Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01519 ATGAGGTTGTTCATCTCAGCTGTCTTCCTTTTTGTCTTATTTTCTCATGGAGCTGCATATGATCCGTTGGATCCGAATGGGAACATTACGATCAAATGGGACATCATGTCTTGGACGCCTGATGGCTATGTGGCGGTAGTTACGTTGAACAACTTCCAAATGTACCGGCATATAATGAGCCCTGGTTGGACGATGGGGTGGACTTGGGCAAAAAAGGAAGTGATATGGTCGATGGTGGGGTCGCAGACGACGGAGCAAGGCGACTGCTCCAAGTTCAAAGGAAACATTCCTCACTGCTGCAAGAAAAACCCCACCGTTGTGGATTTGATGCCTGGAGTTCCTTACAACCAACAATTTACAAACTGCTGCAAAGGTGGGGTTGTGCCTGCTTGGGGACAAGACCCTCAAGCTGCTGTTTCAGCCTTTCAGCTTAGTGTTGGCCAAGCAGGTACTTCAAACAAGACTGTCAAGCTCCCCAAGAACTTCACTTTGCTTGGTCCCGGCCCCGGATACACTTGTGGACCTGCAAAGGTTGTGCCTTCCACCACTTTCCTCACACCTGACCGCCGCCGCAAAACTCAAGCTCTGATGACTTGGAACGTGACCTGCACTTACTCTCAGTTTCTAGCAAGAAAGAATCCTAATTGTTGTGTTTCTTTCTCGTCTTTCTACAACGATACGATCACATCTTGTCCGTCTTGCGCCTGTGGTTGCCAAAACAAGAACAACTGTGTCCAGAGTGATTCTAAGATTCTTAAGCTGGTTGGAATCAATACACCAAGGAAAGACAATGCCCCGTTGCTGCATTGCACACATCACATGTGCCCCGTTCGAGTTCACTGGCACGTAAAGCAAAATTACAAAGAATATTGGCGGGTGAAGATCGCCATCACAAACTTCAACTACCGAATGAACTATTCGCTTTGGTCTCTCGTTGTCCAGCACCCAAATCTGAACAATGTAACCCAAGTTTTCAGCTTCGACTACAAACCACTTGTTCCCTATGGATCAATCAATGACACAGGAATGTTTTACGGGATGAAGTTCTATAACGACCTTCTCATGGAAGCGGGGCCATTTGGGAATGTACAATCAGAGGTGTTGCTGCAAAAGGACCAGAACACCTTCACTTTCAAGCAAGGATGGGCATTCCCTCGAAAAGTTTACTTCAATGGTGACGAGTGCATGCTTCCACCACCCGACACATACCCATTCCTGCCAAACACTGCCCGGGAAAGGCCAGTTGCCGTCTCATCTTCAATTGCTTTGCTGCTGCTCTTCATGCTGTTAGCTATTTGCTGA 1302 47.47 MRLFISAVFLFVLFSHGAAYDPLDPNGNITIKWDIMSWTPDGYVAVVTLNNFQMYRHIMSPGWTMGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNIPHCCKKNPTVVDLMPGVPYNQQFTNCCKGGVVPAWGQDPQAAVSAFQLSVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPNCCVSFSSFYNDTITSCPSCACGCQNKNNCVQSDSKILKLVGINTPRKDNAPLLHCTHHMCPVRVHWHVKQNYKEYWRVKIAITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFDYKPLVPYGSINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLLQKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNTARERPVAVSSSIALLLLFMLLAIC 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32372088 32373833 - ClCG07G015960.1 Cla07g01519 277507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01519 433 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Cla07g01519 433 PANTHER PROTEIN COBRA 7 428 IPR006918 GO:0010215|GO:0031225
Cla07g01519 433 PIRSF COBRA 1 433 IPR006918 GO:0010215|GO:0031225
Cla07g01519 433 PANTHER COBRA-LIKE PROTEIN 7 428 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g01143 Cla-Chr4:26624996 Cla07g01519 Cla-Chr7:32372088 0 dispersed
Cla06g01530 Cla-Chr6:28863541 Cla07g01519 Cla-Chr7:32372088 0 dispersed
Cla07g01519 Cla-Chr7:32372088 Cla10g00527 Cla-Chr10:6977870 7.58E-29 dispersed
Cla07g01518 Cla-Chr7:32368428 Cla07g01519 Cla-Chr7:32372088 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01519 - - csv:101217724 873.618