Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g00674 ATGGCGGTGAATTTTACCTCCAATGTGTATGCTAAACCCAACGGCCAAACAGAGGAAGCTCAGTGGCGGCCGGCGGGCAGTTGTCCATCTCCACTCACTTCTTTCTATTCATCAAACCTCTCCGCAGGCTTCGAACTCCAAACCCAATTCCTCTTCTTCCATTTTAGAATGTTGATGAACTCATCTTCTTCTCCGATCATCTTCTTCTTCTTGATTCTCTCCCACTTCCCCCTTCTTTCTCTTTCTTTCTCTCCGAATCAAAACATTACCCTCTCCGGCGATGCCCATCTCAGAAACAACGCCATTTTCCTCACTCAAGAACTCAATTGCCTTCCCTTTTCTTCTAATTCCTCTTCCTCTTCTGGCTTCGGCACCGCCTTCTACATAAACCCTATTCGCTTTCTTGATTCCTCCACCAACTCCACCGCTTCTTTCTCCTCTCGCTTCTCCCTCTCCATCCTCCCCACCCCACTTTGCCCTTTCGCCGACGGAATCGCTTTCCTCATCACCTCCGATTCCAAATCTTTCAGCCGTTCTTATGGTTATATGGGCCTCCCCGACCCCCCTCTTAACTCCCATTACTCGTTCGTCGCTGTCGAATTCGACACCAATTTCGACCCTAATCTCGGTGACATTAACGACAACCATCTCGGCCTCGATGTCAATTCAGCTACCTCTTTGACCTCTGTGGATTTTGGGTCCAGAGGCATTGTTCTCAAAAATGGCAGACAGATTACTGCTTGGATTGAGTACAGAGATGACTCGAAAACGATCCAGGTTTGGGTTGGTTATTCTCAAACAAGGCCTGTAAATCCTCTTCTAGTTGCGCAGGTTGACCTTTCTAAGCAATTTAAAGAGTTTATGTATGTGGGATTCTCTGCTTCTAATGGACAGGGCTCTGCTCTTTACATTGTTGATAGATGGAGATTCAGAACTTTTGGGTTGATTCCTTCATTGAGTCCTGTTGATACTATTAATGAAGGAAATTGTTTTATGTGTTCGTCAGAGGATTCGAATTCTAGTAGTAGTCGTTTTGTTGATGTTCGTAAAAGGAGGAAGAAGATTGGAGAGATGACTCTTGGATTGGGAGGTTTGGCTGCATTTGTCTGTTCTATTACTGCAATTTTTGGGTTGGTTAGCTTTGTTTTGATAAAGAAGTTGAGAGGAAGAATGTGTAGAGGCAGAGCAATCCACAGAACTTGTCAAGTTGAGATGAACAGAGTTCCAACAAGATTGTCTCTTGGGGAGATAAAGTTAGCTACAATGGGTTTTAATCAAAATAGAGTTGTTGGGGAAGGTGGTTCTGCAACTGTTTACAAAGGGTCTCTTGCATCAGGTGGAGAAGTGGCTGTTAAACGTTTCGAGCGAGGCACGGCGAACAACCGTCTATGCCATCCTTTCACGACAGAGTTTGCAACGATGGCGGGATGCTTACGACACAAGAATTTGGTTCAGCTGCATGGATGGTGTTGTGAAGCAAATGAATTGGTGCTTGTTTATGAGTATTTAGCCAATGGAAGCCTTGCCAAACTTCTTCACAACACATCCCCCAATTCACAATTTGTTCTTCCTTGGAAGAAGAGGTTTTCCGTAGTTCTTGGGGTTGCTTCTGCATTGACATATCTCCATGAAGAGTGTGAAAGCCAAATTATCCATAGAGATGTCAAGACTTGCAACATTATGCTTGATGCAGACTTCAATGCGAAACTCGGGGATTTCGGTCTAGCAGAAGTGTATGAACACAGTTCGATCACAAGGGAAGCAACCATACCGGCTGGAACAATGGGCTATCTTGCACCTGAATACGTTTATTCCGGTGTTCCCACCGTGAAAACTGATGTTTACAGCTTTGGTGTGGTGATGCTTGAAGTTGCGTCAGGAAGGAGGCCTGTAAATGAAGACGGGACAGTGCTTGTCGATTGGATTTGGGATTTATGGGAAGTGGGGAAACTGATTGAAGCATCTGATTCAAGGTTGATGGGAAACTACAACATAGTAGAAATGGAGAGAATGCTAATGGTAGGACTTTTTTGTGTACATCCAAATCATGAAAAGAGACCAACTGTGAAAGAAGCTGCAAGAATTCTTAAAGGGGAAGCACCATTCCCAGTACTGCCATCAAGGAAACCAAGGGTCAACATTAGGCCTGTTTTTCCTGATGATTCTGAAGACATAGAGAATCCTTGTGCCGATTATCTCGCCTTCGACGAATCGGCATGGATGACCCCCAAGAGTCAGTTTAGTTAG 2247 44.64 MAVNFTSNVYAKPNGQTEEAQWRPAGSCPSPLTSFYSSNLSAGFELQTQFLFFHFRMLMNSSSSPIIFFFLILSHFPLLSLSFSPNQNITLSGDAHLRNNAIFLTQELNCLPFSSNSSSSSGFGTAFYINPIRFLDSSTNSTASFSSRFSLSILPTPLCPFADGIAFLITSDSKSFSRSYGYMGLPDPPLNSHYSFVAVEFDTNFDPNLGDINDNHLGLDVNSATSLTSVDFGSRGIVLKNGRQITAWIEYRDDSKTIQVWVGYSQTRPVNPLLVAQVDLSKQFKEFMYVGFSASNGQGSALYIVDRWRFRTFGLIPSLSPVDTINEGNCFMCSSEDSNSSSSRFVDVRKRRKKIGEMTLGLGGLAAFVCSITAIFGLVSFVLIKKLRGRMCRGRAIHRTCQVEMNRVPTRLSLGEIKLATMGFNQNRVVGEGGSATVYKGSLASGGEVAVKRFERGTANNRLCHPFTTEFATMAGCLRHKNLVQLHGWCCEANELVLVYEYLANGSLAKLLHNTSPNSQFVLPWKKRFSVVLGVASALTYLHEECESQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSSITREATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVMLEVASGRRPVNEDGTVLVDWIWDLWEVGKLIEASDSRLMGNYNIVEMERMLMVGLFCVHPNHEKRPTVKEAARILKGEAPFPVLPSRKPRVNIRPVFPDDSEDIENPCADYLAFDESAWMTPKSQFS 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19024253 19027702 - ClCG08G006580.2 Cla08g00674 278329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g00674 748 SUPERFAMILY Concanavalin A-like lectins/glucanases 79 314 IPR013320 -
Cla08g00674 748 PANTHER - 84 714 - -
Cla08g00674 748 Pfam Protein kinase domain 424 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g00674 748 ProSitePatterns Legume lectins beta-chain signature. 197 203 IPR019825 -
Cla08g00674 748 CDD lectin_legume_LecRK_Arcelin_ConA 82 314 IPR001220 GO:0030246
Cla08g00674 748 CDD STKc_IRAK 430 698 - -
Cla08g00674 748 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 84 714 - -
Cla08g00674 748 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524
Cla08g00674 748 Pfam Legume lectin domain 82 312 IPR001220 GO:0030246
Cla08g00674 748 SUPERFAMILY Protein kinase-like (PK-like) 404 696 IPR011009 -
Cla08g00674 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Cla08g00674 748 Gene3D Phosphorylase Kinase; domain 1 389 502 - -
Cla08g00674 748 Gene3D - 78 316 - -
Cla08g00674 748 Gene3D Transferase(Phosphotransferase) domain 1 503 701 - -
Cla08g00674 748 SMART serkin_6 424 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g00674 748 ProSiteProfiles Protein kinase domain profile. 424 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00383 Cla-Chr2:3712679 Cla08g00674 Cla-Chr8:19024253 2.48E-23 dispersed
Cla02g00591 Cla-Chr2:6423447 Cla08g00674 Cla-Chr8:19024253 2.69E-15 dispersed
Cla08g00674 Cla-Chr8:19024253 Cla10g00420 Cla-Chr10:5652017 1.39E-155 dispersed
Cla10g00440 Cla-Chr10:5915204 Cla08g00674 Cla-Chr8:19024253 8.16E-20 dispersed
Cla11g00616 Cla-Chr11:7044424 Cla08g00674 Cla-Chr8:19024253 5.24E-06 dispersed
Cla08g00674 Cla-Chr8:19024253 Cla10g02025 Cla-Chr10:36020308 2.12E-109 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80733 PF00069 Pkinase 1.00E-42 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g00674 - - csv:101206470 1078.54