Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01500 ATGGCTTTCCTCTGTTTCTTGGCCCTTTCCCTTTTGGGATCCATGACCATTCTTCTTCAGAATTGCATTGCCTTCAATGTGGTTTCCCCTCAACTCAACGACGATATTCTCGGCTTGATTGTCTTCAAGTCCGATCTCCATGACCCTTCTTCCTTTCTCTCCTCCTGGAATGAAGACGATGATTCCCCTTGTTCCTGGGAGTTCGTTAAATGCAACCCCATTAATGGCAGAGTGTCCGAGGTTTCTATTGATGGGTTGGGGCTATCAGGGAGAATCGGAAGAGGGCTTGAGAAATTGCAGCATCTCAAGGTATTGTCTCTCTCTGGTAATAATTTCACTGGCAATCTTAGTCCTCAGCTTAGTCTTCCTCCCAGTCTCGACAGAGTTAATTTCAGTCGTAATAGTTTATCTGGGCGGATTCCCACTTCTCTAATCTCTATGTCCTCCATTAGATTTCTTGATTTTTCTGATAATCTCTTATCTGGGCCTCTTCCTGATGAAATGTTTCTTAACTGTTCTTCGCTTCATTTTCTCTCTCTTGCGTCTAATATGCTTCAAGGCCCTGTTCCCAACACGTTGCCCACAAGGTGTTTGTATTTAAACACTCTCAATCTTTCAGCCAATCAATTCTCTGGTAGCTTGAATTTTGCGCCGGGGGTTTGGTCTTTGACAAGGCTCAGGACATTGGATCTTTCAAACAATGCTTTCTCTGGATATTTACCACAAGGGGTTTCAGCCATCCATAATCTAAAAGAGCTCAAGTTGCAGAACAATCAATTCACAGGTCCATTGCCTGCAGACTTAGGATTATGCATCCACTTGGTTACATTGGATGTCAGCCGGAACCGTCTCACGGGACCGCTACCCGATTCAATGAGACTCTTAACCTCCTTGACCTTTTTCAACATAGGATACAACACGTTTTCAGGTGAGCTACCACAGTGGATTGGGAACATGACCAGCTTGGAATACTTGGAATTTTCAAGCAATGGCTTCACTGGCAGTCTTCCCTTGGCAATGGGGGGATTAAGATCTGTGAAATACATGAGTTTTTCAAACAACAAGCTGTCTGGGAACATCCCAGAGACATTGATGGAATGTTCTGAGCTATCTGTGATCAAGCTTGAAGGAAATAACTTGAATGGAAGGGTGCCAGAAGGGTTGTTCGAACTGGGTTTGGAGGAGATGGTTTTGTCTCAGAATGAGCTGATTGGTTCGATCCCAGTAGGGTCAAGCAGGCTGTATGAGAAGCTAACAAGAATGGACTTGTCAAGGAACAGATTAGAAGGAAACTTTCCAGCAGAAATGGGACTGTACAGAAATTTGAGGTACTTGAATCTTTCATGGAACAACTTTAAGACAAAGATTCCACCAGAAATGGGGTTGTTTCAGAATTTGAATGTGTTGGACATTAGAAGCAGTGATCTGTATGGTTCAATTCCTGGAGAATTGTGTGATTCTGGGAGTTTGGGGATTCTTCAGCTTGATGGAAACTCTTTGATTGGTCCAATTCCTGACGAGATTGGGAATTGTCTCTCACTTTACTTGCTGAGTTTATCCCACAACAATCTAAGTGGAGCAATCCCAAAGTCAATCTCCAAGCTAAGCAAGCTAGAGATTCTAAGACTTGAATCAAATCAACTGAGTGGAGAAATACCTCAAGAGCTTGGAATTCTTCAAAACCTGCTTGCTGTTAACATTTCGTACAATATGCTAACAGGCAGGCTTCCTGTTGGTGGCATTTTTCCAAGCTTGGATCAAAGTGCTTTGCAAGGGAACTTAGGCCTTTGCTCCCCTTTGCTCAAAGGACCTTGCAAAATGAATGTCCCTAAGCCCCTTGTTCTTGACCCCAATGCCTATCCCAACCAAATGGGCGGCCAAAGCAGCAGAAACAACCCCTCACAATACTCTAATCCTTCCCCCCATCATGTCTTCTTCAGTGTCTCTGCCATTATTGCCATTTCTGCTGCCATTTTGATTGCCCTTGGGGTGCTTGTAATCACCTTGCTCAATGTCTCCGCTCGGAGGAGATCGCTTGCCTTTGTCGACAATGCCTTGGAAAGCTGCTCGAGCTCTTCGAAATCAGGGACTGTCACTGCTGGTAAGCTTATTTTGTTTGATTCGAACTCGAGGGCATCGTCAAATTGGGTTAGTAACCATGAAGCCTTGCTGAACAAGGCCTCTGAGATCGGTGCTGGAGTTTTCGGAACGGTTTATAAGGTTTCACTGGGAGATGAAGGAGGAAGAGATGTAGCTATCAAGAAGCTTGTGAAATCAAACATGATTCAAAATCCAGAAGATTTCGACCGGGAAATCCGAATCTTGGGGAAGGTTAAACACCCTAATTTGATCAGCTTAAAGGGTTACTACTGGACTGCTCAAACTCAGCTGCTGGTAATGGAGTATGCTAGCAATGGAAGTCTTCAAACTCAACTCCATGGAAGGCTTCCTTCAGCTCCACCACTGTCTTGGGATAACAGGTTCAAGATTGTGCTTGGGACGGCCAAAGGACTAGCACATTTACACCACTCATTTCGCCCGCCAATCGTTCATTACGATCTGAAGCCAACTAACATTCTGCTGGACGAAAACTTCAACCCGAAGATCTCCGATTACGGGCTCGCAAGACTGCTAACAAAGCTTGACAAGCACGTGGTGAACAACAGATTCCAAAGTGCATTGGGGTACGTCGCACCAGAACTGGCATGCCAGAGCATAAGGGTGAACGAGAAATGTGACGTACACGGGTTCGGGGTGATGATTCTGGAGATCGTGACGGGACGAAGGCCGGTGGAGTATGGAGAAGACAATGTGGTTATATTGACAGATCATGTGAGGTATTTGCTTGAGAGAGGGAATGTGTTGGATTGTGTTGATCAAAGCATGACTCAATATTCAGAAGATGAAGTAGTGCCCATTCTCAAACTGGCTTTGGTTTGCACTTCTCAAATTCCTTCAAGTAGGCCTTCCATGGCTGAAGTTGTGCAGATTCTCCAAGTCATCAAGGCTCCACTTCCACAAAGAATACGAGGATTTTGA 3039 44.75 MAFLCFLALSLLGSMTILLQNCIAFNVVSPQLNDDILGLIVFKSDLHDPSSFLSSWNEDDDSPCSWEFVKCNPINGRVSEVSIDGLGLSGRIGRGLEKLQHLKVLSLSGNNFTGNLSPQLSLPPSLDRVNFSRNSLSGRIPTSLISMSSIRFLDFSDNLLSGPLPDEMFLNCSSLHFLSLASNMLQGPVPNTLPTRCLYLNTLNLSANQFSGSLNFAPGVWSLTRLRTLDLSNNAFSGYLPQGVSAIHNLKELKLQNNQFTGPLPADLGLCIHLVTLDVSRNRLTGPLPDSMRLLTSLTFFNIGYNTFSGELPQWIGNMTSLEYLEFSSNGFTGSLPLAMGGLRSVKYMSFSNNKLSGNIPETLMECSELSVIKLEGNNLNGRVPEGLFELGLEEMVLSQNELIGSIPVGSSRLYEKLTRMDLSRNRLEGNFPAEMGLYRNLRYLNLSWNNFKTKIPPEMGLFQNLNVLDIRSSDLYGSIPGELCDSGSLGILQLDGNSLIGPIPDEIGNCLSLYLLSLSHNNLSGAIPKSISKLSKLEILRLESNQLSGEIPQELGILQNLLAVNISYNMLTGRLPVGGIFPSLDQSALQGNLGLCSPLLKGPCKMNVPKPLVLDPNAYPNQMGGQSSRNNPSQYSNPSPHHVFFSVSAIIAISAAILIALGVLVITLLNVSARRRSLAFVDNALESCSSSSKSGTVTAGKLILFDSNSRASSNWVSNHEALLNKASEIGAGVFGTVYKVSLGDEGGRDVAIKKLVKSNMIQNPEDFDREIRILGKVKHPNLISLKGYYWTAQTQLLVMEYASNGSLQTQLHGRLPSAPPLSWDNRFKIVLGTAKGLAHLHHSFRPPIVHYDLKPTNILLDENFNPKISDYGLARLLTKLDKHVVNNRFQSALGYVAPELACQSIRVNEKCDVHGFGVMILEIVTGRRPVEYGEDNVVILTDHVRYLLERGNVLDCVDQSMTQYSEDEVVPILKLALVCTSQIPSSRPSMAEVVQILQVIKAPLPQRIRGF 1012
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32238769 32243750 - ClCG07G015750.1 Cla07g01500 277488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01500 1012 Gene3D Phosphorylase Kinase; domain 1 709 802 - -
Cla07g01500 1012 Pfam Leucine Rich Repeat 441 459 IPR001611 GO:0005515
Cla07g01500 1012 CDD STKc_IRAK 730 999 - -
Cla07g01500 1012 ProSitePatterns Protein kinases ATP-binding region signature. 730 755 IPR017441 GO:0005524
Cla07g01500 1012 ProSiteProfiles Leucine-rich repeat profile. 441 463 IPR001611 GO:0005515
Cla07g01500 1012 SMART serkin_6 724 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01500 1012 SUPERFAMILY L domain-like 49 385 - -
Cla07g01500 1012 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 14 1010 - -
Cla07g01500 1012 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Cla07g01500 1012 ProSiteProfiles Protein kinase domain profile. 724 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01500 1012 PANTHER BNAA09G02190D PROTEIN 14 1010 - -
Cla07g01500 1012 SUPERFAMILY Protein kinase-like (PK-like) 727 1002 IPR011009 -
Cla07g01500 1012 SMART LRR_typ_2 147 171 IPR003591 -
Cla07g01500 1012 SMART LRR_typ_2 99 123 IPR003591 -
Cla07g01500 1012 SMART LRR_typ_2 247 271 IPR003591 -
Cla07g01500 1012 SMART LRR_typ_2 439 463 IPR003591 -
Cla07g01500 1012 SMART LRR_typ_2 535 559 IPR003591 -
Cla07g01500 1012 SMART LRR_typ_2 223 246 IPR003591 -
Cla07g01500 1012 Gene3D Ribonuclease Inhibitor 33 196 IPR032675 -
Cla07g01500 1012 Gene3D Ribonuclease Inhibitor 292 390 IPR032675 -
Cla07g01500 1012 Gene3D Ribonuclease Inhibitor 197 291 IPR032675 -
Cla07g01500 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Cla07g01500 1012 Pfam Protein kinase domain 726 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla07g01500 1012 Pfam Leucine Rich repeat 99 114 IPR001611 GO:0005515
Cla07g01500 1012 Gene3D Transferase(Phosphotransferase) domain 1 803 1007 - -
Cla07g01500 1012 Gene3D Ribonuclease Inhibitor 391 611 IPR032675 -
Cla07g01500 1012 SUPERFAMILY L domain-like 312 587 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01500 Cla-Chr7:32238769 Cla11g00542 Cla-Chr11:6152622 0 dispersed
Cla07g01500 Cla-Chr7:32238769 Cla10g02150 Cla-Chr10:37115218 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80709 PF00069 Pkinase 2.30E-44 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01500 - - csv:101217545 1807.34