Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g00124 ATGGCTCCATCAATTTTTCTTCATGTGTTCTTCTATATGGCTCATTTTTCTTTTGCAGATTCTACAATTTTATATAATGGATTTCGCGAGGCAACAAGATTGATTCTTGATGGCGCGGCGGTTGTTAAGCCGTCTGGTGCCTTACGCCTCACCGACAATTCACAAAATGTAGTAGGCCATGCCTTCTTTCCTGATGCAGTTAAAATGTTTGATAAAAGTTCTCCTTCATATCCCAACGCTTCATCTTTCAGTACAACTTTTGTGTTTGCTATCGAACCTTCAAGCCCTGGCCAAGGTGGGCACGGCTTAGCCTTCACCTTGGCTCCATCAACCAAGTTTGATGGAGCTGAAAGTGGACACTACCTCGGCTTATTCAACCCGGTCAATGATGGAAACCCATCCAACCATATAATCGCTGTCGAATTCGACACTGTTAATGGTCATGGTGAAGGAAGGAATTCCAGAGGAAACCATATTGGGATTAACATCAATGGCATTTCATCAGTTACATCTAGTCCAACTTCTTCTTCCTATTATCTTACTGATGATACAATTTGGAGAGAAATTCAAATTGATTCTGGTGATAAATTCGCTGTTTGGATTGAATATGATGCTCTAAGTAGAATTTTGAACGTCACTATAGGTTTTATGGAGCAAAAGCCAGAAAAGCCACTCATCTCATATCCTATTGATCTAACATCTGTTGTGAAGGAACAAATGTTCGTGGGGTTTGCCGCATCGACCGGGATCGAAACAAGCTCTCATTACATTTTGGGATGGAGCTTTGCAGTCAATGCACCGGCGCGGCAACTGTGGTACTCTCGCCTTCCCGACGGACCAAAAGAACAAAATCTTTCTTCTTCATCCAATAATCCCCAGTTGAAAGTTGTTCTAGCCGTTTCAACTATTGTGGCCATTTTGGGAATTGTTTTCTTAACCTTCTTGTTTATAAGAATGAAGAAGACAGAGAACTTGGAGGACTGGGAAAGAGATTGCCCTCACAGATTCAACTACAAGGATCTTTACACAGCAACTAATGGATTTAATGATAGTGAGCTAATTGGAATTGGGGGATTTGGGTCAGTATATAAAGGCAAGTTACGTTCAACTGGAGCTGAGATTGCTGTGAAGAGAGTCAAACGAAACTCAAGCCAAGGAATGAAGGAATTCGCTGCGGAAATCGAAAGCTTGGGACGATTAAGACACAAGAACTTGGTTAATCTTCAAGGATGGTGCAAGAAAAAGAACGATCTTCTCATAGTTTATGATTATATTCCAAATGGGAGTCTTCATTCTCTTCTCTATACTCCAAAACAGAGCTTGGTATTGAAATGGGAGCAAAGATTCAACATCCTTAAAGGCATTGCTGCAGGATTACTATATCTTCATGAAGATTGGGAGCAAGTAGTGATCCACCGAGACGTAAAGCCAAGCAATGTTCTGATTGACGCTGACATGAATGCCCGGTTGAGCGATTTCGGATTGTCCAGGCAATACGACCACGACGAAATATCACACACGACTCGAGTCGTCGGCACAATAGGCTACATACCACCAGAGTTGTTTCGCACGGGGAAGGCGTCGAAGAGCGCGGATGTGTTTGCATATGGAGTTCTGCTGCTAGAAGTGGCATGTGGAAGAAAGCCTCTAGGATCAAACCAATTCATATTGGTGGACTGGGTGATGGAATGGTATGAAAGAGGGGACATTCTTTATGTGGTTGATTCAAAATTGGATTCAATTTATAAGGTGGAAGAGATGGAGATGGTGTTGCAACTTGGCCTTCTTTGTACGCATTGGAAACTAGAAGCTCGACCGTCAATGAGACAAGTCATGAGGTTCCTTAATGGAGAAGATCCACTTCCTGCATTCGATGCGTGGGCTAGTTCTCAAAGTATCTTCGAACCTACTTCGAGCTTGACAATGAATGATCGCTCATCGGCCCTGTCCATCGGCCTTATCTCCTCTGCCTCCATAAACGTAGGTAGATAG 1992 42.87 MAPSIFLHVFFYMAHFSFADSTILYNGFREATRLILDGAAVVKPSGALRLTDNSQNVVGHAFFPDAVKMFDKSSPSYPNASSFSTTFVFAIEPSSPGQGGHGLAFTLAPSTKFDGAESGHYLGLFNPVNDGNPSNHIIAVEFDTVNGHGEGRNSRGNHIGININGISSVTSSPTSSSYYLTDDTIWREIQIDSGDKFAVWIEYDALSRILNVTIGFMEQKPEKPLISYPIDLTSVVKEQMFVGFAASTGIETSSHYILGWSFAVNAPARQLWYSRLPDGPKEQNLSSSSNNPQLKVVLAVSTIVAILGIVFLTFLFIRMKKTENLEDWERDCPHRFNYKDLYTATNGFNDSELIGIGGFGSVYKGKLRSTGAEIAVKRVKRNSSQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLHSLLYTPKQSLVLKWEQRFNILKGIAAGLLYLHEDWEQVVIHRDVKPSNVLIDADMNARLSDFGLSRQYDHDEISHTTRVVGTIGYIPPELFRTGKASKSADVFAYGVLLLEVACGRKPLGSNQFILVDWVMEWYERGDILYVVDSKLDSIYKVEEMEMVLQLGLLCTHWKLEARPSMRQVMRFLNGEDPLPAFDAWASSQSIFEPTSSLTMNDRSSALSIGLISSASINVGR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2471660 2473651 + ClCG08G001210.1 Cla08g00124 277779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g00124 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Cla08g00124 663 Pfam Legume lectin domain 24 270 IPR001220 GO:0030246
Cla08g00124 663 SMART serkin_6 348 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g00124 663 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246
Cla08g00124 663 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
Cla08g00124 663 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Cla08g00124 663 PANTHER - 8 638 - -
Cla08g00124 663 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Cla08g00124 663 SUPERFAMILY Protein kinase-like (PK-like) 332 640 IPR011009 -
Cla08g00124 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 280 IPR013320 -
Cla08g00124 663 CDD STKc_IRAK 354 617 - -
Cla08g00124 663 Gene3D Transferase(Phosphotransferase) domain 1 425 620 - -
Cla08g00124 663 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g00124 663 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g00124 663 Gene3D - 16 267 - -
Cla08g00124 663 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VI.1-RELATED 8 638 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00266 Cla-Chr7:2951948 Cla08g00124 Cla-Chr8:2471660 3.09E-84 dispersed
Cla08g00124 Cla-Chr8:2471660 Cla10g02115 Cla-Chr10:36830202 3.87E-43 dispersed
Cla08g00124 Cla-Chr8:2471660 Cla10g02025 Cla-Chr10:36020308 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80719 PF00069 Pkinase 8.50E-51 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g00124 - - csv:101205100 1040.8