Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g00451 ATGATGTTCTTCTGGACGAAGAGCAATTCGTCAAATCTCAACTTATTGTTCTTCTCAGAGCTCCAATTCCTTTTCAGTAAAGTGTTCATTCAGTGTTTGTGGAGGATTTCTATCGGTTTGGTGATAGGAATTTCTTGCAAATATCGAATTGAAAGGTTCACAACGGCGTCGGCTGTGGAATTGCGTGGTTCTGACTGTTTGGTAGGTCTGGAGTGCTTCCTTAACGTTGTTAGGGCCCTCGGAATGGGATCATGCCTCTCTGGGGACCGGAACAAGCGAACGATCCCTTATTCTGAGCTTGCTTCCACTTCTCGTGATGATGGCGTTATTAGGCGAAGGAATTCCAAGAGGAAGATTACGAGAAAGGGTTCTTCCCCCTCGAATGACTCTTCAAGGGAGATGTCGCTTCATCGAGTTCCCGGCCGGATGTTTTTGAATGGAACAACTGATCATGCCTCGCTCTTTACTAGGCAAGGCAAGAAAGGCGTCAATCAGGATGCTATGATTGTTTGGGAGAATTTTGGTTCAAAAGAAGATACAATATTTTGTGGAGTCTTTGATGGACACGGTCCCTTTGGCCATATGGTTGCAAAGAAAGTCAGAGATTCTCTTCCTCTAAAACTGAATGCTCAGTGGGAGTTGGATGCTACCAGAAAGGAAGGGCAAAATGACATCAGATGTCAAGTGTCTCCACCAATGCTGGTTAACAAGGACTCTGGAACCTCTCATTGTGATCCTGGTCATCAGGGAAGTTACAGTGACATTTATATCATGCTGAAAGAGTCTTTTCTAAAGGCTTTTAAGGTGATGGACAAGGAGCTTAAACTACATCCATATATCGATTGCTATACCAGTGGTACAACATCAGTTGCATTGGTCAAACAGGGTCGGGATCTTATCATTGGAAATGTTGGGGACTCGCGGGCTGTTTTAGGTACCAGAGATGAATCTAACTCTCTCATTGCAGTTCAGTTGACTGTGGACCTCAAGCCAAATCTTCCAAGGGAAGCTGAAAGGATCAGACTTTGCAAAGGAAGAATCTTTGCTCTTCAAAATGAGCCTGAGATTTTTCGGGTTTGGCTTCCCAACAATGATTCTCCTGGGCTTGCTATGGCCAGAGCCTTCGGAGATTTCTGTTTGAAAGATTTTGGTGTGATAGCCGTGCCTGATGTTTCTTATTGTCATCTTACTGAGAACGATGAGTTTGTGGTACTGGCTACCGATGGGGTTTGGGATGTTCTCTCAAACAAAGAGGTTGTGGCAATTGTTGCATCATCTCCGAGATCTTCTGCAGCTCGTATCCTTGTGGACTCAGCTACTCGAGCATGGAGAATAAAGTACCCTACTGCCAAGGTGGATGATTGTGCCGTAGTCTGCCTGTACCTGGACTCTAATGAAAGTACTGCAGTAACAGCTAAAAAAAAGGTAGAAGCATTCACTAAACCGAACGTCCAAACTAATGCGATGTCGAGTTCACCAATGACATGGAAACTTAGTAGTTCCCTCAGCCTGCATTTTTCGCTATTCTCTCTCCCGAAACCTCTGATTGCTGCTTCAGGCGAGTTGGAAATAAAAGAAATATGTTTGTTTCTATTTTTATGCTCATATTTCCTCTTCATTCTTTAA 1626 43.91 MMFFWTKSNSSNLNLLFFSELQFLFSKVFIQCLWRISIGLVIGISCKYRIERFTTASAVELRGSDCLVGLECFLNVVRALGMGSCLSGDRNKRTIPYSELASTSRDDGVIRRRNSKRKITRKGSSPSNDSSREMSLHRVPGRMFLNGTTDHASLFTRQGKKGVNQDAMIVWENFGSKEDTIFCGVFDGHGPFGHMVAKKVRDSLPLKLNAQWELDATRKEGQNDIRCQVSPPMLVNKDSGTSHCDPGHQGSYSDIYIMLKESFLKAFKVMDKELKLHPYIDCYTSGTTSVALVKQGRDLIIGNVGDSRAVLGTRDESNSLIAVQLTVDLKPNLPREAERIRLCKGRIFALQNEPEIFRVWLPNNDSPGLAMARAFGDFCLKDFGVIAVPDVSYCHLTENDEFVVLATDGVWDVLSNKEVVAIVASSPRSSAARILVDSATRAWRIKYPTAKVDDCAVVCLYLDSNESTAVTAKKKVEAFTKPNVQTNAMSSSPMTWKLSSSLSLHFSLFSLPKPLIAASGELEIKEICLFLFLCSYFLFIL 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13746133 13753812 - ClCG08G004330.1 Cla08g00451 278106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g00451 541 SMART PP2C_4 140 460 IPR001932 -
Cla08g00451 541 Pfam Protein phosphatase 2C 165 444 IPR001932 -
Cla08g00451 541 CDD PP2Cc 151 462 IPR001932 -
Cla08g00451 541 SUPERFAMILY PP2C-like 150 463 IPR036457 -
Cla08g00451 541 MobiDBLite consensus disorder prediction 111 135 - -
Cla08g00451 541 Gene3D - 146 464 IPR036457 -
Cla08g00451 541 PANTHER ALPHABET, ISOFORM E-RELATED 82 472 - -
Cla08g00451 541 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 82 472 - -
Cla08g00451 541 ProSiteProfiles PPM-type phosphatase domain profile. 151 462 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00118 Cla-Chr2:1360519 Cla08g00451 Cla-Chr8:13746133 7.69E-134 dispersed
Cla08g00451 Cla-Chr8:13746133 Cla11g00927 Cla-Chr11:16035128 1.90E-176 dispersed
Cla08g00451 Cla-Chr8:13746133 Cla02g01709 Cla-Chr2:31950483 1.04E-135 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g00451 - - csv:101222320 734.176