Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g00816 | ATGGTTTCAGAATCTTGGTTTCGTAGTCTGTGGAAGCCTCCAAGGAAGCGCGATTCCACACAGAAGGTTGTAATCGGAGTATTAGCTTTTGAAATTGCTAGCTTGATGTCCAAGTTGGTTCATCTATGGCAGTCTTTGAGTGATAAGCAAGTCGGGAGGTTGAGAGAAGAGATAAACAATTCGTTGGGCATTAAGAAGCTTGTGTCAGATGACGATGAATATATTGTACGTTTGATATGTGCAGAGATGACAGAAAGTTTAGCTCATGTGGCTAAATCTGTTGCCAGGCTTGGAAAGAAATGCAGTGATCCTAGTTTAAAAAATTTCGAGCATGTTTTTGATGCTTTGATTCAAATTGGTGCTGATCCCTATGGTTGGATATACTCATGGAAGAAGATGGAAAAGAAAGTGAAGAAGATGGAGACCTTTATTTCAGTCAATGCAAATTTGTATCAGGAAATGGAGATGCTTGCAGATCTTGAGCAAACTTTAAGGAGGATGAAGGTTAATGACGACTCGGATGTTATAACCCTAGTCGAGTTTCAAAAGAAGGTTGCATGGAAGCAGCAGGAGGTGAAAAATTTGCGAGAGATGTCACTTTGGAAAAGGACCTATGATTACACAATTCTTCTTCTAGCTAGATCGCTATTCACCATATTCAGTAGGATCAAACATGTATTTGAAATTGAGCAGAGCATGGATGACGGATCAAATGATTCACGAGATATGAGTTCTGACTATATTGCACGTAGTCAATCAGTGTCTTCATTAATGCAATCCATGGTCCATCCCTCTGAGAATGGTCTTACTAAATTTGCTTCGGGTCCCCTTAAGAGGTTTACAACTAAATCAGGGCCAATTTCAAAAACAGCTAAACCCAATAGTTTTTATTCAGGTCCTCTTGGTGGCTCTATTACGAAGTCAGGTCCTATTTCAGGCCCTGTTTCCGGAACCAATAGAAACTTCAACTCTTATTCAGGTCCTCTCACAAGTTCAACAATAAGATCAGGTCCAATTTCTGGAATAGACAATAAAACCAATCAGAAGAATTGGCTTGTCGGTGGCTACTCTTCACTATTTAATGGGAAGAAATCTCATCAGAAGCCAAACAGACTGACTCAAGTTGGACCTTTTAAAGGATGCATGATATCTGGCCCTAGTTCTATGGTTGTCAATTGCCACATTAGTTCAAATGGGTATCATTCTGAGATTGTTGATCCTTGCAACAGAGCCAATCCTTACAAACAATTGCTTAGCGCTAAGTGTCGATTGTTGGATGCCCCACCTGAGACTCTTGGTGGTGCTGCTTTGGCACTGCACTATGCAAATGTCATTATTGTAATTGAGAAGCTTGCTGCATCTCCTCATTTGATTGGCCTGGATGCTAGAGATGATCTATACAATATGCTTCCAGCTAAAGTTCGAGCTAGCCTTAGGGCGGCCCTAAAGCCATATGCCAAAAGCTTGGCTTCATCTGCGTATGACACAGGTCTTGCAGGAGAGTGGAATGAGGCAATAGCTGGGATATTAGAATGGCTTGCTCCACTGGCTCATAACATGGTTAGATGGCAATCTGAACGTAGTTTTGAACAACAGAATTTTGTTTCCAGGACCAATATGCTTCTTGTACAAACTCTTTTCTTTGCAAATCAAGAAAAGACCGAAGCAATCATTACCGAACTTCTTGTTGGTCTGAATTACCTATGGAGGTTTGCACAGTCCTCCAACGACAGGAGGCCTCCTCAGCTCTACAAGACCGATATCGACCAATTTGAAGCGGCACGATGGAGAGAGAGAGAGAGAGAGCTGTCGCTACTCAGTTGCATTATCGATACTCAAATACCAGAAGTCACTATTGACGAGTTAGTCGGTTCGCCGCAAATGGCAACGCCGAAGCCTCGCACCACTCGGTCCAGGTCTCACAGGGATATTCCGGATTTGGAGAAGATGGACGCTGCTTACAGTTGGGACGCCCTTGAATGGACCAAGATTGAGCCTGTTCCGCGGTCGGTTTCGCGTGTCAACTTGGATTGCTTGCTTGAAGCGGAACAAGTGATTGCTGAGGGCTATGGTGTTGTTCTTGTGAATACTGATGAGGCGGGTACCTTGTTTGTAACCAATTTTCGTCTTCTATTTCTAAGTGAAGGAACCATGGACGTTATTGCCCTTGGGACTATACCACTGGCTACAATTGATAAATTCAACAAAATAGTTGTGAAGACAAATTCTGTCTCTCGCCAATCCGAAAAGTCTTCACCATCTAGGCGACTTCTTCAGGTCATTGGAAAAGACATGAGAATTATCGTCTTTGGTTTTCGTCCAAGAACAAAACAGAGGCGCAAAGTATATGATGCATTATTGAGGTGTATGAAGCCTGCAAGAATATGGGATCTATATGCATTCCAATCCGGGCCATCCAATGATGAAGAGATGTTGCAGGCTTCTACCTTTCGTGCTAGATGCCGTTTGCCTGTTGTTTCGTGGTGCAATCCTGGCACTGGAGCTGTTCTTGCACGTTCATCTCAACCTTTAGTTGGTCTTATGATGAATATGAGAAGTAATACCGATGAAAAGCTTGTTGCTGCCCTTTGCTCGAATCTTGCTGGTGGTCAAGGGTTATCACGTAGGAAGCTTTATATAGCTGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCCATGGGAGGTGGCTCAGAGTCTTCATCAAATTATTTTCAATCTGAGATAGTCTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTGACTCGGCTGAGAGAGTACTTGGATACTCATGGTGAAAAATCATCTGATGGAATGTCATCATTCTTGAGACATGGTGGATGGACTTGGGGTGGGGGTAATCTTAGTAGCATGTCTGCATCTGTATCAACTCTGGGAGATAGTGGCTGGTTAATCCATGTTCAAAGTGTCTTGGCTGGTTCAGCATGGATTGCTGCACGTGTTGCTTTGGAAAATGCAACGGTGCTAGTTCATTGCAGTGACGGCTGGGACAGAACAACACAACTAGTTTCACTTGCTAGCTTACTGCTTGATCCATATTATCGGACGTTTGCTGGATTTCAGGCACTGGTTGAAAAGGATTGGCTAGCATTTGGTCATCCTTTCTCAGATCGGTCTGGCATGCCGACCATATCAGGAAGTGGTAACATGCCATATGAACTATCTAGGCAGTCTTCAACTGGAAGTTTTTCTTCTTCACCTTTGCGTCAGCCATCAGGTGCATTCATATCTCAAGCTTCCAGTCCTCCTCATGCTCAAACATCAAACAACTGTTCTCCCATATTTTTACAGTGGGTTGATTGTGTTTCACAACTTCTGCGCATGTATCCCTTTGCGTTTGAGTTCTCTTCAGCATTCCTTGTGGATTTGTTGGATTGTATGCTTTCCTGTCGCTTTGGGAACTTCTTATGCAATTGTGAGAAGGAGCGGCAGCAATGTGCAGTTTCTGAAGTTTGCGGCTGTCTATGGGCGTATTTAGCTGATTTACGAGCCTCAGAAGGAAGTACGCATGTGCATCATAACCTCTTTTATGATCCTACCAAACATGAAGGTCCTCTCTTACCTCCTGCAGCATCTCTAGCTCCAACTCTCTGGCCACAATTCCATCTTCGTTGGGCTTGTCCAAAAGAATCCCAAGCTGGGGAACTTGAAGTCAAATGCAGGAAAATGGCTATAAAATTCTCTGAAATGCAGAAGGACAAAGAAATAGCTGAGAGAAAAGCCCAGGAGATGACGGCTGCCATGGAATCATTAAAATCCGAGTTGCAAAGCGAGAAACAGTTAAGTATATCTGCTAGGAATGCTGCAAAAAGTGCAAGCAAAGAATGCGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGTTGCAAGGTTCAAGTCTCTAGTAATGGTTATTGTACTGTTGATATTGAGGGCGACCTGATGAAAAAATCCAACCAGAAAAGTCATCCTGCTTCAAGAAGGACTTCACATCGTTCGCTGCCACGCCCTAGTGAAGAGAATGACCTCTCGCTTTCTATCACAGTTACAGCAGATGATGTGCCAAGTAACCCCCTCAGTCACATCTGTGAAGCTCTTTGCCCATTACGCACTCGGGATGGAGGGTGCCGATGGCCTGATGCTGGTTGTGCTCATTTGGGTAGCCAATTTATTGGACTGAAGGCAAATTTCGACGCATTCGATCAACTATCCATATATGATGGTTATTTCAAGCCAGAGTGA | 4251 | 43.43 | MVSESWFRSLWKPPRKRDSTQKVVIGVLAFEIASLMSKLVHLWQSLSDKQVGRLREEINNSLGIKKLVSDDDEYIVRLICAEMTESLAHVAKSVARLGKKCSDPSLKNFEHVFDALIQIGADPYGWIYSWKKMEKKVKKMETFISVNANLYQEMEMLADLEQTLRRMKVNDDSDVITLVEFQKKVAWKQQEVKNLREMSLWKRTYDYTILLLARSLFTIFSRIKHVFEIEQSMDDGSNDSRDMSSDYIARSQSVSSLMQSMVHPSENGLTKFASGPLKRFTTKSGPISKTAKPNSFYSGPLGGSITKSGPISGPVSGTNRNFNSYSGPLTSSTIRSGPISGIDNKTNQKNWLVGGYSSLFNGKKSHQKPNRLTQVGPFKGCMISGPSSMVVNCHISSNGYHSEIVDPCNRANPYKQLLSAKCRLLDAPPETLGGAALALHYANVIIVIEKLAASPHLIGLDARDDLYNMLPAKVRASLRAALKPYAKSLASSAYDTGLAGEWNEAIAGILEWLAPLAHNMVRWQSERSFEQQNFVSRTNMLLVQTLFFANQEKTEAIITELLVGLNYLWRFAQSSNDRRPPQLYKTDIDQFEAARWRERERELSLLSCIIDTQIPEVTIDELVGSPQMATPKPRTTRSRSHRDIPDLEKMDAAYSWDALEWTKIEPVPRSVSRVNLDCLLEAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVIALGTIPLATIDKFNKIVVKTNSVSRQSEKSSPSRRLLQVIGKDMRIIVFGFRPRTKQRRKVYDALLRCMKPARIWDLYAFQSGPSNDEEMLQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSNLAGGQGLSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTRLREYLDTHGEKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALENATVLVHCSDGWDRTTQLVSLASLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRSGMPTISGSGNMPYELSRQSSTGSFSSSPLRQPSGAFISQASSPPHAQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDCMLSCRFGNFLCNCEKERQQCAVSEVCGCLWAYLADLRASEGSTHVHHNLFYDPTKHEGPLLPPAASLAPTLWPQFHLRWACPKESQAGELEVKCRKMAIKFSEMQKDKEIAERKAQEMTAAMESLKSELQSEKQLSISARNAAKSASKECEAIKRAIQSLGCKVQVSSNGYCTVDIEGDLMKKSNQKSHPASRRTSHRSLPRPSEENDLSLSITVTADDVPSNPLSHICEALCPLRTRDGGCRWPDAGCAHLGSQFIGLKANFDAFDQLSIYDGYFKPE | 1416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20549716 | 20569578 | - | ClCG08G008030.2 | Cla08g00816 | 278471 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g00816 | 1416 | Coils | Coil | 1238 | 1272 | - | - | |
Cla08g00816 | 1416 | PANTHER | PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 | 646 | 803 | - | - | |
Cla08g00816 | 1416 | Gene3D | - | 690 | 790 | IPR011993 | - | |
Cla08g00816 | 1416 | PANTHER | MYOTUBULARIN-RELATED | 646 | 803 | IPR030564 | - | |
Cla08g00816 | 1416 | PANTHER | MYOTUBULARIN-RELATED | 807 | 1415 | IPR030564 | - | |
Cla08g00816 | 1416 | Coils | Coil | 178 | 198 | - | - | |
Cla08g00816 | 1416 | Pfam | Domain of unknown function (DUF3475) | 27 | 83 | IPR021864 | GO:0045927 | |
Cla08g00816 | 1416 | Pfam | Myotubularin-like phosphatase domain | 807 | 1155 | IPR010569 | - | |
Cla08g00816 | 1416 | Pfam | Protein of unknown function (DUF668) | 431 | 522 | IPR007700 | GO:0045927 | |
Cla08g00816 | 1416 | ProSiteProfiles | Myotubularin phosphatase domain. | 808 | 1213 | IPR010569 | - | |
Cla08g00816 | 1416 | PANTHER | PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 | 807 | 1415 | - | - | |
Cla08g00816 | 1416 | SUPERFAMILY | PH domain-like | 678 | 802 | - | - | |
Cla08g00816 | 1416 | CDD | PTP-MTM-like | 821 | 1115 | - | - | |
Cla08g00816 | 1416 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 806 | 1217 | IPR029021 | - | |
Cla08g00816 | 1416 | MobiDBLite | consensus disorder prediction | 1320 | 1345 | - | - | |
Cla08g00816 | 1416 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 1001 | 1011 | IPR016130 | GO:0016311|GO:0016791 | |
Cla08g00816 | 1416 | SMART | gram2001c | 670 | 738 | IPR004182 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g00816 | Cla-Chr8:20549716 | Cla09g00971 | Cla-Chr9:10206646 | 5.23E-13 | dispersed | |
Cla05g00812 | Cla-Chr5:7944866 | Cla08g00816 | Cla-Chr8:20549716 | 6.45E-43 | transposed | |
Cla10g01850 | Cla-Chr10:34422637 | Cla08g00816 | Cla-Chr8:20549716 | 4.50E-40 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g00816 | K18081 | - | csv:101204839 | 1175.61 |