Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01490 | ATGGAAAAAACACTAAACATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACAGGAAGAGAGGAAAGAACGAAGCAGACGATGAGAAGCGTGAGCTTGTTTTCAAGGAAGATGGTCAGGAGTATGCCCAAGTTCTCAGAATGTTAGGGAATGGTCGGTGCGAGGCGATGTGCATCGATGGGACAAAGCGACTTTGCCATATCCGGGGGAAGATGCACAAAAAAGTTTGGATTGCAGCTGGTGATATAATACTTGTGGGGCTTCGTGACTACCAGGATGACAAAGCTGATGTTATCCTCAAGTATATGCCTGATGAAGCAAGGCTGTTGAAAGCATATGGTGAACTTCCAGAGAGCACACGTCTCAACGAGGGTATTGCTGGTGGTATCGATGATGAGGATGATGGTGGCGCTGATGATTATCTTGAGTTTGAGGATGAAGATATCGACAAGATTTAG | 456 | 45.83 | MEKTLNMPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGIDDEDDGGADDYLEFEDEDIDKI | 151 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 32154329 | 32161060 | + | ClCG07G015640.2 | Cla07g01490 | 277478 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01490 | 151 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cla07g01490 | 151 | Pfam | Translation initiation factor 1A / IF-1 | 38 | 99 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Cla07g01490 | 151 | TIGRFAM | eIF-1A: translation initiation factor eIF-1A | 20 | 116 | IPR001253 | GO:0003743|GO:0006413 | |
Cla07g01490 | 151 | ProSitePatterns | Eukaryotic initiation factor 1A signature. | 47 | 69 | IPR018104 | GO:0003743|GO:0006413 | |
Cla07g01490 | 151 | PANTHER | EIF-1A | 7 | 151 | IPR001253 | GO:0003743|GO:0006413 | |
Cla07g01490 | 151 | CDD | S1_IF1A | 39 | 115 | IPR001253 | GO:0003743|GO:0006413 | |
Cla07g01490 | 151 | SMART | eIF1neu4 | 34 | 116 | IPR001253 | GO:0003743|GO:0006413 | |
Cla07g01490 | 151 | Hamap | Translation initiation factor 1A [eif1a]. | 22 | 116 | IPR001253 | GO:0003743|GO:0006413 | |
Cla07g01490 | 151 | Gene3D | - | 8 | 151 | IPR012340 | - | |
Cla07g01490 | 151 | SUPERFAMILY | Nucleic acid-binding proteins | 8 | 150 | IPR012340 | - | |
Cla07g01490 | 151 | ProSiteProfiles | S1 domain IF1 type profile. | 28 | 102 | IPR006196 | GO:0003723|GO:0003743|GO:0006413 | |
Cla07g01490 | 151 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE | 7 | 151 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g00238 | Cla-Chr2:2438169 | Cla07g01490 | Cla-Chr7:32154329 | 2.11E-80 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01490 | K03236 | - | ini:109155805 | 265.388 |