Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01592 ATGAAATTTTCAGTTTCTCCCATTTTCAAATCCCCCGCCATTATTTCCCCCAGATTCTTCTTCTCCACCGCCATGTCCACTTCCGATCACTCTCCCCCTGCCTTCGACCGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGCACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAATGATTTGAAGAATCTAGATCCATTTCTTATGCTCGATGATTTCTCTGGTAATCTCGATCGGAATCTGATTTCAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTCCTTCCTTTCCGTTGAATTTTCGCTGTTCAATAACAGAACTGCTCTGCGAATTCAACTATTATTATTGTTTTGAGACAGTGACGTACATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCAGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAGCTTTGGATCAATCTTGCATCCCATGACAAAATGATGGAGCCAAGGTATCAAGAGATCTCAAACGACAACATTCCAAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGAGAGTCTATGGGAGTTCATTCTCCAATCTACACTAGAACTCCAACTATGTACCTTGACTTTACTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATTCCAGACTCGTGGACGTCTTTCGTGTACATAATAGACGGGGAAGGAGTGTTCGGGTCGCCGAACTCATCGCGGGTGGCGGCTCACCATGTTCTAGTATTGGGAGGTGGAGATGGGGTAAGTGTGTGGAACAGATCTTCAAAACCACTGAGGTTTGTTTTGATTGCAGGGAAGCCCTTGAATGAGCCAATTGTTCAATATGGACCATTTGTTATGAACTCACAATCTGAAATTGACAAAGCAATTGAGGACTATCACTATTCCAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA 1053 45.68 MKFSVSPIFKSPAIISPRFFFSTAMSTSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSGNLDRNLISVRRLDSPIILTEVPSFPLNFRCSITELLCEFNYYYCFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISNDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPRAQVHQSIPDSWTSFVYIIDGEGVFGSPNSSRVAAHHVLVLGGGDGVSVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIDKAIEDYHYSKNGFEMAKYWRSQ 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33219779 33222059 + ClCG07G016710.2 Cla07g01592 277580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01592 350 PIRSF Pirin 37 86 IPR012093 -
Cla07g01592 350 PIRSF Pirin 124 348 IPR012093 -
Cla07g01592 350 PANTHER PIRIN-RELATED 124 350 IPR012093 -
Cla07g01592 350 PANTHER PIRIN-RELATED 28 80 IPR012093 -
Cla07g01592 350 PANTHER PIRIN-LIKE PROTEIN 124 350 - -
Cla07g01592 350 Gene3D Jelly Rolls 204 309 IPR014710 -
Cla07g01592 350 Pfam Pirin 126 182 IPR003829 -
Cla07g01592 350 PANTHER PIRIN-LIKE PROTEIN 28 80 - -
Cla07g01592 350 SUPERFAMILY RmlC-like cupins 126 348 IPR011051 -
Cla07g01592 350 Gene3D Jelly Rolls 126 335 IPR014710 -
Cla07g01592 350 Pfam Pirin C-terminal cupin domain 235 339 IPR008778 -
Cla07g01592 350 CDD cupin_pirin_C 232 308 - -
Cla07g01592 350 CDD cupin_pirin_N 56 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01592 Cla-Chr7:33219779 Cla09g02042 Cla-Chr9:38008530 1.02E-122 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01592 K06911 - csv:101205861 556.984