Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g00068 | ATGGGCTGCATGTGCTCAAGAGATTCCTCAGAACCAGAGGATAGCGATCACAAAGAGTCTGAAAAAGATTTGAACAAATCTTCAGTCCAGTTGGTTGCCCCTTCTCCCTCAAAAAGAGAGGATATGCTGTTAGAGATTCAGTTGTCAAGGCAGGCATCTAAACCAAATGGGGGTTCTGTTCATAAAGCAAAGGCCAATGGAGGTTCTGTCCATCGAGCAAAGGAGGATGATGAATCTGAGAATAAATCCATAAAGGCTGCAAAACCAAATAATGATAATGCTTCAGGAGGTGGAAAGCAGCCTGAGATTTTTCGGTTAGCTAGCTTGTCTAAAGGGGCTGAAGCTGAACTTGTCATGGCTGGATGGCCTTCATGGTTAGCTTCCGTTGCTGGAGAAGCCATCAAAGGGTGGGTGCCTCGCCGGGCTGACTCCTTTGAAAAGTTAGACAAACCCTGGGATGGGTATGTAGATAGGAATTCCAAGTTAAAAGATTTGTCCATTCTGAATACGATTGGACAGGGAACTTACAGCAGTGTATATAAAGCCCGTGACCTTGAAACATGTAAAATTGTGGCATTGAAAAAAGTAAGATTTGTAAATATGGATCCCGAAAGTGTCCGTTTTATGGCTAGGGAAATCTATATTTTGCGCAAACTTGATCATCCAAATGTTATGAAGCTTGAGGGTCTAGTCACTTCCAGAATGTCGGGCAGCTTGTACCTTGTTTTTGAGTACATGGAGCATGACCTTGCTGGCCTTGCAGCAGCTCCTGGACATAAGTTTACGGAGGCTCAGATTAAATGTTATGTGCAACAATTGCTGCATGGACTTGAGCACTGTCATAGTCGAGGAATTCTGCACCGGGATATCAAAGGTTCAAATCTTCTTGTTGACAATAATGGTGTGCTTAAGATTGGAGACTTTGGTCTTGCTACCTTTTTTCAGCCTGATCAAAAGCAGCCATTGACAAGCCGGGTTGTGACGTTGTGGTACAGGGCACCTGAGCTTTTGCTTGGTGCTACCCAATATGGACCTGCCATAGATCTCTGGAGCTGTGGCTGTATCATTGCTGAGCTATTTGCTGGAAAACCTATTATGCCAGGAAGAACAGAGGTGGAACAAATGCACAAAATTTTTAAGCTCTGTGGTTCACCATCTGAGGAGTTCTGGCAGAGAACAAAGTTGCCACATGCAACCAGCTTCAAACCTCAACACCGTTATAAAAGCTGCCTTTCTGAGACATTTAAAAGTTTCCCTTCTTCAGCTCTGGCTCTTGTTAATAAGCTACTTGCTATTGAACCAGAGCACAGAGGATCAGCTACTTTAGCCCTCAGGAGTGAGTTTTTCAGAACAGAACCTCTCCCTTGTGACCCGTCAAGCTTACCAAAATATCCGCCGAGCAAAGAATTCGATGCCAAGCTGCGGAATGAAGAAGAAAAAAAGTATGGTTCGAAACTTGTTTCTCTAGTAGTCATTGCGGAAGCTGTGAAGGGACGCCATCCTGAATCGGTAAGAAGGGGCTCAAGAGACACCAAAGCAGTTCCTACTCCCGAATTCAATACTCAAGGAGATATTACTATGAAGGCACACCCAATCTCGAAAAAAATGAGTGTGAAATACAACCCTCAAGAAGACAGTGAGCCTCCAAGAGTTGCGCAAAATCGGTACAACCACTCAACTTCTATGGTGCACCCAAGCATTGTAGGTTTATGGGGTAAGCCTACCGAAGCCTTGAGAAATTGTGCAGAGTCAAAGACAAAGAAATCTCAGATGCATCAGTCAGTGGGAGATTTATCAACCTCTTCTCTGAAGAAGGAAGACTCGGTGTCTACTAAAGATTGTGGAATGGGTTATGTTCAAAAGAAGAACAGAATACACTACTCAGGACCATTGGTGCCTACAGGGGGAACCATTGAAGACATGCTGAAGGAGCACGAGAGACAAATCCAGCAGGCTTTTCGAAAGGCACGACTCGACAAAGCGAAGACAAACAAGAGTTATGGTGATCAGAGACTAACTTCGGTAACATCAAAGGTAGAAGATGGTTCTGCTGCTCTCAAACTGAATGCTGCAACTGTCTGCAAAGAACCATAA | 2094 | 44.22 | MGCMCSRDSSEPEDSDHKESEKDLNKSSVQLVAPSPSKREDMLLEIQLSRQASKPNGGSVHKAKANGGSVHRAKEDDESENKSIKAAKPNNDNASGGGKQPEIFRLASLSKGAEAELVMAGWPSWLASVAGEAIKGWVPRRADSFEKLDKPWDGYVDRNSKLKDLSILNTIGQGTYSSVYKARDLETCKIVALKKVRFVNMDPESVRFMAREIYILRKLDHPNVMKLEGLVTSRMSGSLYLVFEYMEHDLAGLAAAPGHKFTEAQIKCYVQQLLHGLEHCHSRGILHRDIKGSNLLVDNNGVLKIGDFGLATFFQPDQKQPLTSRVVTLWYRAPELLLGATQYGPAIDLWSCGCIIAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEFWQRTKLPHATSFKPQHRYKSCLSETFKSFPSSALALVNKLLAIEPEHRGSATLALRSEFFRTEPLPCDPSSLPKYPPSKEFDAKLRNEEEKKYGSKLVSLVVIAEAVKGRHPESVRRGSRDTKAVPTPEFNTQGDITMKAHPISKKMSVKYNPQEDSEPPRVAQNRYNHSTSMVHPSIVGLWGKPTEALRNCAESKTKKSQMHQSVGDLSTSSLKKEDSVSTKDCGMGYVQKKNRIHYSGPLVPTGGTIEDMLKEHERQIQQAFRKARLDKAKTNKSYGDQRLTSVTSKVEDGSAALKLNAATVCKEP | 697 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 1510168 | 1514437 | - | ClCG08G000660.1 | Cla08g00068 | 277723 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g00068 | 697 | ProSiteProfiles | Protein kinase domain profile. | 165 | 449 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla08g00068 | 697 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 166 | 659 | - | - | |
Cla08g00068 | 697 | MobiDBLite | consensus disorder prediction | 584 | 610 | - | - | |
Cla08g00068 | 697 | CDD | STKc_CDK9_like | 167 | 449 | - | - | |
Cla08g00068 | 697 | Coils | Coil | 642 | 662 | - | - | |
Cla08g00068 | 697 | SUPERFAMILY | Protein kinase-like (PK-like) | 163 | 457 | IPR011009 | - | |
Cla08g00068 | 697 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 285 | 297 | IPR008271 | GO:0004672|GO:0006468 | |
Cla08g00068 | 697 | Gene3D | Phosphorylase Kinase; domain 1 | 156 | 247 | - | - | |
Cla08g00068 | 697 | MobiDBLite | consensus disorder prediction | 587 | 605 | - | - | |
Cla08g00068 | 697 | PANTHER | CELL DIVISION PROTEIN KINASE | 78 | 150 | - | - | |
Cla08g00068 | 697 | PANTHER | CELL DIVISION PROTEIN KINASE | 166 | 659 | - | - | |
Cla08g00068 | 697 | MobiDBLite | consensus disorder prediction | 68 | 85 | - | - | |
Cla08g00068 | 697 | ProSitePatterns | Protein kinases ATP-binding region signature. | 171 | 194 | IPR017441 | GO:0005524 | |
Cla08g00068 | 697 | SMART | serkin_6 | 165 | 449 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla08g00068 | 697 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 78 | 150 | - | - | |
Cla08g00068 | 697 | MobiDBLite | consensus disorder prediction | 9 | 25 | - | - | |
Cla08g00068 | 697 | MobiDBLite | consensus disorder prediction | 1 | 99 | - | - | |
Cla08g00068 | 697 | Pfam | Protein kinase domain | 167 | 449 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla08g00068 | 697 | MobiDBLite | consensus disorder prediction | 501 | 523 | - | - | |
Cla08g00068 | 697 | Gene3D | Transferase(Phosphotransferase) domain 1 | 248 | 488 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g01554 | Cla-Chr1:30173845 | Cla08g00068 | Cla-Chr8:1510168 | 4.62E-139 | dispersed | |
Cla08g00068 | Cla-Chr8:1510168 | Cla11g00055 | Cla-Chr11:721799 | 0 | dispersed | |
Cla10g01200 | Cla-Chr10:26659224 | Cla08g00068 | Cla-Chr8:1510168 | 5.30E-16 | dispersed | |
Cla08g00068 | Cla-Chr8:1510168 | Cla03g01582 | Cla-Chr3:31590266 | 5.31E-175 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80717 | PF00069 | Pkinase | 1.10E-69 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g00068 | K08819 | - | csv:101208709 | 1183.7 |