Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01443 | ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTCAATTCCCGGCAGAAGTGATGGACGTAGAAACGATGATGGAACAGAAGAGGAGTCTATGCTCTGTTGATGAGAGCGCTCTCACTTCTCTTACATCCAAGCGACCCAAGACTGATTTCTCCATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTTTGTTGCAGGAGCTGGAGGCATGCAGCCACAGCCTGAGGAGCAGAGGCCTATGTCTTGTTCCAATCTCGTATACTGCTGGAGTTGCGCGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCCAAATTTGAGAAGCCTATCTCACCATTCAATTGA | 504 | 47.82 | MIASSLCNASAQFPAEVMDVETMMEQKRSLCSVDESALTSLTSKRPKTDFSISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQELEACSHSLRSRGLCLVPISYTAGVARSNGADIWAPVKTISPKFEKPISPFN | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 31685269 | 31690151 | + | ClCG07G015210.1 | Cla07g01443 | 277431 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01443 | 167 | PANTHER | TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 | 18 | 151 | - | - | |
Cla07g01443 | 167 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 45 | 94 | IPR011598 | GO:0046983 | |
Cla07g01443 | 167 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 50 | 108 | IPR036638 | GO:0046983 | |
Cla07g01443 | 167 | SMART | finulus | 53 | 100 | IPR011598 | GO:0046983 | |
Cla07g01443 | 167 | CDD | bHLH_AtbHLH_like | 51 | 102 | IPR045239 | - | |
Cla07g01443 | 167 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 18 | 151 | - | - | |
Cla07g01443 | 167 | Gene3D | - | 42 | 124 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01443 | Cla-Chr7:31685269 | Cla10g00559 | Cla-Chr10:7928896 | 5.11E-33 | dispersed | |
Cla09g01956 | Cla-Chr9:37128493 | Cla07g01443 | Cla-Chr7:31685269 | 2.55E-19 | dispersed | |
Cla07g01443 | Cla-Chr7:31685269 | Cla01g02186 | Cla-Chr1:35906597 | 2.87E-32 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01443 | - | - | csv:101218499 | 307.375 |