Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01463 ATGATGGAAAATTTCCCTAATTTTCTCTCTACTTCATCCTCTTCATCCTCCCTCTCTCTCCATCAAATGGTGTTTTCTCGAGCTTCCCAGCTCGTCGAAATGCAACGAGGAGACTGTTTTACACAGCCACCACCCGTCTCCGGTGGGTTTCCGCTGTTTCGCGACGTTCCGACAGACGACATGTCGTTCGATGCGACGAGTAGAATGAAGGACGACGACATCGGCGTTCCGCTTAGTAAAAGATTTCATGTTGATGAGTCTGCTAGGAATGGAGTAGATGGGTTGGAGAAGAAGGAGGCTGTGATGGCGGGAACGACGACAACGACGACAACAGGACGGGGAGATTATGATAAGAGAAAGAAGATGAGAAGCCGGAGATTTGCTTTTCAAACGAGAAGTCAAGTTGATATTCTTGATGATGGTTATAGATGGAGAAAATATGGACAGAAGGCTGTGAAGAACAACAAATTCCCAAGAAGTTACTATAGATGTACACACCAAGGTTGCAAAGTGAAGAAGCAAGTCCAAAGGCTAACTAGAGATGAAGGGGTGGTTGTGACAACTTATGAAGGCATTCATTCTCATCCTATTGAGAAATCCACTGACAACTTTGAGCATATTTTGAGTCAGATGCAAATTTACACTTCTTATTGA 654 44.19 MMENFPNFLSTSSSSSSLSLHQMVFSRASQLVEMQRGDCFTQPPPVSGGFPLFRDVPTDDMSFDATSRMKDDDIGVPLSKRFHVDESARNGVDGLEKKEAVMAGTTTTTTTGRGDYDKRKKMRSRRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCKVKKQVQRLTRDEGVVVTTYEGIHSHPIEKSTDNFEHILSQMQIYTSY 217
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31931187 31935499 + ClCG07G015440.1 Cla07g01463 277451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01463 217 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 108 214 - -
Cla07g01463 217 Pfam WRKY DNA -binding domain 139 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla07g01463 217 Gene3D WRKY domain 123 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla07g01463 217 SUPERFAMILY WRKY DNA-binding domain 130 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla07g01463 217 SMART WRKY_cls 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla07g01463 217 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 214 IPR044810 GO:0003700
Cla07g01463 217 ProSiteProfiles WRKY domain profile. 133 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00137 Cla-Chr5:1275566 Cla07g01463 Cla-Chr7:31931187 4.16E-37 dispersed
Cla05g01424 Cla-Chr5:19800519 Cla07g01463 Cla-Chr7:31931187 8.74E-61 dispersed
Cla07g01463 Cla-Chr7:31931187 Cla11g00902 Cla-Chr11:15370665 1.05E-58 dispersed
Cla10g01103 Cla-Chr10:25306121 Cla07g01463 Cla-Chr7:31931187 2.70E-32 dispersed
Cla10g02153 Cla-Chr10:37141897 Cla07g01463 Cla-Chr7:31931187 3.43E-17 dispersed
Cla07g01463 Cla-Chr7:31931187 Cla07g00746 Cla-Chr7:20796642 8.22E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61479 PF03106 WRKY 1.20E-25 CL0274 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01463 - - cmo:103494564 300.827