Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01490 ATGGAAAAAACACTAAACATGCCGAAGAACAAGGGAAAGGGAGGAAAGAACAGGAAGAGAGGAAAGAACGAAGCAGACGATGAGAAGCGTGAGCTTGTTTTCAAGGAAGATGGTCAGGAGTATGCCCAAGTTCTCAGAATGTTAGGGAATGGTCGGTGCGAGGCGATGTGCATCGATGGGACAAAGCGACTTTGCCATATCCGGGGGAAGATGCACAAAAAAGTTTGGATTGCAGCTGGTGATATAATACTTGTGGGGCTTCGTGACTACCAGGATGACAAAGCTGATGTTATCCTCAAGTATATGCCTGATGAAGCAAGGCTGTTGAAAGCATATGGTGAACTTCCAGAGAGCACACGTCTCAACGAGGGTATTGCTGGTGGTATCGATGATGAGGATGATGGTGGCGCTGATGATTATCTTGAGTTTGAGGATGAAGATATCGACAAGATTTAG 456 45.83 MEKTLNMPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLNEGIAGGIDDEDDGGADDYLEFEDEDIDKI 151
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32154329 32161060 + ClCG07G015640.2 Cla07g01490 277478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01490 151 MobiDBLite consensus disorder prediction 1 30 - -
Cla07g01490 151 Pfam Translation initiation factor 1A / IF-1 38 99 IPR006196 GO:0003723|GO:0003743|GO:0006413
Cla07g01490 151 TIGRFAM eIF-1A: translation initiation factor eIF-1A 20 116 IPR001253 GO:0003743|GO:0006413
Cla07g01490 151 ProSitePatterns Eukaryotic initiation factor 1A signature. 47 69 IPR018104 GO:0003743|GO:0006413
Cla07g01490 151 PANTHER EIF-1A 7 151 IPR001253 GO:0003743|GO:0006413
Cla07g01490 151 CDD S1_IF1A 39 115 IPR001253 GO:0003743|GO:0006413
Cla07g01490 151 SMART eIF1neu4 34 116 IPR001253 GO:0003743|GO:0006413
Cla07g01490 151 Hamap Translation initiation factor 1A [eif1a]. 22 116 IPR001253 GO:0003743|GO:0006413
Cla07g01490 151 Gene3D - 8 151 IPR012340 -
Cla07g01490 151 SUPERFAMILY Nucleic acid-binding proteins 8 150 IPR012340 -
Cla07g01490 151 ProSiteProfiles S1 domain IF1 type profile. 28 102 IPR006196 GO:0003723|GO:0003743|GO:0006413
Cla07g01490 151 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A-LIKE 7 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00238 Cla-Chr2:2438169 Cla07g01490 Cla-Chr7:32154329 2.11E-80 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01490 K03236 - ini:109155805 265.388