Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla07g01603 | ATGGCTGATTCCCGAGCTCTTCCTCTTCGTTGCGGAGCAGGTATCGTCAAAAGTATCCGCTTAGAGAACTTCATGTGTCACAGCAACTTGTATATTGAATTTGGCGAGTGGCTCAATTTCATTACTGGGCAGAACGGAAGTGGTAAGAGCGCTATACTGACTGCTTTATGTGTGGCATTCGGCTGTCGAGCTAAAGGAACCCAAAGGGCATCGACGTTGAAGGATTTTATTAAAACTGGTTGCAGTCATGCTGTCATCAATGTTGTATTGCAAAATACTGGGGAGGATGCTTTCAAGCATGGAATATATGGTGATGTTATAATCATAGAAAGAAGGATATCCGAAGCCACCAGTGCTATTGTTTTGAAGGATTCTCATGGGAAAAAAGTTGCCAGTCGGAGGGATGAACTACGAGAGCTAGTAGAACATTTTAATATAGATGTTGAGAATCCATGTGTAATAATGAGTCAGGACAAAAGTAGAGAGTTCCTGCATTCTGGGAACGACAAAGACAAATTTAAGTTCTTCTTCAAGGCAACTCTTCTTCAGCAAGTGGACGATTTACTGAAAAACATTTTTGATCAATTGAGATCTGCAAATGCGCTTGTTGATGACTTGGAGTCTACCATACGACCTGTAGAGAAGGAACTAAATGAGCTGCGAGGAAAAATTAAAAACATGGAGCATGTAGAAGAAATCTCTCAACAAGTCCAGCAATTAAAGAAAAAGCTTGCTTGGTCATGGGTATATGATGTAGACAAGCAGCTTCAGGAGCAAAGTGCAAAAATAGGAAAGCTCCAAGATCGCATTCCTATTTGTCGAGCAAAAATCGATCATCAACTGGGTCTGGCAGAAAAATTAAGAGAACGCTTTATTGAGAAAAAGACTCAAATTGCAAGCATGATGGAGAGAACTTCAGAAGTGAGAAGAATGAAGGATGAACTGCAGGGAACTCTTTCCTTGGCAACAAGAGAGAAGCTTGGACTTGAAGAGGAGCATGGCCGTAAAATAAACTACATCCAAAAGATGGCAAAGCGTGTTAGGCTGCTTGAGCAACAAGTTCAAGATATTCATGAGCAGCACATAAGAAATACACAGGCCGAAGAATCTGAAATTGAGGAAAAGTTGAAGGAACTCGAATCGGAGACTGAAGATGCTAAGTCAACAGTCATGAGGTTGAAAGAGGAGGAAAATGCCTTAATGGAAAGTCTATACAGTGGGAGAAATGAAATAAAAAAGATTGCTGAAGAGATTGAAAGTTATGAGAAAAAGCATTATGAATTTTCTCACTCAATTCGAGAGCTAAGGCAGCATCAAACCAACAAGGTCACAGCTTTTGGAGGTGATAGAGTCATTCAATTATTACGTGCAATTGAGAGACAACATCAAAGATTCAAGAAACCTCCCATTGGTCCAATTGGTTCCCATCTGAATTTGGTCAATGGTGACATGTGGGCTCCTGCTGTTGAAAGTGCCATTGGAAGGTTGCTCAATGCTTTCATTGTGACGGATCACCAAGATTCTCTTCTTTTGAGAAGATGTGCAAATGAAGCTAATTATAGGCAACTCCCAATTATCATCTATGACTTTTCAAGACCGGTGTTAAATATTCCAGATCACATGCTTCCTCAAACAAAGCACCCTACAACCCTTTCAGTCATTCATTCTGAAAACCACACTGTCATCAATGTTTTGATAGATAAGGGTGATGCTGAGAGGCAAGTGCTTGTTAAAGATTATGATGTGGGTAAATCAGTCGCATTTGACCAACGTATATCAAATCTCAAGGAGGTCTTTACATTAGATGGATACAAAATATATGCATTATCTTCCAGTTCCAAAAAGGAGGAGAATCTCTTTTACCAGCTGAATCCCATTTTGCCTAAAAATCTCTTCAGGTTTTCTCGAGGTTCCGTCCAGACAATTCTTCCCCCAGTTAGAAGACCCAGAAGTGGCAGACTTTGTAGTTCCTTTGAAGACCAAATTAAAAGTCTTGAAAGAGATGCATTTAATGTAAAGCAAGAAGCTGAACAATGTAGGAAGAGGAAGAGAGTTTCAGAAGAACAACTCCGGGATCTTGAAGACAACCTAAGCAATGCAAAGAGGAAGTGTCGGAGTGCAGAACGGTTTTTAATGTCCAAAAATTTGGAGCTGCAAGATTTACGGAAGTCACAAGTTGCTGAGACTAGTTCATTGCCTTCATCAAATGTGGACGAGCTTCATCAAGAAATTTCTAAAATCGAAGAGGAGATACAAGAGAATAATTTGCTTTTGGAAAAGTTTAAAATTAGGATGAAAGAAGCGGAAGCCAAGGCAAAAGATCTTAAAGTATCATTTGAGAATCTCTGTGAGTCAGCGAAAGGAGAAATTGATGCATTTGAAGAAGCTGAGAGAGATATGTTGCAGATTGAACGAGAGCTGCATTCTGCAGAAAAGGAGAAGGATCATTATGAAGGTATTATGACTAACAAGGTACTTTTTGATATTAAAGAGGCAGAGAGACAATATCAGGAGCTTGAGCGCCATCGTAAGGAGAGCTACAGTAAGGCTTCAATAATATGTCCTGAGAGTGAAATTGAGGCTTTGGGTGATTGGGATGGGAGCACACCTGAACAACTGAGTGCACAATTAACAAGGCTAAATCAGAGACTGAATAATGAGACTCGACGATGTTCTGAATCTTTGGAAGACTTGAGGATGATGTATGAGAAAAAGGAGCGTACAATCATAAGAAAACAACAGACTTATAAAAGTTTTAGGGAGAAGTTGGATGCTTGCCAGAAAGCTCTTGAGCTACGGTGGAATAAGTTTGAAAGGAATGCTAGTCTTTTGAAGCGCCAATTGACTTGGCAATTTAATGGCCATTTAAGAAAAAAGGGGATCAGCGGACATATAAAAGTTAATTACGAGGAAAAGACCCTCTCAGTTGAGGTGAAGATGCCCCAAGATGCATCCAGCAGTTCTGTTCGTGATACCCGTGGACTTTCAGGTGGAGAACGGTCATTTTCAACTCTATGCTTTGCATTGGCATTACACGAAATGACAGAAGCCCCATTTCGAGCAATGGATGAGTTCGATGTGTTTATGGTGAGCTACTGTCTCATTCTTGATGCAGTAAGCCGGAAAATTAGCTTAGACACTCTTGTGGATTTTGCATTGGCACAAGGCTCCCAATGGATATTTATCACACCTCATGACATCGGTATTGAGACACTTTACGTTTGGGGTTCTAACTACAGCATAGTAAAACAAGGAGAACGAATCAAGAAGCAGCAAATGGCAGCTCCTCGATCATGA | 3297 | 40.4 | MADSRALPLRCGAGIVKSIRLENFMCHSNLYIEFGEWLNFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGCSHAVINVVLQNTGEDAFKHGIYGDVIIIERRISEATSAIVLKDSHGKKVASRRDELRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVDDLLKNIFDQLRSANALVDDLESTIRPVEKELNELRGKIKNMEHVEEISQQVQQLKKKLAWSWVYDVDKQLQEQSAKIGKLQDRIPICRAKIDHQLGLAEKLRERFIEKKTQIASMMERTSEVRRMKDELQGTLSLATREKLGLEEEHGRKINYIQKMAKRVRLLEQQVQDIHEQHIRNTQAEESEIEEKLKELESETEDAKSTVMRLKEEENALMESLYSGRNEIKKIAEEIESYEKKHYEFSHSIRELRQHQTNKVTAFGGDRVIQLLRAIERQHQRFKKPPIGPIGSHLNLVNGDMWAPAVESAIGRLLNAFIVTDHQDSLLLRRCANEANYRQLPIIIYDFSRPVLNIPDHMLPQTKHPTTLSVIHSENHTVINVLIDKGDAERQVLVKDYDVGKSVAFDQRISNLKEVFTLDGYKIYALSSSSKKEENLFYQLNPILPKNLFRFSRGSVQTILPPVRRPRSGRLCSSFEDQIKSLERDAFNVKQEAEQCRKRKRVSEEQLRDLEDNLSNAKRKCRSAERFLMSKNLELQDLRKSQVAETSSLPSSNVDELHQEISKIEEEIQENNLLLEKFKIRMKEAEAKAKDLKVSFENLCESAKGEIDAFEEAERDMLQIERELHSAEKEKDHYEGIMTNKVLFDIKEAERQYQELERHRKESYSKASIICPESEIEALGDWDGSTPEQLSAQLTRLNQRLNNETRRCSESLEDLRMMYEKKERTIIRKQQTYKSFREKLDACQKALELRWNKFERNASLLKRQLTWQFNGHLRKKGISGHIKVNYEEKTLSVEVKMPQDASSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMVSYCLILDAVSRKISLDTLVDFALAQGSQWIFITPHDIGIETLYVWGSNYSIVKQGERIKKQQMAAPRS | 1098 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 33341372 | 33354410 | - | ClCG07G016820.2 | Cla07g01603 | 277591 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla07g01603 | 1098 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 15 | 294 | IPR027417 | - | |
Cla07g01603 | 1098 | Coils | Coil | 189 | 223 | - | - | |
Cla07g01603 | 1098 | Gene3D | - | 16 | 267 | IPR027417 | - | |
Cla07g01603 | 1098 | SUPERFAMILY | Smc hinge domain | 423 | 604 | IPR036277 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
Cla07g01603 | 1098 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B | 9 | 607 | IPR027132 | GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915 | |
Cla07g01603 | 1098 | Coils | Coil | 737 | 820 | - | - | |
Cla07g01603 | 1098 | Coils | Coil | 822 | 849 | - | - | |
Cla07g01603 | 1098 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6B | 634 | 1098 | IPR027132 | GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915 | |
Cla07g01603 | 1098 | Pfam | RecF/RecN/SMC N terminal domain | 16 | 1028 | IPR003395 | - | |
Cla07g01603 | 1098 | Coils | Coil | 877 | 915 | - | - | |
Cla07g01603 | 1098 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 | 9 | 607 | - | - | |
Cla07g01603 | 1098 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 17 | 1063 | IPR027417 | - | |
Cla07g01603 | 1098 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 | 634 | 1098 | - | - | |
Cla07g01603 | 1098 | Coils | Coil | 362 | 396 | - | - | |
Cla07g01603 | 1098 | Coils | Coil | 340 | 360 | - | - | |
Cla07g01603 | 1098 | CDD | ABC_SMC6_euk | 16 | 168 | - | - | |
Cla07g01603 | 1098 | Gene3D | - | 766 | 1085 | IPR027417 | - | |
Cla07g01603 | 1098 | Coils | Coil | 284 | 304 | - | - | |
Cla07g01603 | 1098 | CDD | ABC_SMC6_euk | 983 | 1098 | - | - | |
Cla07g01603 | 1098 | Coils | Coil | 655 | 710 | - | - | |
Cla07g01603 | 1098 | Coils | Coil | 312 | 332 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01603 | Cla-Chr7:33341372 | Cla09g00408 | Cla-Chr9:3894946 | 1.62E-18 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla07g01603 | K22804 | - | csv:101208493 | 1909.81 |