Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g00363 | ATGCTTGGGGACTCCACTACTTCCGTCTTGGGCGGCGGCGCCGGAGGAGGAGAGGCCGCTGTGCCGGAGACGACTCATCATCACGATGGACTGATGGGGGACATGGAGGAGAATAATAACAATTCTGGTGAGGATGAGAGAGGGAGAAGCGGAGGTGGCGGCGGAGACGACGGTGACCGGAGCTTCGGCGGAAACCGGTGGCCGAGACAAGAAACTTTAGCTCTCTTGAAAATACGGTCAGAAATGGACGTGGCTTTTCGAGATGCAAGCGTTAAAGGCCCTTTGTGGGAACAAATTTCCAGGAAATTGGGGGAGCTTGGGTATCATCGAAGTGCAAAAAAATGCAAGGAGAAATTTGAGAATGTTTACAAATATCACAAAAGAACTAAAGAAGTTAGAAGTGGGAAACCGGATAGCAAAACTTATAAGTTCTTTGAACAATTAGAAGCTCTTGAGAATCACCCTCCTCTTAATTTCCACTCCCATTTGTCTAAACCAACTCCTCCGCCGCAGCCGCCACCGCCTACCGCCGTCATTTCCCCCATTCCTTCAAGTACTGTTCCATCCACCACTCTACCTCACTTGATGAACATATCATTCTCTCAACCAAACCCCACAATTCATCTCCCATCTCCTCCGCCCCCTCCTGCTCCGTTGCCATTGAATAACCCTACAAGTTTACCCACCACCGTCCCTCCCTCCATGCCGTTTCAAATCAATGTGCCTTCGGCGGGAGTGGGGTTTCAGAGCATTGAAGCGGATCTCATCTCGAACTCGACGTCTGATGATATCAATTCGTCAACGTCATCAGATGAGGCGTCGAGAAAGAGGAGGAGGAAGAGGAAATGGAAGGACTTTTTTGAGAGATTGATGAAGGAAGTGATTCAAAAGCAAGAGGAAATGCAAAAGAGATTCTTGGAAGCAATTGAGAAGAGGGAGCAAGAGAGAGTTGTGAGAGAAGAAGCTTGGAGGATGCAAGAGATGGCCAAAATCAATAGAGAAAGAGAGATTTTAGCTCAAGAAAGATCAATGGCAGCTGCAAAAGATGCTGCGATTACATCGTTCCTTCAAAAAATAACTGAATCCCAACACAACAATACCAACAACAACGCATCACAACCGTCACCACCGCCCCCGCCACCGCCACCGTCCCAACAACAACAACAACCAATTCCAACGTCAAATCCAACACCAGTCGTGCAACCTTCACCGCGACCGCCACCTCCGGCCGCACCACAAGCTTCCACATTGCAAGTTGTTGTTCCCAATTCCACCCCACAAAAAGTGGGGAACAATAATGAATTGTTGCAAATGGAAATCATGAAAATGGATCATAATGGTGGGGAGAATTATAGCATTAGCCCAGCTTCAAGCTCATCAAGATGGCCAAAAGTGGAAGTTCAAGCACTGATCAAATTGAGAACAAACCTTGAAACCAAATATCAAGAGAATGGGCCAAAAGGGCCTTTATGGGAAGAGATATCATCAGCCATGAAGAAACTTGGGTACAATAGAAATGCAAAGAGGTGCAAAGAGAAGTGGGAAAACATAAACAAATACTTCAAGAAAGTGAAGGAAAGTAGAAAAGCAAGGCCTGAAGATTCCAAGACTTGCCCTTATTTTCACCAGCTTGATGCTTTGTATAGGGAGAAGAGCAACAACACGAACAACAACATAATCGGATCCTCGACGCAAATTATGCAGCATCAACAGCAGCCATTGATGGTTCGTCCCGAGCAACAATGGCCTCCCCAACAAGAGATCACCCGCCCCGACTCAGGAAACGAAGAGATGGAGAGTGAACCAATGGATCGTGATGATAAAGACGACGATGAAGAAGATGAAGAGGAAGAGGACGAAGGTGGAGGGAACTATGAGATTGTGGCAAGCAAACCAGCTTCAGTGAGTGCTGCAGAGTGA | 1920 | 47.08 | MLGDSTTSVLGGGAGGGEAAVPETTHHHDGLMGDMEENNNNSGEDERGRSGGGGGDDGDRSFGGNRWPRQETLALLKIRSEMDVAFRDASVKGPLWEQISRKLGELGYHRSAKKCKEKFENVYKYHKRTKEVRSGKPDSKTYKFFEQLEALENHPPLNFHSHLSKPTPPPQPPPPTAVISPIPSSTVPSTTLPHLMNISFSQPNPTIHLPSPPPPPAPLPLNNPTSLPTTVPPSMPFQINVPSAGVGFQSIEADLISNSTSDDINSSTSSDEASRKRRRKRKWKDFFERLMKEVIQKQEEMQKRFLEAIEKREQERVVREEAWRMQEMAKINREREILAQERSMAAAKDAAITSFLQKITESQHNNTNNNASQPSPPPPPPPPSQQQQQPIPTSNPTPVVQPSPRPPPPAAPQASTLQVVVPNSTPQKVGNNNELLQMEIMKMDHNGGENYSISPASSSSRWPKVEVQALIKLRTNLETKYQENGPKGPLWEEISSAMKKLGYNRNAKRCKEKWENINKYFKKVKESRKARPEDSKTCPYFHQLDALYREKSNNTNNNIIGSSTQIMQHQQQPLMVRPEQQWPPQQEITRPDSGNEEMESEPMDRDDKDDDEEDEEEEDEGGGNYEIVASKPASVSAAE | 639 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 9412698 | 9415755 | + | ClCG08G003510.1 | Cla08g00363 | 278018 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 22 | 54 | - | - | |
Cla08g00363 | 639 | ProSiteProfiles | Myb-like domain profile. | 65 | 123 | IPR001005 | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 566 | 591 | - | - | |
Cla08g00363 | 639 | Gene3D | - | 462 | 523 | - | - | |
Cla08g00363 | 639 | Gene3D | - | 67 | 128 | - | - | |
Cla08g00363 | 639 | CDD | GT1 | 65 | 130 | - | - | |
Cla08g00363 | 639 | CDD | GT1 | 461 | 525 | - | - | |
Cla08g00363 | 639 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 20 | 632 | - | - | |
Cla08g00363 | 639 | PANTHER | - | 20 | 632 | - | - | |
Cla08g00363 | 639 | Coils | Coil | 284 | 315 | - | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 364 | 416 | - | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 182 | 205 | - | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 259 | 280 | - | - | |
Cla08g00363 | 639 | PRINTS | Proline rich extensin signature | 167 | 183 | - | - | |
Cla08g00363 | 639 | PRINTS | Proline rich extensin signature | 203 | 215 | - | - | |
Cla08g00363 | 639 | PRINTS | Proline rich extensin signature | 215 | 236 | - | - | |
Cla08g00363 | 639 | PRINTS | Proline rich extensin signature | 374 | 399 | - | - | |
Cla08g00363 | 639 | Pfam | Myb/SANT-like DNA-binding domain | 65 | 151 | IPR044822 | - | |
Cla08g00363 | 639 | Pfam | Myb/SANT-like DNA-binding domain | 460 | 547 | IPR044822 | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 566 | 639 | - | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 206 | 231 | - | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 599 | 623 | - | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 162 | 181 | - | - | |
Cla08g00363 | 639 | ProSiteProfiles | Myb-like domain profile. | 454 | 518 | IPR001005 | - | |
Cla08g00363 | 639 | SMART | sant | 63 | 125 | IPR001005 | - | |
Cla08g00363 | 639 | SMART | sant | 458 | 520 | IPR001005 | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 372 | 413 | - | - | |
Cla08g00363 | 639 | MobiDBLite | consensus disorder prediction | 156 | 238 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00116 | Cla-Chr1:1043610 | Cla08g00363 | Cla-Chr8:9412698 | 1.31E-125 | dispersed | |
Cla02g00074 | Cla-Chr2:739567 | Cla08g00363 | Cla-Chr8:9412698 | 2.08E-21 | dispersed | |
Cla06g00913 | Cla-Chr6:15111701 | Cla08g00363 | Cla-Chr8:9412698 | 5.46E-07 | dispersed | |
Cla08g00363 | Cla-Chr8:9412698 | Cla10g01831 | Cla-Chr10:34285311 | 8.71E-22 | dispersed | |
Cla08g00363 | Cla-Chr8:9412698 | Cla08g00365 | Cla-Chr8:9549947 | 6.67E-17 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61518 | PF13837 | Myb_DNA-bind_4 | 2.90E-21 | CL0123 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g00363 | - | - | csv:101205810 | 891.338 |