Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01481 ATGGCGGTTGGGAGTACTGTATCAGTTTTCTGCTCTTCTTCCTTAACTCTTCTTCTTCTTCTTCTGCTGCTCGTATTTCCATTTGGGTCTAATTCTGAGGATCTAAAAGCTTGCAAGTTTGATGCCATATTTCAGTTTGGGGATTCCTTAGCTGACACTGGAAATCTGATACGAGAGAACCCTTCAACTCCTTTTTCTCATCTTCCTTATGGTGAAACTTTCTTTAAGAAAGCCACTGGAAGATGTTCTAATGGCTTACTTATGGTAGATTACTTTGCTTTGGCAGCGGGACTTCCTTTGGTGAATCCCTACTTGAAAAAGAAGGCATCTTTCACTCATGGAGTGAATTTTGCAGTGGCTGGCTCTACTGCTTTGTCTTTGAATGTTCTTGCTCAAAACAACATCTCATCTCCGGTTACCAACACATCTTTGAGTAAACAACTTGAATGGATGCATTCATATCTCAATACTATTTGTTCTAACAAAAGAGATTGTACTAAGAAGTTAAAGCATGCATTATTTTTTATGGGGGAGATTGGAGGGAATGATTATAACTATGCTCTATTTGAAGGCAAAACTGTTGCTGAAGTAAAAAATATGGTACCTGGAGTTGTACAAACAATAATAGATGCTACTAGAAGGGTCATCGATTATGGTGCTACTCGAGTTATTATTCCAGGACATTTCTCAATGGGTTGCCTACCAATCTACCTCACTGGCTTTCAAACCAATGATTCAACTGCTTATGACAAGTTTCACTGTTTAAAGGATTTCAACGGTTTAGCAAGTTATCATAATAACAAATTGAAGCAAGCTATCAAGGTGTTGAGAAAAGAGAATCCTAACACCATCATTACATATGGTGATTATTATAATGCATTATTTTGGATTTTTCGACATGCTTCTTTGCTTGGATTTGATAAAACATCCCTACAAAAGTCTTGTTGCGGAACAGGAGGGTCTCAAGGCCTTGAAGTCTCAGCTCAGGGGCTTGGGTGCATGGGCATGTCCTCATACTACGGCCCTGCTCAGCCACAAGAAGACATGATTGCCCTCATCCACCGCGCCGTCGAGGCCGGGGTCACCTTCTTGGATACCTCAGACATATACGGCCCTTTCACCAACGAGACCCTCCTTGGAAAGGCTCTTAAGGCCGATGGGCTTAGGGACAAGGTTCAGTTGGCTACCAAATTTGGGCTCCATCTCGCCCACGGTAACTTCGAGGTCCACGGCCATCCGGCCTATGTTAGGGCCGCGTGTGAGGCCAGCTTGGACCGCCTTGGGGTTCATTGTATCGATCTCTATTATCAGCATCGGATCGATACTAAAGTTCCCATTGAAATCACGATTGGGGAGCTGAAGAAATTGGTTGAAGAAGGGAAAATAAAGTACATAGGTTTATCTGAAGCTTCAGCCTCTACCATTAGAAGAGCTCATGCAGTTCATCCAATTACAGCAGTTCAAATCGAATGGTCTTTGTGGGCCAGAGATGTTGAACAAGATATCATTCCTACTTGCAGGGAACTGGGCATTGGAATTGTGGCATACAGTCCTCTGGGAAGGGGTTTTCTATCTTCTGGGGCCAACTTCATTGAAAACTTAACAGATGATGACTACAGAAAGAAACTCCCTCGATTTCAACCCGAAAACTTGGAGCACAACAAGAGCATATTCGAAAAGGTTAGCGAATTGGCAGCTAGAAAAGGGTGCACCACATCTCAGCTAGCCTTAGCATGGGTTCACCACCAAGGGACCGATGTGGTTCCAATTCCTGGAACCACTAAGCTTAAAAATCTGCAATCAAACATTGAAGCTTTGTCATTGAAACTTACACCAGAAGAAATGGCTGAACTTGAAGCCTATGCTTTAGCTGATGGAGTTAAAGGAGACAGATATGGTGATGACATTTCCACTTGGAAACAATCTGAAACCCCACCACTTTCTTCATGGAAATTTTGA 1959 42.62 MAVGSTVSVFCSSSLTLLLLLLLLVFPFGSNSEDLKACKFDAIFQFGDSLADTGNLIRENPSTPFSHLPYGETFFKKATGRCSNGLLMVDYFALAAGLPLVNPYLKKKASFTHGVNFAVAGSTALSLNVLAQNNISSPVTNTSLSKQLEWMHSYLNTICSNKRDCTKKLKHALFFMGEIGGNDYNYALFEGKTVAEVKNMVPGVVQTIIDATRRVIDYGATRVIIPGHFSMGCLPIYLTGFQTNDSTAYDKFHCLKDFNGLASYHNNKLKQAIKVLRKENPNTIITYGDYYNALFWIFRHASLLGFDKTSLQKSCCGTGGSQGLEVSAQGLGCMGMSSYYGPAQPQEDMIALIHRAVEAGVTFLDTSDIYGPFTNETLLGKALKADGLRDKVQLATKFGLHLAHGNFEVHGHPAYVRAACEASLDRLGVHCIDLYYQHRIDTKVPIEITIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQIEWSLWARDVEQDIIPTCRELGIGIVAYSPLGRGFLSSGANFIENLTDDDYRKKLPRFQPENLEHNKSIFEKVSELAARKGCTTSQLALAWVHHQGTDVVPIPGTTKLKNLQSNIEALSLKLTPEEMAELEAYALADGVKGDRYGDDISTWKQSETPPLSSWKF 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32099265 32106046 + ClCG07G015570.1 Cla07g01481 277469

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01481 652 PANTHER AFLATOXIN B1 ALDEHYDE REDUCTASE 320 650 - -
Cla07g01481 652 Pfam Aldo/keto reductase family 333 620 IPR023210 -
Cla07g01481 652 SUPERFAMILY NAD(P)-linked oxidoreductase 320 624 IPR036812 -
Cla07g01481 652 CDD SGNH_plant_lipase_like 42 320 IPR035669 -
Cla07g01481 652 Pfam GDSL-like Lipase/Acylhydrolase 43 321 IPR001087 GO:0016788
Cla07g01481 652 PANTHER ALDO-KETO REDUCTASE 4-RELATED 320 650 - -
Cla07g01481 652 CDD AKR_AKR13D1 320 618 - -
Cla07g01481 652 Gene3D - 318 648 IPR036812 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01481 - - - csv:105434441 617.846
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01468 Cla-Chr7:31958853 Cla07g01481 Cla-Chr7:32099265 0 dispersed
Cla07g01481 Cla-Chr7:32099265 Cla09g01619 Cla-Chr9:32381359 8.97E-153 dispersed
Cla11g01620 Cla-Chr11:29878003 Cla07g01481 Cla-Chr7:32099265 1.93E-19 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1074 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone15ag0623 . . . . . . Blo02g00409 . . Bda13g00295 . . . . . . . . . . . . . . . . . . . . Cla07g01481 Cam07g1578 Cec07g1677 Cco07g1638 Clacu07g1569 Cmu07g1537 Cre07g1913 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016358 0 0 0 0 0 1 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 8