Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01499 ATGGCAAACTCGATGGCTAGATCTTTTTTGCAGGTTGCTGCTACGGAAGAGGTTGCTTCTCCTCTCCGAGTTGTTCAGATTGAAGGATTGGTTATATTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCAGCTCTTGTTACCGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGCTTTCCCTTCCCGACTCGGGAGGAGGATGAGGAGATTGAAGCCGATGGTGCTAATTACCAGCTTGAAATGATGAGATGCTTGAGAGAAGTCAATGTTGACAATAACACTGTTGGATGGTACCAGTCGACCTTCTTAGGTTCATATCAGACTGTAGAGCTGATTGAGACCTTTATGAATTATCAGGAAAATATCAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGGTCTAATCAAGGTGTCTTAGCTCTCAAAGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCACTAACAGCTTTACAGGAGAGAAGTTGAGGGAGAAGAACTTATCATGGGTGGATATTTTTGAGGAAATACCTATCAAAGTTTCGAATTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGACTCTCCAGTCACCCAGTGTGATTATGACCGCCTGCAACTTTCAACAAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCAGTGGAGCAGCAGAAGTTCCAATTTTATTATCGGAGCCTGACCCGTCAGCAAGCTCAACAACAAGCATGGCTTCAGAAAAGAAGGGCTGAGAACATGATGAGGAAGGCAGCAGGAGAAGAGCCTCTCCCTGAGGAGGATCCTACAAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACGAATCAAATAGCAAACTATTGCAATCAAATTAATGGGGTTGCTGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCCCTTCACGACAATTAA 1014 43.0 MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMMRKAAGEEPLPEEDPTNPIFKPLPEPSRLDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32232259 32236642 + ClCG07G015740.1 Cla07g01499 277487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01499 337 ProSiteProfiles MPN domain profile. 25 158 IPR037518 -
Cla07g01499 337 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 4 337 - -
Cla07g01499 337 Gene3D Cytidine Deaminase, domain 2 1 214 - -
Cla07g01499 337 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 23 126 IPR000555 GO:0005515|GO:0008233|GO:0008237
Cla07g01499 337 CDD MPN_eIF3h 23 286 IPR027524 GO:0003743|GO:0005737|GO:0005852
Cla07g01499 337 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 20 337 IPR027524 GO:0003743|GO:0005737|GO:0005852
Cla07g01499 337 Pfam C-terminal region of eIF3h 143 335 IPR045810 -
Cla07g01499 337 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 4 337 - -
Cla07g01499 337 SMART pad1_6 24 157 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01499 K03247 - csv:101211860 666.766