Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g00567 ATGGCCAATGACCAGCTCCAGCTTCTGACTGTCCTTGACCGTGCAAAGACCCAATTCTACCATTTCACGGCGGTGGTAATCGCCGGAATGGGCTTCTTCACCGATTCCTACGATCTCTTCTGCATCTCTCTCGTCACAAAACTCCTCGGCCGCATTTACTACACCATCGAAGGCTCCCCCCGTCCCGGAACCCTCCCTCCCGCCGTCGCCGCCGCCGTAAACGGCGTCGCCCTCGCCGGCACTCTCGCCGGTCAACTCTTCTTCGGCTGGCTCGGCGACAAGCTCGGCCGGAAGCGCGTCTATGGCCTCACCCTCATCCTCATGGTCGTCTGTTCCATCGCCTCCGGTCTCTCCTTCAGCAGCTCTCCGACCGCCGTCATCACCACTCTCTGTTTCTTCCGATTCTGGCTTGGCTTCGGAATCGGCGGCGACTACCCTTTATCCGCTACCATCATGGCCGAATACTCCAACAAAAAAACCCGAGGTGCCTTCATAGCCGCCGTCTTCGCAATGCAGGGATTTGGAATTCTGGCCGGCGGCACGGTAGCAATTGTAATCTCGTCAATTTTCAAGACCCTTTTTAAAGCTCCACCGTACGCGGTGGACGCCATGAAGTCGACGGTTCCAGAAGCGGATTACGTATGGAGAATTATACTAATGTTGGGTTCTTTGCCTGCGGTTTTAACTTACTATTGGCGGATGAAAATGCCCGAAACGCCGCGTTACACTGCCTTGGTTGCGAACGACAATAAGAAAGCTTGTGACGACATGTCGAAAGTGTTGAATTTGGAAATTGGTCAACATGTGGTAAATGAAACCCAAATTAAAACAGACTCCAACTCGAATTCAAATTCATTTGGGTTTTTTAGTAAGAAATTTATTCAAAGACATGGGATTCATCTTTTAGGAACTGCCACTACTTGGTTTTTAATCGACGTGGCATATTATAGCCAAAATTTATTCCAAAAAGACATTTTTAGTGCCGTGGGTTGGTTGCCACAGCCCAAAACAATGAGTGCTTTAGAAGAGGTTTTCAAAATCGCCAAGGCTCAGACACTTATTGCCCTTTGTGGGACCGTTCCGGGCTATTGGGCCACGGTTCTTCTAATAGACCGGGTTGGTCGGTTTTTTATTCAGGTGGTTGGGTTTTTCTTCATGACGGTTTTTATGTTTGCGCTTGCTATTCCCTACCATCATTGGACCGGGAACCATGTGGGGTTTGTTGTTATGTATGGCCTTACTTTTTTCTTTGCTAATTTTGGTCCTAATAGTACTACCTTTGTTGTCCCTGCTGAGATTTTTCCGGCCCGGTTCCGGTCCACTTGTCATGGGATATCGGCTGCAGCTGGGAAAGCCGGAGCTATCTTTGGAGCTTTTGGGTTCTTGTATGCGGCTCAGAGTCAGGACCCGACAAAGACCGATGCCGGCTACCCAGCCGGGATTGGAATGAGGAATTCTTTGATCATTTTGGGAGTTGTTAATGTGTTTGGATTGCTTTTTACTTTTTTGGTTCCGGAATCTAAAGGGAAGTCTTTGGAAGAAATGTCGAAGGAGGATCAAGTTGAAGAAGAACATGAAGAAAGTAAGGAGCAAGTTAATGGAGTTGAACAGGTTTAG 1617 48.61 MANDQLQLLTVLDRAKTQFYHFTAVVIAGMGFFTDSYDLFCISLVTKLLGRIYYTIEGSPRPGTLPPAVAAAVNGVALAGTLAGQLFFGWLGDKLGRKRVYGLTLILMVVCSIASGLSFSSSPTAVITTLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGAFIAAVFAMQGFGILAGGTVAIVISSIFKTLFKAPPYAVDAMKSTVPEADYVWRIILMLGSLPAVLTYYWRMKMPETPRYTALVANDNKKACDDMSKVLNLEIGQHVVNETQIKTDSNSNSNSFGFFSKKFIQRHGIHLLGTATTWFLIDVAYYSQNLFQKDIFSAVGWLPQPKTMSALEEVFKIAKAQTLIALCGTVPGYWATVLLIDRVGRFFIQVVGFFFMTVFMFALAIPYHHWTGNHVGFVVMYGLTFFFANFGPNSTTFVVPAEIFPARFRSTCHGISAAAGKAGAIFGAFGFLYAAQSQDPTKTDAGYPAGIGMRNSLIILGVVNVFGLLFTFLVPESKGKSLEEMSKEDQVEEEHEESKEQVNGVEQV 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17260734 17262350 - ClCG08G005440.1 Cla08g00567 278222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g00567 538 TIGRFAM 2A0109: phosphate:H+ symporter 12 518 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cla08g00567 538 MobiDBLite consensus disorder prediction 510 538 - -
Cla08g00567 538 Coils Coil 518 538 - -
Cla08g00567 538 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Cla08g00567 538 Gene3D MFS general substrate transporter like domains 272 533 IPR036259 -
Cla08g00567 538 CDD MFS_PhT 25 508 - -
Cla08g00567 538 Pfam Sugar (and other) transporter 26 517 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cla08g00567 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857
Cla08g00567 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 526 - -
Cla08g00567 538 SUPERFAMILY MFS general substrate transporter 12 518 IPR036259 -
Cla08g00567 538 PANTHER PHOSPHATE TRANSPORTER, PUTATIVE-RELATED 3 526 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00448 Cla-Chr5:3994632 Cla08g00567 Cla-Chr8:17260734 0 dispersed
Cla07g00094 Cla-Chr7:1073527 Cla08g00567 Cla-Chr8:17260734 0 dispersed
Cla08g00567 Cla-Chr8:17260734 Cla11g01848 Cla-Chr11:32043831 4.44E-179 dispersed
Cla08g00567 Cla-Chr8:17260734 Cla06g00662 Cla-Chr6:8381823 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g00567 K08176 - csv:101205342 942.569