Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01358 | ATGGCACAAACCGACGACTGCGCCGTCACCGGATTTTTGTTCTCCGGCAGCCCCATTTCCATTTCCAACATAAAAATCAAGCTGTTGGTGTTAGCCGTGTGGGCTGCGCTTGTCCTGACGGGCGTCTCCTCCGACGAGCACGTGAGAAGCACGTGCGCCATGACGCTTTACCCGGAGCTTTGCGAGACGACGATATCGAGCGGAGTGGGAAGTAAGAGTTCAAAAGAGGCAATCGAATCGTCGGTGAATATTACGATTGGCGCAGTGAAGGATAACTATAAAAGGATCAAGAAATTGGTTAAGACAGGAAAGAATCTGAGAAAGCGAGAGAAGATTGCTCTCAATGACTGTCTAGAAACAGGGGAGGAGACGCTGAGAGAGCTGTATGAGGTTGTTGATGATCTCCATGAATATCCTAATAAGAAATCTCTCTCACAATACGCCGATGACCTCAAAACCTTCCTCAGTTCCGCCATTACGAATCAGGAGACATGCGTGGACGGATTCTCGCACGACAAAGCCGACAAGAAGGTACGAGAGTCATTAGAAGCAGGCCTAATTCACGTCGAAAAGCTTTGTAGCGTTGCTTTAGCCTTGATTAAGAATCTAACCGACACCGACATTGCCAATCACAACGACAACCTCATCAATAGAAACCAGCTCACGGAGATCAACAATGGACGCGACCACGACGGAATTAACTGGCCCCATTGGATGTCGCCTGGCGACCGAAGGCTTTTGCAGGCGTCGTCCACCGCCACTCCCGATGTGGTAGTGGCAGCCGATGGAAGTGGCAATTTCCGAACGGTGTCGGAGGCGGTTGCGGCGGCGCCGAATAGAAGTAGCCGGAGGTATATAATAAGAATAAAGGCAGGGGTTTATAGAGAAAATGTGAATGTGCCGAGTAGTAAGACGAATATAATGTTTTGGGGAGATGGAAGAACCACCACTATAATCACCGGGAACAGAAATGTCGTCGATGGCACGGCAGTGGGAGAAAGGTTCTTGGCGAGAGACATTACGTTTCAGAACACCGCCGGTCCATCGAAGCACCAAGCGAGGAACATGGTGACTGCACAAGGAAGAACAGACCCAAATCAAAACACTGGGATTGTCATCCAGAAATGTCGAATCGGAACCACCTCCGATTTGCAGCCGGTGATCAGTAATTTCCCAACGTTTCTGGGGCGGCCGTGGCAGAGATACTCGAGAACGGTGGTTATGCAGACGAGCATTAGCAATGTGATCGATCCGGCAGGGTGGCATGTTTGGGATGGGAATTTTGCGCTTGATACTCTGTTTTACGCCGAGTATCAGAATAGCGGGCCCGGTGCTGATACGTCAAGGAGAGTAACGTGGAAGGGGTATAGGGTTCTTACAAGTGCGGCGGAAGCTGCGGCCTTCACGGCAGGGAATTTCATCGGCGGCGGCACCTGGCTGAGATCCACTGGATTCCCATTTTCACTTGGGCTGCAATTCCCTTCCCTGAGGAGAACAACCTCCATTTCTCGATCGCCACGCATTTCCTTTTCAAACGGAACCCCAACTCTGAAATCCATGGATACCGTCAAGTCCTTCAAGGGCTACGGCAAGGTCGACGAGCTCGAACAGCAAGCTTTCCGCCAAAAGACTCGTCGCCGGCTAATCATACTCCTTCTTTCCATTCTTCTTCTAATTGCTCTCGTCATCGGCGCCGTCGTCGGAATTGTCATTCATAAACGAAACTCTTCTTCTTCATCGCCCACCAGCTCAGCTCCTCCCACCGAGCTCACTCCCGCTGCCTCACTCAAAACTCTCTGTAGTGTTACTCAGTATCCCAGTTCCTGTCAGTCCTCTCTCCAAAACTCCAACACTACCGATCCGGTATTTCTCTTCAAGCTTTCTCTCCGAGTTGCCACCGATTCCCTCTCGAAACTTTCCGATTATACCTCTACTCTCAATTCCAATACTGGAGATCCGAAGGTTAAAGCCGCCATTGAAATCTGCCGGAGTGTTTTTGAAGATGCCATTGACACGCTAAACGACACCGTTTCATCCATGGAAGTGGATCACCATAGTGAGAAGTTCTTGTCGCCGTCTAGGATTGAAGATCTGAAAACCTGGCTGAGCACTACAATCACAGATCAAGAAACCTGCCTCGACGCAGTTCGAGATCTAAACCAGACGACGCTTCTCCAAAACTTGCAAACGGCAATGGCGAACTCTACTGAGTTTACTAGCAATAGTTTAGCGATTGTAACGAAAATCCTTGGACTGTTGGCTGATTTCAACATCCCTATCCACCGGAAGCTGATGGGACTCCCGGAGTGGTTAAGCTCCGGCGATCGAAGGCTTCTGCAGGAGAACAATGTGACGGCGCATATGACGGTGTCGAAGGATGGGAAAGGGCACTACACAACGATCAAAGATGCCGTAGCGGCGGTGCCAAAGAAGAGCAAAGAAAGATTCATCATACATGTAAAAGAAGGAATATACGAAGAGAATGTGATTCTGGACAAGAACAAGTGGAACGTTATGATGTATGGAGATGGCAGAACCAAAACCATTGTTTCGGGCCACCTGAACTTCATCGACGGCACTCCCACCTTCTCCACCGCCACTTTTGCTGTTGCTGGCAAAGGGTTCATTGGGAAGGACATGGGGTTCATCAACACGGCCGCCCAAGGCAAAAAGGACATCAACCAAAACTCCGGCATTTCCATTCAGAAATGCACTTTTTCGGCCTACAACGACAGTCTAACCGCCCCCACTTACCTGGGTCGGCCATGGAAGGAGTTTTCCACCACGGTGATTATGCAGTCGGACATCGGAGCATTCCTGCAGCCCGTGGGGTGGAAGGAATGGGTCAGCGGGCAGGACCCACCCAGCAGCATATTTTATGGGGAGTATCAGAATACTGGGCCTGGATCCAGCGTGGACAAGAGGGTTAGATGGGCCGGTTACAGGCCCAGTCTTACGGACGCCGAGGCCGGAAAGTTCACTGTCAGGACCTTCCTCAACGGCGAGGATTGGTTGCCGGCCACCAGTGTAAAGTTTGATACATCCTTGTGA | 3051 | 50.54 | MAQTDDCAVTGFLFSGSPISISNIKIKLLVLAVWAALVLTGVSSDEHVRSTCAMTLYPELCETTISSGVGSKSSKEAIESSVNITIGAVKDNYKRIKKLVKTGKNLRKREKIALNDCLETGEETLRELYEVVDDLHEYPNKKSLSQYADDLKTFLSSAITNQETCVDGFSHDKADKKVRESLEAGLIHVEKLCSVALALIKNLTDTDIANHNDNLINRNQLTEINNGRDHDGINWPHWMSPGDRRLLQASSTATPDVVVAADGSGNFRTVSEAVAAAPNRSSRRYIIRIKAGVYRENVNVPSSKTNIMFWGDGRTTTIITGNRNVVDGTAVGERFLARDITFQNTAGPSKHQARNMVTAQGRTDPNQNTGIVIQKCRIGTTSDLQPVISNFPTFLGRPWQRYSRTVVMQTSISNVIDPAGWHVWDGNFALDTLFYAEYQNSGPGADTSRRVTWKGYRVLTSAAEAAAFTAGNFIGGGTWLRSTGFPFSLGLQFPSLRRTTSISRSPRISFSNGTPTLKSMDTVKSFKGYGKVDELEQQAFRQKTRRRLIILLLSILLLIALVIGAVVGIVIHKRNSSSSSPTSSAPPTELTPAASLKTLCSVTQYPSSCQSSLQNSNTTDPVFLFKLSLRVATDSLSKLSDYTSTLNSNTGDPKVKAAIEICRSVFEDAIDTLNDTVSSMEVDHHSEKFLSPSRIEDLKTWLSTTITDQETCLDAVRDLNQTTLLQNLQTAMANSTEFTSNSLAIVTKILGLLADFNIPIHRKLMGLPEWLSSGDRRLLQENNVTAHMTVSKDGKGHYTTIKDAVAAVPKKSKERFIIHVKEGIYEENVILDKNKWNVMMYGDGRTKTIVSGHLNFIDGTPTFSTATFAVAGKGFIGKDMGFINTAAQGKKDINQNSGISIQKCTFSAYNDSLTAPTYLGRPWKEFSTTVIMQSDIGAFLQPVGWKEWVSGQDPPSSIFYGEYQNTGPGSSVDKRVRWAGYRPSLTDAEAGKFTVRTFLNGEDWLPATSVKFDTSL | 1016 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 30728436 | 30739437 | + | ClCG07G014280.1 | Cla07g01358 | 277346 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01358 | 1016 | SUPERFAMILY | Pectin lyase-like | 250 | 490 | IPR011050 | - | |
Cla07g01358 | 1016 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 596 | 750 | IPR035513 | - | |
Cla07g01358 | 1016 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 42 | 205 | IPR035513 | - | |
Cla07g01358 | 1016 | CDD | PMEI-like_3 | 50 | 204 | - | - | |
Cla07g01358 | 1016 | SUPERFAMILY | Pectin lyase-like | 785 | 1012 | IPR011050 | - | |
Cla07g01358 | 1016 | PANTHER | PECTINESTERASE | 355 | 488 | - | - | |
Cla07g01358 | 1016 | PANTHER | PECTINESTERASE | 527 | 887 | - | - | |
Cla07g01358 | 1016 | PANTHER | PECTINESTERASE 1-RELATED | 39 | 354 | - | - | |
Cla07g01358 | 1016 | Gene3D | - | 781 | 889 | IPR012334 | - | |
Cla07g01358 | 1016 | Gene3D | - | 890 | 1016 | IPR012334 | - | |
Cla07g01358 | 1016 | Gene3D | - | 354 | 491 | IPR012334 | - | |
Cla07g01358 | 1016 | Gene3D | - | 250 | 353 | IPR012334 | - | |
Cla07g01358 | 1016 | PANTHER | PECTINESTERASE 1-RELATED | 887 | 1013 | - | - | |
Cla07g01358 | 1016 | PANTHER | PECTINESTERASE 1-RELATED | 355 | 488 | - | - | |
Cla07g01358 | 1016 | PANTHER | PECTINESTERASE 1-RELATED | 527 | 887 | - | - | |
Cla07g01358 | 1016 | PANTHER | PECTINESTERASE | 887 | 1013 | - | - | |
Cla07g01358 | 1016 | PANTHER | PECTINESTERASE | 39 | 354 | - | - | |
Cla07g01358 | 1016 | CDD | PMEI-like_3 | 598 | 749 | - | - | |
Cla07g01358 | 1016 | Pfam | Pectinesterase | 886 | 1001 | IPR000070 | GO:0030599|GO:0042545 | |
Cla07g01358 | 1016 | Pfam | Pectinesterase | 256 | 353 | IPR000070 | GO:0030599|GO:0042545 | |
Cla07g01358 | 1016 | Pfam | Pectinesterase | 354 | 476 | IPR000070 | GO:0030599|GO:0042545 | |
Cla07g01358 | 1016 | Pfam | Plant invertase/pectin methylesterase inhibitor | 596 | 745 | IPR006501 | GO:0004857 | |
Cla07g01358 | 1016 | Pfam | Plant invertase/pectin methylesterase inhibitor | 48 | 199 | IPR006501 | GO:0004857 | |
Cla07g01358 | 1016 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 594 | 750 | IPR035513 | - | |
Cla07g01358 | 1016 | SMART | PMEI_2 | 43 | 199 | IPR006501 | GO:0004857 | |
Cla07g01358 | 1016 | SMART | PMEI_2 | 591 | 745 | IPR006501 | GO:0004857 | |
Cla07g01358 | 1016 | ProSitePatterns | Pectinesterase signature 1. | 281 | 300 | IPR018040 | - | |
Cla07g01358 | 1016 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 46 | 204 | IPR035513 | - | |
Cla07g01358 | 1016 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 31 | 204 | IPR006501 | GO:0004857 | |
Cla07g01358 | 1016 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 576 | 749 | IPR006501 | GO:0004857 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01358 | Cla-Chr7:30728436 | Cla09g00813 | Cla-Chr9:8308978 | 9.80E-23 | dispersed | |
Cla01g00700 | Cla-Chr1:8217239 | Cla07g01358 | Cla-Chr7:30728436 | 2.81E-68 | transposed | |
Cla04g01212 | Cla-Chr4:27253432 | Cla07g01358 | Cla-Chr7:30728436 | 8.19E-33 | transposed | |
Cla11g01417 | Cla-Chr11:27735606 | Cla07g01358 | Cla-Chr7:30728436 | 5.61E-46 | transposed | |
Cla07g01358 | Cla-Chr7:30728436 | Cla09g00131 | Cla-Chr9:1312134 | 1.38E-32 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01358 | - | K01051 | jre:109004988 | 676.781 |