Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla07g01624 ATGATGCCCAAATGTAAAACCTTCACAACAACGACAACCCATGCAAAATTAGACAAATACCAAGAACATGATGAATATGGGTCCTTCGCCGGATCTTCACGGCGGCGCGTGCTCGACCCACGCGCAGCGTGGGTCCAGCGGTGGAATCGCGTGGTTCTTCTGGCACGTGCAGCCTCGGTGGCGGTTGACCCGCTCTTCTTTTACGTCATTTTCCTCACCAAGGCTGGCTCGCCCTGCTTCTACCGGGATACGGCTATTGCTGCCGTCGTCACCGCCGTACGCACGTGCGTGGACATGGTGCACGTCTGCCACGTGTGGATGCAGTTCCGTCTGGCGTTCATTTCGACGGCGTCTTTGGTGGTGGGAAGTGGAAGCCTCGTGTGGGACGCACGTGCCATTACTTCTCACTATTTGAGGTCCTTCAGAGGCTTTTGGCTCGATTTGTTTGTCATTATTCCCATCCCTCAGGTTGTGACATGGTTGATTTTGCCAAAACTAATGAGAGAAGAAGAGATAAAAAAGATGATGAAAGTGGTTTTATTGAGCTACCTATTTCAGTTCCTTCCAAAGCTTTACCACAGCATTTACTTGATGAAGAAGCTCCAAAAAGTCACTGGCTTTATCTTTGGCAGCATTTGGTGGCGCTTTAACCTCAATGTATTTGCCTATTTGATTGCCTCTCATGTTGTAGGTGGATGCTGGTATCTCCTTGCGACGCAACGACTAATCTCGTGCCTGGAACAAAAATGCGAGAAACGAAAAACGTGCAAATTGGCATTGTCTTGCTCCATATCTGGCTACAAGGGGGCTGGTAATTTTGGAGCTTTTTCCCATGGTAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCGATGGACCCTTTAGCTATGGAATTTATGAGCCTGTTCTTTTGGTATTCTCTAGCAACTCTCTAGCTGTTAGAATTCTTTATCCTATCTTCTGGGGTTTATTGAACCTAAGTTCCTTTGGGAATGAACTTGATCCCACATGTGATTTGGTGGAAGTGATATTCAGTAGCTGCATCACACTTGGGGGATTGGTGCTGTTTGTTACCCTAATTGGAAATATACAGATTTTCTTGCAAACTGTCATGGCAAGTAAGGAGGATATGCAAATACGGTTTCGAGATATGGAGTGGTGGATGAAGAGGCGACAATTGCCCATTCATTTGAGAGAAAGAGTTCGCAATTTTGAATATCAAAGGTGGGTAGCCATGGGAGGGCTAGATGAGACCGAACTAATCGGAGGCTTGCCCGATGGCCTTCGTCGAGACATCAAACGTTACCTTTGTTTAGACCTTGTTAAGAAGGTACCCTTCTTCCACATGCTCGATGATCTCATACTCGATAACATTTGTGATCGTGTTAAACTGCTCCTATTTGCTAAAGGTGAAAAGATAGTAAGGGAGGGAGACCCTGTGCAAAGAATGGTGTTTATTATTGAAGGATGCGTGGAGCGTAGGCGAGGATGCCTAAGCAAAGGCTTTGTAGGCACCAGTTGTTGGCTCAATTCCGGTGGCTTTTTTGGGGAGGAGCTACTGTCGTGGTGTCTCCGATTTCAACACCCTCCATATTTCGATAAGCTTCCAACCTCATCGGCAACATTTACATGTTTACAGCCAGTGGAAGCATATGGCCTCGACGCATCCGATCTCAAATACATTACCAAACACTTCCGTTACATGTTTGCTACTGAAAAGCTGAAGCAAACTATGCGTTATTACTCTTCATATTGGCGAACATGGGGAGCTGTGATTATTCAGTTTTCATGGCGTCGTCATCGGACACAAAACCGACCCATGACTCACAACCGACTAAGGCAGTATCATATACAATTTTCTTATCTTTGA 1875 45.92 MMPKCKTFTTTTTHAKLDKYQEHDEYGSFAGSSRRRVLDPRAAWVQRWNRVVLLARAASVAVDPLFFYVIFLTKAGSPCFYRDTAIAAVVTAVRTCVDMVHVCHVWMQFRLAFISTASLVVGSGSLVWDARAITSHYLRSFRGFWLDLFVIIPIPQVVTWLILPKLMREEEIKKMMKVVLLSYLFQFLPKLYHSIYLMKKLQKVTGFIFGSIWWRFNLNVFAYLIASHVVGGCWYLLATQRLISCLEQKCEKRKTCKLALSCSISGYKGAGNFGAFSHGNNLTKIKSLCLEVDGPFSYGIYEPVLLVFSSNSLAVRILYPIFWGLLNLSSFGNELDPTCDLVEVIFSSCITLGGLVLFVTLIGNIQIFLQTVMASKEDMQIRFRDMEWWMKRRQLPIHLRERVRNFEYQRWVAMGGLDETELIGGLPDGLRRDIKRYLCLDLVKKVPFFHMLDDLILDNICDRVKLLLFAKGEKIVREGDPVQRMVFIIEGCVERRRGCLSKGFVGTSCWLNSGGFFGEELLSWCLRFQHPPYFDKLPTSSATFTCLQPVEAYGLDASDLKYITKHFRYMFATEKLKQTMRYYSSYWRTWGAVIIQFSWRRHRTQNRPMTHNRLRQYHIQFSYL 624
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 33577644 33581504 - ClCG07G017020.2 Cla07g01624 277612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla07g01624 624 Pfam Ion transport protein 48 369 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cla07g01624 624 Gene3D Jelly Rolls 446 569 IPR014710 -
Cla07g01624 624 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 33 610 - -
Cla07g01624 624 ProSiteProfiles cAMP/cGMP binding motif profile. 448 522 IPR000595 -
Cla07g01624 624 CDD CAP_ED 448 563 IPR000595 -
Cla07g01624 624 SUPERFAMILY Voltage-gated potassium channels 43 370 - -
Cla07g01624 624 SUPERFAMILY cAMP-binding domain-like 376 568 IPR018490 -
Cla07g01624 624 Gene3D Helix hairpin bin 374 439 - -
Cla07g01624 624 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 33 610 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01624 Cla-Chr7:33577644 Cla11g00434 Cla-Chr11:5006657 0 dispersed
Cla07g01624 Cla-Chr7:33577644 Cla01g00052 Cla-Chr1:416897 1.39E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla07g01624 K05391 - zju:107414103 801.586