Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01443 ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTCAATTCCCGGCAGAAGTGATGGACGTAGAAACGATGATGGAACAGAAGAGGAGTCTATGCTCTGTTGATGAGAGCGCTCTCACTTCTCTTACATCCAAGCGACCCAAGACTGATTTCTCCATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTTTGTTGCAGGAGCTGGAGGCATGCAGCCACAGCCTGAGGAGCAGAGGCCTATGTCTTGTTCCAATCTCGTATACTGCTGGAGTTGCGCGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCCAAATTTGAGAAGCCTATCTCACCATTCAATTGA 504 47.82 MIASSLCNASAQFPAEVMDVETMMEQKRSLCSVDESALTSLTSKRPKTDFSISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQELEACSHSLRSRGLCLVPISYTAGVARSNGADIWAPVKTISPKFEKPISPFN 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31685269 31690151 + ClCG07G015210.1 Cla07g01443 277431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01443 167 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 18 151 - -
Cla07g01443 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Cla07g01443 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 108 IPR036638 GO:0046983
Cla07g01443 167 SMART finulus 53 100 IPR011598 GO:0046983
Cla07g01443 167 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Cla07g01443 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 18 151 - -
Cla07g01443 167 Gene3D - 42 124 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01443 Cla-Chr7:31685269 Cla10g00559 Cla-Chr10:7928896 5.11E-33 dispersed
Cla09g01956 Cla-Chr9:37128493 Cla07g01443 Cla-Chr7:31685269 2.55E-19 dispersed
Cla07g01443 Cla-Chr7:31685269 Cla01g02186 Cla-Chr1:35906597 2.87E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01443 - - csv:101218499 307.375