Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01545 ATGTCGCCTGTTGATTCTTCACGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCTGAACGATATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTAGATGTCGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAATGAGGACCATGTTGCAATTATCAAGGATTACCGTGGCAAAATCGAGACTGAACTGAGCAAGATCTGTGATGGAATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCAAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAAAGAAAAGAAGCAGCTGAGAGCACATTGTTAGCCTACAAGTCTGCTCAGGATATTGCTCTTGCCGAATTGGCTCCTACTCATCCAATTAGGCTAGGTCTCGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGATACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATTGGGGACGAAGCTGGCGATGAGATTAAGGAAGCATCAAAACGTGAATCAGGGGAGGGACAGTAG 786 45.55 MSPVDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRESGEGQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32645947 32647652 + ClCG07G016270.1 Cla07g01545 277533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01545 261 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
Cla07g01545 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cla07g01545 261 PIRSF 14-3-3 3 250 IPR000308 -
Cla07g01545 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cla07g01545 261 Coils Coil 14 34 - -
Cla07g01545 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cla07g01545 261 SMART 1433_4 8 251 IPR023410 -
Cla07g01545 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Cla07g01545 261 Gene3D - 2 251 IPR036815 -
Cla07g01545 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cla07g01545 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cla07g01545 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cla07g01545 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cla07g01545 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cla07g01545 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cla07g01545 261 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 257 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01545 Cla-Chr7:32645947 Cla11g01392 Cla-Chr11:27459767 1.78E-158 dispersed
Cla07g01545 Cla-Chr7:32645947 Cla08g01123 Cla-Chr8:23987753 6.38E-162 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01545 K06630 - csv:101222068 501.901