Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01592 | ATGAAATTTTCAGTTTCTCCCATTTTCAAATCCCCCGCCATTATTTCCCCCAGATTCTTCTTCTCCACCGCCATGTCCACTTCCGATCACTCTCCCCCTGCCTTCGACCGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGCACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAATGATTTGAAGAATCTAGATCCATTTCTTATGCTCGATGATTTCTCTGGTAATCTCGATCGGAATCTGATTTCAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTCCTTCCTTTCCGTTGAATTTTCGCTGTTCAATAACAGAACTGCTCTGCGAATTCAACTATTATTATTGTTTTGAGACAGTGACGTACATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCAGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAGCTTTGGATCAATCTTGCATCCCATGACAAAATGATGGAGCCAAGGTATCAAGAGATCTCAAACGACAACATTCCAAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGAGAGTCTATGGGAGTTCATTCTCCAATCTACACTAGAACTCCAACTATGTACCTTGACTTTACTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATTCCAGACTCGTGGACGTCTTTCGTGTACATAATAGACGGGGAAGGAGTGTTCGGGTCGCCGAACTCATCGCGGGTGGCGGCTCACCATGTTCTAGTATTGGGAGGTGGAGATGGGGTAAGTGTGTGGAACAGATCTTCAAAACCACTGAGGTTTGTTTTGATTGCAGGGAAGCCCTTGAATGAGCCAATTGTTCAATATGGACCATTTGTTATGAACTCACAATCTGAAATTGACAAAGCAATTGAGGACTATCACTATTCCAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA | 1053 | 45.68 | MKFSVSPIFKSPAIISPRFFFSTAMSTSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSGNLDRNLISVRRLDSPIILTEVPSFPLNFRCSITELLCEFNYYYCFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISNDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPRAQVHQSIPDSWTSFVYIIDGEGVFGSPNSSRVAAHHVLVLGGGDGVSVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIDKAIEDYHYSKNGFEMAKYWRSQ | 350 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 33219779 | 33222059 | + | ClCG07G016710.2 | Cla07g01592 | 277580 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01592 | 350 | PIRSF | Pirin | 37 | 86 | IPR012093 | - | |
Cla07g01592 | 350 | PIRSF | Pirin | 124 | 348 | IPR012093 | - | |
Cla07g01592 | 350 | PANTHER | PIRIN-RELATED | 124 | 350 | IPR012093 | - | |
Cla07g01592 | 350 | PANTHER | PIRIN-RELATED | 28 | 80 | IPR012093 | - | |
Cla07g01592 | 350 | PANTHER | PIRIN-LIKE PROTEIN | 124 | 350 | - | - | |
Cla07g01592 | 350 | Gene3D | Jelly Rolls | 204 | 309 | IPR014710 | - | |
Cla07g01592 | 350 | Pfam | Pirin | 126 | 182 | IPR003829 | - | |
Cla07g01592 | 350 | PANTHER | PIRIN-LIKE PROTEIN | 28 | 80 | - | - | |
Cla07g01592 | 350 | SUPERFAMILY | RmlC-like cupins | 126 | 348 | IPR011051 | - | |
Cla07g01592 | 350 | Gene3D | Jelly Rolls | 126 | 335 | IPR014710 | - | |
Cla07g01592 | 350 | Pfam | Pirin C-terminal cupin domain | 235 | 339 | IPR008778 | - | |
Cla07g01592 | 350 | CDD | cupin_pirin_C | 232 | 308 | - | - | |
Cla07g01592 | 350 | CDD | cupin_pirin_N | 56 | 184 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01592 | Cla-Chr7:33219779 | Cla09g02042 | Cla-Chr9:38008530 | 1.02E-122 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01592 | K06911 | - | csv:101205861 | 556.984 |