Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g00707 ATGGATCCCAACAAATTAAACCTAAGTACTTTGGAGCAACAATCCAATTTGGAGATCCAAACAAAGGAATTCGACTACTCGAAACGTGCACAATGGCTACGTGCTGCCGTGCTTGGTGCCAACGACGGGCTCGTCTCGACCGCGTCGCTTATGATGGGAGTTGGAGCTGTGAAACAAGACATCAAGGCCATGATCCTCACCGGTTTTGCCGGGCTAGTTGCGGGGGCGTGTAGTATGGCGATCGGGGAGTTTGTGTCTGTTTACTCTCAATTAGACATTGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGAAGTAGTAATATAGAAGGAGTAGTACAAGGGCAAGAGAGCAAAGATGAAGAAAAATTACCAAATCCACTTCAAGCAGCTGCAGCCTCTGCCTTAGCTTTCTCTCTAGGAGCAATGGTGCCATTATTGGCAGCTTCCTTTATAAGAGAATATAAAGTAAGGCTGGCGGTGGTTGTGGCAGCGGTGACGTTAGCTCTCGTCGTGTTCGGGTGGTTGGGCGCGGTCCTTGGAAAAGCATCACCGATCAAATCGGCCGCTAGAGTGTTGGTCGGAGGTTGGTTAGCTATGGCTATAACGTTTGGCTTGACAAAGCTAATCGGAGCAAGCGGACTCTAG 648 47.84 MDPNKLNLSTLEQQSNLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSSNIEGVVQGQESKDEEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVAAVTLALVVFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19341799 19342446 + ClCG08G006940.1 Cla08g00707 278362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g00707 215 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 18 212 - -
Cla08g00707 215 Pfam VIT family 119 207 IPR008217 GO:0005384|GO:0030026
Cla08g00707 215 Pfam VIT family 33 108 IPR008217 GO:0005384|GO:0030026
Cla08g00707 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 18 212 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g00707 Cla-Chr8:19341799 Cla09g01380 Cla-Chr9:24849392 1.37E-88 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g00707 K22736 - csv:101204048 370.933