACTTGGGATCTCATCATATGAAGAACTTTCTTCCTCCGGTGCTATGAGCTTCTTTAAGAACGTCGTCTCGGCTCTAAATGCCATGTATAATAGTTTAAACTCGCCTCCAATTCTAACACAATGGAGTTCAAGTGGTGGAGATCCATGTGGACAAATTTGGAAAGGCGTTACTTGCTTAAGCTCACGGGTCACAGAAATTTCATTGTCTGGTTTAGGACTTTCTGGATCACTGGGATACCAGCTCTCAAGTTTGACATCTCTAACTAATCTAGATGTGAGTAACAACAATCTTGGACCTGACATACCTTATCAACTCCCTCAAAACTTGCAAAAACTGAACATGAGCCACAACCAGCTTCAGAATCAAGTGAATGATATGTTCTGGAAGCTTTCTTCCCTGTCCATGTTGGATGTCTCTTTCAATTTTCTGTCAGGTGCCCTCCCCCAGAGTTTTAGCAACCTTACCAGTCTGAACACAATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCGCTACAAAATTTGAATGTCGAGAACAACCATTTTACTGGGTGGGTTCCTGAAAGATTGAAGAACATTAATATTCAGGAGGGTGGCAATTCTTGGAGTTTTGGGCTTGCACCCCCACCTCCACCTGGGACACCTCCAGCCAACCAAAATTACAGATATCACAAGGCTGGGAACAATTACAGCCCACTGAGTAGTGCTGGTGGTGGTGGCGGTAGCAATAGATCAGGAATCAGTGGTGGTGCCATTGCTGGAATTCTTATATCTGTGCTAGTGGTAGGAGCAGTACTAGCATATCTCCTTGTAAAGAGAAGACCCAAGAGGTCATCCACAGACATAGAAAAGCAAAAGCATGGGAACTTGCCTAGCGTATCTCCTGCTTCAAATGAAGTGCAAGTTTTTCCAAAGCTTTCGAGTATTTTTCCCCTGAACATCCTCAAATACGAGGCCACATCTTTCCACACCTTTATGCTCTTTCTTCTGAATTCTGATGCCCACAAGCCCAGACCTCAATTATGGATGAAAGAGCTCTCAACCTGGAACCTCAGCTTTAAAGGAACGTCAAGAAAGAGGAATATATGGATTGGCTCTCCCTCATGGGTCAGATTGAAGCATGTTCCCCAACCAATTGCCTGTTTTCATGGACATGGCCTATGGACCCTTCCGGCTCTTTCACTTGATACATTGGCAGAGATGAAACTTGTTCATACTTCATCCTCATTTGATGCAAAAGAATTGGATTCTCCTGCTTCAATCAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTCGATGACAATGATACATCAAAGGTACCTGTGGTGAAGAAGACCAATGTCACTCCTCCGATAAGTGTGAAATCATATTCAATAGCAGATCTGCAAATGGCTACAGGTAGTTTCAATGTAGAAAACCTTCTCGGTGAGGGATCACTTGGTCGTGTTTATCGGGCTCAGTTCAACGATGGGAAGGTTCTTGCCGTGAAGAAAATAGATTCAGCTGCCTTCCCTAAAGAATTGTTGGAATATTTCACGGAGATAGTTGCTAATGTATCTCAGTTGCATCATCCTAATGTAACCGAGCTAATGGGTTATTGCTCGGAGCATGGCCTGCATTTGCTACTATATGAGTTCCATAAGAATGGCTCACTACATGACTTCTTGCACATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATTGCTTTGGGGACGGCCCGTGCTTTGGAAAATATTAAGTCATCCAATATCTTACTAGATGCTGAAATGAATCCTCATCTCTCCGATTGTGGCCTGGCTAGTTTTATAACCAATCTAGATCAGGTATTAGATCAGCAGCCAGGATCTGGGTACAGTGCTCCTGAGGTTACAATGTCTGGCCAATATACATTAAAAAGCGACGTATATAGCTTTGGAGTAGTGATGTTGGAACTTCTAAGCGGACGGAAGCCATTTGATAGTTCAAGGCCAAGAGCTGAGCAATCCTTGGTTCGATGGGCTACACCTCAGCTCCATGATATTGATGCCTTGACGAAAATGGTTGATCCTGCACTTAAAGGCCTCTACCCAGTCAAGTCTCTTTCAAGATTCGCAGACGTTGTAGCTCTCTGTGTCCAGCCTGAGCCTGAATTCAGACCACCCATGTCAGAGGTGGTGGAAGCGTTGGTTCGGCTTGTGCAGAGATCCAACATGAGCAGAAGAACATTTGGAAGTGATCATGGGTCATCTTTTAGAACTGATGATCCTGATACACGCGAGACATCTTAA 2475 43.72 MELGRAVAASQYLHFGMEVLLPFEVPSLTLAFRHFFSSSSVLSSSMSALYSGKQLGISSYEELSSSGAMSFFKNVVSALNAMYNSLNSPPILTQWSSSGGDPCGQIWKGVTCLSSRVTEISLSGLGLSGSLGYQLSSLTSLTNLDVSNNNLGPDIPYQLPQNLQKLNMSHNQLQNQVNDMFWKLSSLSMLDVSFNFLSGALPQSFSNLTSLNTMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPPANQNYRYHKAGNNYSPLSSAGGGGGSNRSGISGGAIAGILISVLVVGAVLAYLLVKRRPKRSSTDIEKQKHGNLPSVSPASNEVQVFPKLSSIFPLNILKYEATSFHTFMLFLLNSDAHKPRPQLWMKELSTWNLSFKGTSRKRNIWIGSPSWVRLKHVPQPIACFHGHGLWTLPALSLDTLAEMKLVHTSSSFDAKELDSPASINLKPPPIDRHKSFDDNDTSKVPVVKKTNVTPPISVKSYSIADLQMATGSFNVENLLGEGSLGRVYRAQFNDGKVLAVKKIDSAAFPKELLEYFTEIVANVSQLHHPNVTELMGYCSEHGLHLLLYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALENIKSSNILLDAEMNPHLSDCGLASFITNLDQVLDQQPGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDDPDTRETS 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30688980 30695746 + ClCG07G014220.2 Cla07g01353 277341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01353 824 SUPERFAMILY Protein kinase-like (PK-like) 516 790 IPR011009 -
Cla07g01353 824 MobiDBLite consensus disorder prediction 802 824 - -
Cla07g01353 824 MobiDBLite consensus disorder prediction 809 824 - -
Cla07g01353 824 Pfam Protein tyrosine and serine/threonine kinase 534 791 IPR001245 GO:0004672|GO:0006468
Cla07g01353 824 MobiDBLite consensus disorder prediction 266 286 - -
Cla07g01353 824 Gene3D Transferase(Phosphotransferase) domain 1 611 814 - -
Cla07g01353 824 SUPERFAMILY L domain-like 76 252 - -
Cla07g01353 824 Gene3D Phosphorylase Kinase; domain 1 493 609 - -
Cla07g01353 824 ProSiteProfiles Protein kinase domain profile. 532 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01353 824 PANTHER OS01G0253100 PROTEIN 178 820 IPR045271 GO:0004714|GO:0006468
Cla07g01353 824 Gene3D Ribonuclease Inhibitor 73 265 IPR032675 -
Cla07g01353 824 PANTHER OS01G0253100 PROTEIN 66 177 IPR045271 GO:0004714|GO:0006468
Cla07g01353 824 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 66 177 - -
Cla07g01353 824 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 178 820 - -
Cla07g01353 824 Pfam Leucine rich repeat N-terminal domain 77 112 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01353 Cla-Chr7:30688980 Cla08g00508 Cla-Chr8:15265579 8.60E-68 dispersed
Cla07g01353 Cla-Chr7:30688980 Cla09g00135 Cla-Chr9:1379013 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80705 PF07714 PK_Tyr_Ser-Thr 1.60E-31 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01353 - - csv:101208239 679.863