Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01390 | ATGCAATTGGTACCAAATCATGATGAAAATAAAGATGATATTCTGGAGCGTGCACCCATTTTAAGTCACTTGGATTTTCTGCCACAGTCTGTGGGATCATCATCCTCTGCTGAGATTGCTGAGATTATAGCTATAGGGAGAGAGAGTTCAGTTAGTGATGATGATTTACACAATCTTATTGTTGATGAAACTTGTCATCTGGTGAATGCAGACCAACCACAATGTCGTATATGCCTTGACACTGGAGGAGAAGATTTGATTGCTCCATGCCACTGCAAAGGCACTCAAAAGTATGTCCATAGATCTTGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTGAAGTTTCAATTTCTTGTTGCTAGGGACCATGCGTTCATTTTCATCATTGTTCAGCTGATTGTGGCATTCTTAGGGGTGTTGGTGTACAAATTTTACGGAGAGGAACTAAGGGAAATGTTTGGTTATGAAGAACACCCATATGGATTCTATGCCATGGCTGTCTTAGCTATCATCTTGGTTGGTTTACTCTATGGTTTCTTCATAGCCATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTCGCTAAGCAAGAACTGACAAAGGAATATATAGTTGAAGATCGAGAACATAACAAGAACGTTCCTGAATTAGACCCCAGTCACGTTATGGAGCTAAGGATGTTGGGCCTGTATTAA | 789 | 41.83 | MQLVPNHDENKDDILERAPILSHLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNLIVDETCHLVNADQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKNVPELDPSHVMELRMLGLY | 262 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 31024191 | 31029275 | - | ClCG07G014630.1 | Cla07g01390 | 277378 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01390 | 262 | SUPERFAMILY | RING/U-box | 70 | 126 | - | - | |
Cla07g01390 | 262 | PANTHER | OS02G0132300 PROTEIN | 2 | 261 | - | - | |
Cla07g01390 | 262 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 2 | 261 | - | - | |
Cla07g01390 | 262 | Pfam | RING-variant domain | 75 | 122 | IPR011016 | GO:0008270 | |
Cla07g01390 | 262 | CDD | RING_CH-C4HC3_MARCH | 75 | 123 | - | - | |
Cla07g01390 | 262 | SMART | ringv_2 | 74 | 123 | IPR011016 | GO:0008270 | |
Cla07g01390 | 262 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 67 | 129 | IPR011016 | GO:0008270 | |
Cla07g01390 | 262 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 68 | 127 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla06g01069 | Cla-Chr6:23193123 | Cla07g01390 | Cla-Chr7:31024191 | 3.37E-39 | dispersed | |
Cla07g01390 | Cla-Chr7:31024191 | Cla11g00700 | Cla-Chr11:8790546 | 8.49E-06 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01390 | - | - | bhj:120075028 | 519.235 |