Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01573 ATGGGTGCTCAGAGAAAGGGAGCATCGCGGGTCTCCGAGGACCCCGAGGAGCTGGCACGAGTTTCGTTGCAGGCTGTTCTCCTTGCCGATAGCTTTACTACTAAGTTTCGCCCCATTACGCTTGAACGCCCCAAGGTATTACTGCCGCTCGTAAATGTGCCGATGATTAATTATACCTTATCTTGGCTCGAATCGGCTGGTGTTGAAGAGGTGTTTGTATTTTGCTGTGCTAACTCGAAGCAAGTAATTGATTATTTGGAGAACTCTGAGTGGGTATCCCTACCAGACTTTGCAGTCACAACTATAGAGTCGCACAACTCCATTAGTGCTGGAGATGCCTTGCGTTTGATCTACGAAAGAAATGTGATACATGGTGATTTTGTACTTATCACTGGAGACACCATAAGCAACATGTCACTTACGCAAGCTCTTCAAGAACACAAAGAGAGAAAGAAGAAAGATAGTAATGCCGTAATGACTATGGTTGTCAAACGGTCAAAGCCTTCTCCTATCACTCACCAATCTCGGCTTGGCACCGACGAACTATTTATGGCAATTGATCACAATACTAAGCAACTCTTGTACTATGAGGATAAGGTTGACCATTCAAAAGGAATTATACATCTAGACAAGTCATTGCTAATGGATAATCCTTCCATATCACTTCATAACGACATGCAGCTAGCTACAATAGGAATTATTGTCCATCTAGCTTCTACCTTTGTATATCTGTTAGTAATTGATAGATGTAGGGAGTGGCATCGTGTCAAAAGACAAACTAGACTAAATCATATTCATGATATGCAGGATTGTTACATAGACATATGCTCCCCAGAAGTACTCAGTTTGTTTACTGACAATTTTGACTACCAACATCTACGTCGTCATTTTGTGAAGGGCTTGCTCTTAGATGATATCATGGGTTACAAGATTTATACACATGAAATTTGCTCAAGCTATGCAGCTAGAATCGATAATTATCGAAGCTATGACACCGTTAGTAAGGACATAATACAAAGGTGGACATATCCACTGGTACCTGATGTTAAATTCTTTGGGAATTCTGCTTATAAACTTGAAAGGCAGGGAATGTATCGAGCATCAGCTCACGAGCTTGTATTTTTCTTCTTTGTTGCGTTGCTTTGTGATGCTTCTGATATACTCTTTTGCAATAAATGGTCAATTTTCATGTTGGTGACATATGGTTTGCTATATTACTCTCAATTTGGTCAATTGCTTTTCTGTAACTTCTTTAGAATTGCACGCTCTGCACAGGTTGGTCCGTTTACTGTTATTGGAGATAACAGCAAAATTGGTGGTAACACCAAAATTACGAATTCAATTATTGGGCAAGGGTGTAATATTGGATCAAATGTTACAATTGAAGGCTCTTACATATGGGACAATGTGACCATTGAAGATGGCTGTAAACTCAGTCATGCTATCGTATGTGATGGAGTTGTCATAAAGTCAGGAGCAGAACTGGAACCTGGTGTAATTTTGTCTTTCAAGGTTGTTGTGGGGGATCAATTTACCGTTCCATCATATTCAAAGGTATCTTTGTTTCAGCAGCCAACCAATCAAGATAGTGATGAGGAGCTGGAATATGCAGATAATAGCAGTGGCATTGTAGAATTTGCAGATACAACAGACAAGTCAAATAGTGCACTGATGTCCAAATCGCTGGAAATGCAAGGCTGGCCTGCATCTGAGGGGTTAAAAGTGCTGAGATCATCCGAAATGGCATGTATTTTTGGACATTTAGATAGAATATTGTCGTTAACTATATTAAGTATCAGAATAGAAATTTTACGGGCAATTGACTCTGACATTCACTATTGTTATTCTCAGCTAGGCAAGGGAGGTCTAGGACATGTTTGGTCAATTTGTGAAGGAAGTGTTGAAGAAGAATGGAGGCACTCAGTTGCACCCATTCCTGCCGATAAACTTGAGAAGGTTCTGCATAAAGCAACAGATGATGAGCTGGAGTCAACTCAAGATGCTAATATTTTACCACCTTCAGGGGAGTTGAAGTCCGACTCATACGTCTCAGATGGTGATGATAATGAAAGCTCTAGAGATGACTCCTTCCACTTTGAGAAAGAGGTTGAAGCAACATTTCTGAGGGCTGTGCATGAAAATATTGAAGTAGCCAATGTAATTTTGGAAGTGAATTCATTGCGGTATGCTATTTTGCATTTTGCGGCGCAAAAGAGATTAATATTCTTTAGAAGAGAAATAAAAGTGAGATTTCCTGCCGTGAACTTTTGGATTGTGGATGCTAAAGTGACATTCTGGAGGTTGTCATATAATAAGGTAGCTTCAGATTGTGCAGGAGCAATATTTTATTCTCTGATGAACTTTGCCTTAGATGCTCCACATGGTTCATCTAGTGAACTACTGCAAAATACTACAAATATAATTACGAAATGGAAAAAACTTTTGAAGTACTACCTAACCGACTTGGATGAAGAGATTGAAGTGATATTAAAATTTGAAGAGATATGCCTGGAATCTGCCAAGGAATTCACTCCACATTTTACTAAGATTTTGTGGCATCTATATGACCAAGAAATCATTCAAGAAGAGGCTATTCTGAAGTGGGATGCTGAGAAAAAGGAAGCGGATGATTCAGATAAGCTTTTCGTGAAGCAGGCCGAAAAATTCATTGAATGGTTAAAAGTTGCACCAGAGGAAGAGGAAGAGGAAGAAGAGGAAGAAGAGGATGAATAG 2733 39.66 MGAQRKGASRVSEDPEELARVSLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYTLSWLESAGVEEVFVFCCANSKQVIDYLENSEWVSLPDFAVTTIESHNSISAGDALRLIYERNVIHGDFVLITGDTISNMSLTQALQEHKERKKKDSNAVMTMVVKRSKPSPITHQSRLGTDELFMAIDHNTKQLLYYEDKVDHSKGIIHLDKSLLMDNPSISLHNDMQLATIGIIVHLASTFVYLLVIDRCREWHRVKRQTRLNHIHDMQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIYTHEICSSYAARIDNYRSYDTVSKDIIQRWTYPLVPDVKFFGNSAYKLERQGMYRASAHELVFFFFVALLCDASDILFCNKWSIFMLVTYGLLYYSQFGQLLFCNFFRIARSAQVGPFTVIGDNSKIGGNTKITNSIIGQGCNIGSNVTIEGSYIWDNVTIEDGCKLSHAIVCDGVVIKSGAELEPGVILSFKVVVGDQFTVPSYSKVSLFQQPTNQDSDEELEYADNSSGIVEFADTTDKSNSALMSKSLEMQGWPASEGLKVLRSSEMACIFGHLDRILSLTILSIRIEILRAIDSDIHYCYSQLGKGGLGHVWSICEGSVEEEWRHSVAPIPADKLEKVLHKATDDELESTQDANILPPSGELKSDSYVSDGDDNESSRDDSFHFEKEVEATFLRAVHENIEVANVILEVNSLRYAILHFAAQKRLIFFRREIKVRFPAVNFWIVDAKVTFWRLSYNKVASDCAGAIFYSLMNFALDAPHGSSSELLQNTTNIITKWKKLLKYYLTDLDEEIEVILKFEEICLESAKEFTPHFTKILWHLYDQEIIQEEAILKWDAEKKEADDSDKLFVKQAEKFIEWLKVAPEEEEEEEEEEEDE 910
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32927625 32941763 - ClCG07G016490.2 Cla07g01573 277561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01573 910 Gene3D Hexapeptide repeat proteins 415 524 - -
Cla07g01573 910 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 12 345 IPR029044 -
Cla07g01573 910 ProSiteProfiles W2 domain profile. 693 903 IPR003307 GO:0005515
Cla07g01573 910 CDD eIF-2B_epsilon_N 23 281 IPR035543 -
Cla07g01573 910 MobiDBLite consensus disorder prediction 681 695 - -
Cla07g01573 910 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 730 - -
Cla07g01573 910 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 767 904 - -
Cla07g01573 910 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058|GO:0016779
Cla07g01573 910 Gene3D - 687 909 - -
Cla07g01573 910 MobiDBLite consensus disorder prediction 660 695 - -
Cla07g01573 910 Pfam eIF4-gamma/eIF5/eIF2-epsilon 824 903 IPR003307 GO:0005515
Cla07g01573 910 SUPERFAMILY ARM repeat 760 894 IPR016024 -
Cla07g01573 910 CDD LbH_eIF2B_epsilon 431 509 - -
Cla07g01573 910 SMART 542_3 812 899 IPR003307 GO:0005515
Cla07g01573 910 CDD W2_eIF2B_epsilon 694 894 IPR044123 GO:0005085|GO:0031369
Cla07g01573 910 SUPERFAMILY Nucleotide-diphospho-sugar transferases 23 486 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01372 Cla-Chr3:29178201 Cla07g01573 Cla-Chr7:32927625 8.37E-11 dispersed
Cla07g01573 Cla-Chr7:32927625 Cla11g00634 Cla-Chr11:7267697 4.20E-09 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01573 K03240 - csv:101217025 1263.83