Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g00796 ATGGAGGTTTCCGGCAGCGGCGGCGGCGGAGGAAGTTCATCAAGCGAGAAACGGCGTCGTTCGCTCAGAGAAATCACGACCTCCTTCTTCATCGACGTACTAACCGGACCTTGGTTCATGGTGTTCGCTTCATTCCTCGTCATGTCCACCGCCGGAACGCCGTACATGTTCGGACTTTACTCCGGCGCCATAAAATCCGTCCTCGGCTACGATCAGAGCACTCTGAATCTAATCAGTTTTTTCAAAGACCTAGGAACGAACGTCGGCGTAATTTCCGGCCTAATCGCCGAAATTACGCCGCCGTGGGTGGTTCTAGCGATCGGCGCGGCGATGAACTTCGTCGGATACTTCATGATTTGGTTATCGGTGACGGAAAAAGTGGCGGCGCCGTCGGTGTGGCTGATGTGTCTTTACATTTGCTTAGGGGCAAATTCGACGGCGTTTGCGAACACCGGGGCTTTAGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTTTAGGGATTTTGAAAGGATATGTTGGATTAAGCGGAGCAATTTTGACGCAATTCTATCATGCGATTTATGGTGATGATTCGAAATCGTTGATTCTTCTTATTGCTTGGCTTCCGGCGGTTATTTCTGTGGTGTTCTTGAGGACGATTCGGGTTATGAAGGTTCAACATCAGCCTAATGAACTCACAGTTTTCTACAGGTTCTTGTACATTTCTCTTGGCCTAGCCGGATTTCTCATGGTGATGATCGTTCTTCAGCAGAAATTCAAATTCTCCCACATCGAATACAGTTCCAGCGCCGCCGTCGTCGTCTTCCTCCTCTTCTTTCCGATCTTCATCGTCATCGCCGAAGATTACAAATTCTGGCGCAAAAAGCTATCTCAACTCCAAAATCCTTCTCCACTCACCATCATCACTCAAAAACCGCCGCCGTCGCAACAGTTCCCAATCAACCTCGAAACCTCCAACACATCTCCCGCCGGACAACCAAAGCCACAAACGCTATCCTGCTGGAGAACCGCCCTAAATCCGCCGCCAAGAGGCGAAGATTACACGATTCTACAAGCGCTCTTTAGCGCCGACATGCTCCTCCTATTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGCTTCTCTACGGTATCCTAAACAGAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCACCTCAGAAATTTTCCTCACCAAATACAAATTCCCACGAACCCTAATTCTAACCCTAATTCTCCTCCTCTCTTGCGTCGGCCACCTCCTAATCGCCTTCAATCCTCCCGGCGGCCTCTACTTCGCTTCAATCGTCATCGGATTCTGCTACGGTGCTCAATGGCCGATTCTATTCGCCATAATTTCCGAGATCTTCGGCCTCAAATACTACTCGACACTTTACAATTTCGGATCCGCCGCGAGTCCGATCGGGTTGTATTTCGTCAATGTTCGAGTCGCCGGACATTTGTACGACAAGGAGGCCGACCGGCAAATGGCGGCGGCCGGGAGGACGAGGATAGCCGGAGAAGAGTTGAACTGCGTTGGCGTTAATTGCTTTAAAATGTCGTTCATTATAATCACCGGAGTTACTTTGATTGGAGCTCTGTTTTCATTCATTTTGGTTCTTAGAACCAAAGGTTTTTATAAGACTGATATTTATAGGAGGTTTAGGGATGAGGTTAAAGAAGAAGCAGCTGCTGGAAACGACGACGTTTCAAATGATGATAGAAATGTAGAAGGCAACAAGTAA 1821 49.09 MEVSGSGGGGGSSSSEKRRRSLREITTSFFIDVLTGPWFMVFASFLVMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGVISGLIAEITPPWVVLAIGAAMNFVGYFMIWLSVTEKVAAPSVWLMCLYICLGANSTAFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAILTQFYHAIYGDDSKSLILLIAWLPAVISVVFLRTIRVMKVQHQPNELTVFYRFLYISLGLAGFLMVMIVLQQKFKFSHIEYSSSAAVVVFLLFFPIFIVIAEDYKFWRKKLSQLQNPSPLTIITQKPPPSQQFPINLETSNTSPAGQPKPQTLSCWRTALNPPPRGEDYTILQALFSADMLLLFLSTACGVGGTLTAIDNLGQIGASLRYPKQSISTFVSLVSIWNYLGRVVSGFTSEIFLTKYKFPRTLILTLILLLSCVGHLLIAFNPPGGLYFASIVIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSAASPIGLYFVNVRVAGHLYDKEADRQMAAAGRTRIAGEELNCVGVNCFKMSFIIITGVTLIGALFSFILVLRTKGFYKTDIYRRFRDEVKEEAAAGNDDVSNDDRNVEGNK 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20364090 20367678 + ClCG08G007830.1 Cla08g00796 278451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g00796 606 SUPERFAMILY MFS general substrate transporter 40 284 IPR036259 -
Cla08g00796 606 Pfam Nodulin-like 37 282 IPR010658 -
Cla08g00796 606 PANTHER MFS TRANSPORTER 25 591 - -
Cla08g00796 606 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 591 - -
Cla08g00796 606 CDD MFS_Mch1p_like 36 558 - -
Cla08g00796 606 Gene3D MFS general substrate transporter like domains 357 573 IPR036259 -
Cla08g00796 606 Pfam Major Facilitator Superfamily 385 567 IPR011701 GO:0022857|GO:0055085
Cla08g00796 606 SUPERFAMILY MFS general substrate transporter 235 571 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00247 Cla-Chr3:2913026 Cla08g00796 Cla-Chr8:20364090 1.15E-162 dispersed
Cla03g00248 Cla-Chr3:2926500 Cla08g00796 Cla-Chr8:20364090 6.18E-167 dispersed
Cla04g00250 Cla-Chr4:7838083 Cla08g00796 Cla-Chr8:20364090 0 dispersed
Cla08g00796 Cla-Chr8:20364090 Cla10g01901 Cla-Chr10:34901361 0 dispersed
Cla11g00909 Cla-Chr11:15445097 Cla08g00796 Cla-Chr8:20364090 1.97E-96 dispersed
Cla05g02173 Cla-Chr5:33299318 Cla08g00796 Cla-Chr8:20364090 8.56E-10 transposed
Cla10g01898 Cla-Chr10:34867960 Cla08g00796 Cla-Chr8:20364090 9.22E-15 wgd
Cla05g02172 Cla-Chr5:33294586 Cla08g00796 Cla-Chr8:20364090 2.66E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g00796 - - csv:101208506 1011.52