Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01518 ATGAAAATTCTCAGTGGGCTCTCAAAAAGCTTTCATCTCCACTCCTCAAAAACGATCTGCCAAGTGAGCAAAAACACCCCTCCTCAGTCCTCACTTTGCATTCCCATTCCTTCTCTCCGCGTTTTACTTTTCTCTCTCTCTCTCTCTCTCCGATTCTCAGACGTTACAAAAAGCTTAAAACCCACGAACCCAGAAAGCCATAACCACGATTTTTTAGCCAAACCCATGATTATGGCTCTTCCCATTTCCAGATTACTCTCTCTCTTTCCCCTTCTACCCATTTTTCTTGCCTTCTCTACCTTTCTTGTTTCAACAGAAGCATATGATCCACTTGATCCAAATGGAAACATTACTATCAAATGGGATATTATGAGCTGGACTGCTGATGGATATGTTGGTGTTGTTACCCTGTATAATTTCCAACAATACCGGCATATTCAAACACCGGGATGGTCTCTCCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAACATGTTGGGAGGCCAAGCAACAGAGCAAGGTGATTGTTCTAGATTTAAAGGGAACATCCCCCATTGCTGCAAGAGGGATCCAACAGTTGTTGACCTATTGCCTGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAAAGGTGGAGTTCTTAACTCCTGGGTGCAAGATCCAGCTACTGCAGTGAGCTCATTTCAGCTCACCGTTGGTTCAGCCGGAACCTCGAATAAAACTGTCCGACTGCCAAAGAACTTTACCTTAAAAGCACCTGGACCTGGTTATACCTGTGGACCGGCCAAAATTGTTAAACCGAGCAAATTCGTTTCCCCCGACAAACGGAGAGTTACACAGGCATTGATGACATGGAATGTTACATGCACATATTCACAATTTCTGGCCCAAAAAACTCCTACTTGCTGTGTCTCGCTGTCGTCATTTTACAACGACACAATTGTTTCTTGCCCGAAGTGCTCCTGTGGCTGCCAAGGCAACTTGAATGCACTCCAAAGTTGTGTGGAGCCAAATTCTCCGTATTTAGCCTCTGTTGTTAGCAGTGCTAGTTCTAGCAAGAGCAATTTGACACCATTGGTTCAGTGTACTGGCCATATGTGCCCGATTCGAGTTCACTGGCATGTGAAGCTTAACTATAAGGAGTATTGGAGGGTGAAGATCACAATTACAAACTTCAATTACATGATGAATTATACAAATTGGAACTTAGTTGTTCAACATCCGAACTTCGACAATCTAACACAGATTTTCAGCTTCAACTACCAGTCAATCAATCCGTATGGAACAATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAACGATTTGCTCATGCAAGCAGGTCCTCTTGGGAATGTGCAGACAGAGCTACTATTCCGGAAGGATCAATCGACTTTCACATTTGACAAAGGCTGGGCTTTTCCTCGGAGGATCTATTTTAATGGCGACAATTGTGTTATGCCACCTCCGGAAGCCTATCCCTACTTACCAAACACAGGTTCTAAGCAAGATGTCTCGATGTTTACTATGCTATTGCTGATTTCCTTGACTCTCTTGTCTTTCCACCATTCGTTTGCATAA 1593 43.5 MKILSGLSKSFHLHSSKTICQVSKNTPPQSSLCIPIPSLRVLLFSLSLSLRFSDVTKSLKPTNPESHNHDFLAKPMIMALPISRLLSLFPLLPIFLAFSTFLVSTEAYDPLDPNGNITIKWDIMSWTADGYVGVVTLYNFQQYRHIQTPGWSLQWKWAKKEVIWNMLGGQATEQGDCSRFKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPATAVSSFQLTVGSAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFVSPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCQGNLNALQSCVEPNSPYLASVVSSASSSKSNLTPLVQCTGHMCPIRVHWHVKLNYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDNLTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPEAYPYLPNTGSKQDVSMFTMLLLISLTLLSFHHSFA 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32368428 32371536 + ClCG07G015950.2 Cla07g01518 277506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01518 530 Pfam COBRA-like protein 131 294 IPR006918 GO:0010215|GO:0031225
Cla07g01518 530 PANTHER PROTEIN COBRA 84 528 IPR006918 GO:0010215|GO:0031225
Cla07g01518 530 PIRSF COBRA 80 530 IPR006918 GO:0010215|GO:0031225
Cla07g01518 530 PANTHER COBRA-LIKE PROTEIN 84 528 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla06g01531 Cla-Chr6:28866176 Cla07g01518 Cla-Chr7:32368428 0 dispersed
Cla07g01518 Cla-Chr7:32368428 Cla10g00527 Cla-Chr10:6977870 6.01E-29 dispersed
Cla07g01518 Cla-Chr7:32368428 Cla07g01519 Cla-Chr7:32372088 0 tandem
Cla02g00449 Cla-Chr2:4396275 Cla07g01518 Cla-Chr7:32368428 2.43E-136 transposed
Cla05g01018 Cla-Chr5:10359437 Cla07g01518 Cla-Chr7:32368428 2.27E-165 transposed
Cla04g01143 Cla-Chr4:26624996 Cla07g01518 Cla-Chr7:32368428 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01518 - - csv:101207224 868.611