Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g00822 ATGGCGTCTTCTTCTTCTTTCTCCGATCAATACCTCCAACTTTTCTTTTCACTTTTGGCCTTCGCTCTCTCTGCATTCATTTTCTTCCTCGCTCAAAAACGCACCTCGAAACCACGATTCAACCTCCCGCCGGGACCCCGCGGCTGGCCCGTCGTCGGAAACCTCTTCCAGGTCGCTCGCTCCGGCAAGCATTTCTTCGAATACATTGAAGACATCCGCCAGATTTACGGCCCAATCTTTACTCTCCAGATGGGCTCTCGCACCATGATCATCTTGTCCGGCGCCGACCTCATTCACGAAGCCTTAATCAAGCGCGGCCCTACTTTCGCTAGCCGCCCCGCCGAGAATCCCACTCGAATCATCTTCAGCAGCAACAAATTCTCCGTTAACGCCGCCGCCTACGGCTCCCTCTGGCGCTCCCTCCGCCGAAACATGGTCGAAAACATGCTCTCTTCTACCCGCTTGAAGGAGTTCCGCGATGTCAGAAAGAACGCCATGGATAAGCTTGTTCAACGCATTCGAACCGACGCCGCTGCCAACGGCGGCGCCGTTTGGGTGTTGAAGAATGCTCGATTCGCTGTGTTCTGTATTCTCTTAGCGATGTGCTTCGGATTAGAAATGGATGAGGAATCGGTTGAGAAAATGGATCAAGTTCTTAAAACTGTTCTGATCACCGTCGATCCGAGAATCGACGATTTTCTCCCGATTTTGAGGCCATTTTTCTCCAAACAGAGGAAACGCGCCATGGAAGTAAGAACGGAGCAAATCGAATTCGTCGTACAGTTCATCAATCGAAGGAAGAAAGCACTTCAAAATCCAGGTTCAGACATTACCGCAACTTCATTTTCGTACCTCGATACGCTCTTCGATCTCAAGGTCGACGGCCGGAAATCTTCCCCGACAGACGCCGAATTAGTCACTCTCTGTTCCGAATTCCTCAACGGCGGCACCGACACGACGGCGACAGCCATCGAATGGGGAATAGCAGAGCTAATCACAAACCCTAACATCCAGAAAAAACTACACGAAGAAATCAAGCAATTAGTAGGCGATAGAAAAGTAGACGAATCTGATATTGAGAAATTGCCTTATCTTCAAGCGGTAGTGAAGGAATTGCTGAGAAGGCATCCGCCGACGTACTTTTCGCTGACACATTCGGCGATCGAGGCGACAAAATTGGCCGGATACGACATTCCGATGGAGGCGAATGTGGAGGTTTATTTGGCCGGAATCAGCAACGATCCGAAACTGTGGAAGAATCCGGAGAAATTCGAGCCAGAGAGATTCATGTCCGGCGAGGAAGAGGTGGATATGACGGGGATTAAAGGAATGAAAATGATTCCGTTCGGAGTTGGGCGGAGAATTTGCCCTGGTTTGGGAATGGCGACGATTCACGTTCATCTGATGTTGGCGAGGTTGGTTCAGGAATTTGAATGGAGTTCATATCCGCCGAACAGTAAATTAGATTTTACGAAGAAGTATGAATTTACTGTTGTGATGAAGAATTCTCTCAGAGCCATTGCCACAGCCAGAGCTTGA 1539 49.51 MASSSSFSDQYLQLFFSLLAFALSAFIFFLAQKRTSKPRFNLPPGPRGWPVVGNLFQVARSGKHFFEYIEDIRQIYGPIFTLQMGSRTMIILSGADLIHEALIKRGPTFASRPAENPTRIIFSSNKFSVNAAAYGSLWRSLRRNMVENMLSSTRLKEFRDVRKNAMDKLVQRIRTDAAANGGAVWVLKNARFAVFCILLAMCFGLEMDEESVEKMDQVLKTVLITVDPRIDDFLPILRPFFSKQRKRAMEVRTEQIEFVVQFINRRKKALQNPGSDITATSFSYLDTLFDLKVDGRKSSPTDAELVTLCSEFLNGGTDTTATAIEWGIAELITNPNIQKKLHEEIKQLVGDRKVDESDIEKLPYLQAVVKELLRRHPPTYFSLTHSAIEATKLAGYDIPMEANVEVYLAGISNDPKLWKNPEKFEPERFMSGEEEVDMTGIKGMKMIPFGVGRRICPGLGMATIHVHLMLARLVQEFEWSSYPPNSKLDFTKKYEFTVVMKNSLRAIATARA 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20641581 20643119 + ClCG08G008110.1 Cla08g00822 278477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g00822 512 SUPERFAMILY Cytochrome P450 43 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 Pfam Cytochrome P450 43 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PANTHER CYTOCHROME P450 77A4 6 509 - -
Cla08g00822 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla08g00822 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cla08g00822 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 6 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g00822 Cla-Chr8:20641581 Cla09g01651 Cla-Chr9:33018725 1.82E-117 dispersed
Cla01g00073 Cla-Chr1:606948 Cla08g00822 Cla-Chr8:20641581 2.56E-112 transposed
Cla01g02154 Cla-Chr1:35685221 Cla08g00822 Cla-Chr8:20641581 7.41E-158 transposed
Cla02g00754 Cla-Chr2:9404549 Cla08g00822 Cla-Chr8:20641581 4.07E-92 transposed
Cla02g01859 Cla-Chr2:33759526 Cla08g00822 Cla-Chr8:20641581 1.63E-72 transposed
Cla05g02200 Cla-Chr5:33704012 Cla08g00822 Cla-Chr8:20641581 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g00822 K21995 - csv:101206763 917.531