Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01493 ATGGTTTGGTCTGCAATGGGGTTATTCTTGTTGGTGGATTTGGTTGTTTTGTTCTTGAAGAAGATGTGTGGTTGGAGAGGTGGATTGTTTGTGGAATTGGTTGTTTTTGCAGATATGTGTTTGTTGGTGTCGGGTTTAGGTTCAATGTCCCCTGTTGCTGTTTCTTATGGGGAGAAAGGGCCTGTTTTCTGTGGTTTAAAGTCAGATGGGTCTCATCTTGTGAGCTGTTTTGGTTCAAATTCAGCCATAACTTATGGAACCCCTTCTCATTTCCCATTCATTGGTCTCACTGCTGGTGATGGGTTTGTTTGTGGGCTTCTTTTGGATTCCAACCAACCTTATTGTTGGGGAAGCAGTGGCTATGTTCAAATGGGTGTTCCTCAGCCCATGATCAAAGGAGCTCAATACCTGGAAATTAGTGCTGGTGATTATCATCTGTGTGGACTTCGAACGCCTCTGACTGGAAGGCGTAGGAACACTTCGTTTGTCGATTGTTGGGGTTACAACATGACCAGAACCTTTGCTTTTGATGGCCCTATTGAATCGATCTCTGCGGGGTCTGAGTTCAACTGTGGGCTGTTCTCTCTTAATAGAACTGTTTTCTGTTGGGGTGATGAGACAAGCAGCCGGGTAATCAGTTTGATTCCTAAAGATATGAGGTTTCAAAGGATTGCATCCGGTGGATATCATGTTTGCGGAATTTTAGAGGGCGCAAATTCGAGAGCATTCTGTTGGGGAAGGAGCTTAGACATTGAAGAGGAGATCTCAGTAGCATATTCAGGTGAAGGAAATGTAGACTTGGTTCCAGTTGATCCATTAGACTCTGTTGTTGGGGGCAAATTCCATGCCTGTGGAATAAAGAGCTTAGACCGTGGTGTGATTTGTTGGGGTTTTACGGTTAAGCCAAGTACTCCAGCACCAGATGGGATTAAAGTTTACGACATTGCAGCTGGAGATTACTTCACCTGTGGAATTCTAGCTGAAAAATCTCTCCTGCCTGTTTGCTGGGGTCTTGGATTTCCTACTTCTCTGCCTTTGGCTGTCTCACCTGGAATCTGTAAAGCGACTCCTTGTGCCCCTGGTTTCTACGAAATTAGCCAAGACAAAGCTCGGTGTAAATCGCCGAGTTTTCATGTGTGTTTGCCCTGCAGTACTGCTTGCCCTCCTGATATGTACCAAAAATTTGAGTGCTCCTCAAAATCTGATAGGCAGTGTGAATATAATTGTTCAAGTTGCTTTTCAAGTGAATGCCTCTCAAACTGCTCATCCATGCTTTCAACTGGCATGATGGGGAAGAAAAATGGGAAGTACTGGCCTACGCAGCAGCTTCCAGTTCTTGTTGCTGAGATTGCTTTTGCTGTGTTTTTGGTAGCTATTGTGTCTTTAACTGCAATCTTATATGTTCGATACAAGTTACGGAATTGCCATTGCTCGGGAAAGGAGTTGAAGTCTAAGAAAAACAAAGGGACTGCCTCTTCCTTCCAGAAGGAAAGCTATAAAATACGTCCTGACTTGGATGAGCTGAAAATAAGGAGGGCTCAGATGTTCACCTACGAAGAACTTGAGAGAGCGACATGTGGGTTTAAGGAAGAGTCTATTGTGGGAAAGGGAAGTTTCTCTTGTGTTTTTCGAGGCGTTTTAAAGGACGGGACAGTCGTAGCAGTAAAACGGGCTATAATGTCTCCCAACATGCAGAAGAATTCAAAGGAGTTCCATACTGAACTTGACTTGCTATCAAGATTAAACCATGCCCATTTGCTTAATCTGCTTGGTTATTGTGAAGAAGGTGGAGAGAGGCTTCTGGTTTATGAGTTCATGGCTCATGGTTCCTTGCATCAGCACCTCCATGGCAAGAACACGGCCTTAAAAGAACAATTAGATTGGATAAGAAGGGTCACAATTGCAGTCCAAGCAGCTAGAGGAATCGAATACTTGCATGGCTATGCTTGTCCTCCAGTCATTCATCGAGACATTAAGTCGTCAAACATTCTCATCGATGAAGAACATAATGCTCGAGTCGCTGATTTTGGCTTGTCATTGTTGGGACCGACTGATAGTAGCTCTCCATTAGCCGAGCTACCAGCTGGGACTCTTGGCTATCTCGATCCTGAATACTATAGACTTCATTACCTTACCACCAAGTCTGATGTGTATAGCTTTGGTGTTTTGCTACTAGAAATTCTCAGTGGTAGAAAAGCCATTGATATGCAATATGAAGAAGGGAACATAGTAGAATGGGCAGTGCCTCTGATAAGATCAGGAGATATCTCTGCAATTTTAGATCCGATATTGAAACCGCCCCCCGATATCGAGGCCTTGAAGAGGATTGCAAATGTAGCCTGTAAATGTGTGAGAATGAGGGCAAAGGAGAGGCCATCAATGGACAAAGTGACAACTGCATTGGAGCGTGCTCTTGCCCAATTAATGGGAAGCCCGTGTAACGAACAACCAATCTTACCAACCGAGGTGGTCTTGGGAAGCAGCAGACTACACAAAAAGTCATCTCAAAGATCATCGAACCATTCAGTCTCCGAAACAGATATAGCAGAAGCTGAGGATCAAAGGTTCGAATTCAGGGCTCCGTCGTGGATTACATTCCCGAGTGTGACGTCATCGCAGAGGAGGAAATCCTCAGTGTCTGAAGCAGATGTAGATGGAAAGAATTTGGAAGGAAGAAATGTAGGGAATGGTGGAGGTGTTGGGGATGGATTGAAGAGTTTAGAGGAAGAGATTGGGCCTGCTTCCCCTCAAGAAAAGTTGTTCTTGGAGCACAATTTCTAA 2781 44.37 MVWSAMGLFLLVDLVVLFLKKMCGWRGGLFVELVVFADMCLLVSGLGSMSPVAVSYGEKGPVFCGLKSDGSHLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMIKGAQYLEISAGDYHLCGLRTPLTGRRRNTSFVDCWGYNMTRTFAFDGPIESISAGSEFNCGLFSLNRTVFCWGDETSSRVISLIPKDMRFQRIASGGYHVCGILEGANSRAFCWGRSLDIEEEISVAYSGEGNVDLVPVDPLDSVVGGKFHACGIKSLDRGVICWGFTVKPSTPAPDGIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPTSLPLAVSPGICKATPCAPGFYEISQDKARCKSPSFHVCLPCSTACPPDMYQKFECSSKSDRQCEYNCSSCFSSECLSNCSSMLSTGMMGKKNGKYWPTQQLPVLVAEIAFAVFLVAIVSLTAILYVRYKLRNCHCSGKELKSKKNKGTASSFQKESYKIRPDLDELKIRRAQMFTYEELERATCGFKEESIVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNTALKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIRSGDISAILDPILKPPPDIEALKRIANVACKCVRMRAKERPSMDKVTTALERALAQLMGSPCNEQPILPTEVVLGSSRLHKKSSQRSSNHSVSETDIAEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKNLEGRNVGNGGGVGDGLKSLEEEIGPASPQEKLFLEHNF 926
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32174037 32177153 - ClCG07G015670.2 Cla07g01493 277481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01493 926 Gene3D Transferase(Phosphotransferase) domain 1 606 813 - -
Cla07g01493 926 Gene3D - 43 354 IPR009091 -
Cla07g01493 926 Gene3D Phosphorylase Kinase; domain 1 499 605 - -
Cla07g01493 926 MobiDBLite consensus disorder prediction 829 848 - -
Cla07g01493 926 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 357 405 IPR001368 GO:0005515
Cla07g01493 926 ProSiteProfiles Protein kinase domain profile. 528 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01493 926 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Cla07g01493 926 SMART TNFR_3 372 405 IPR001368 GO:0005515
Cla07g01493 926 CDD STKc_IRAK 534 803 - -
Cla07g01493 926 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 28 926 - -
Cla07g01493 926 SUPERFAMILY RCC1/BLIP-II 47 298 IPR009091 -
Cla07g01493 926 PANTHER RECEPTOR-LIKE KINASE 28 926 - -
Cla07g01493 926 Pfam Protein kinase domain 528 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01493 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Cla07g01493 926 SUPERFAMILY Protein kinase-like (PK-like) 510 801 IPR011009 -
Cla07g01493 926 MobiDBLite consensus disorder prediction 869 916 - -
Cla07g01493 926 MobiDBLite consensus disorder prediction 829 845 - -
Cla07g01493 926 SMART serkin_6 528 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00879 Cla-Chr4:23792397 Cla07g01493 Cla-Chr7:32174037 6.48E-112 dispersed
Cla07g01493 Cla-Chr7:32174037 Cla08g00253 Cla-Chr8:5230953 3.63E-103 dispersed
Cla11g01312 Cla-Chr11:26637580 Cla07g01493 Cla-Chr7:32174037 1.30E-50 dispersed
Cla07g01493 Cla-Chr7:32174037 Cla05g02627 Cla-Chr5:37465029 1.14E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80708 PF00069 Pkinase 1.40E-43 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01493 - - csv:101210393 1793.09