Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g00858 | ATGGCGTCAGAGCGGCCGCTACTGATTATATCTCCAAAAACACCCAAGACTGTTTCTCACGATCTACAGAAACAGGAGTTGAACCAACCTGGATTGTTCTTCGCCATGGATTCTCGAAGCCCTAATGAGAATTCACCAAGTACGGAAATGAGTTATCGCTCATTCTCGCGGCGAAGTCAATCATCGCTGCAATCGAAGTCCTCAATTCGTGAAGTGGGTTCTAGTGATTTTGGATCGAGGCCTGTTCGTCATGGTTCTCGAGGTGCTGATTCTGAAGCATTGAGCATATCCCAGAAGGAGATCAGTGATGAAGATGCGAGGTTAATTTACATCGATGATCCCGAAAAGACAAACGAGAAGTTTGAATTCGCTAGAAATTCGATTCGCACCGGCAAGTATTCGATTCTTACTTTTCTGCCCAGGAATCTATTTGAACAATTTCATAGAATTGCTTATATATATTTCCTTGTTATTGCGGTTCTCAATCAACTTCCCCAGCTTGCTGTTTTTGGTCGGGGAGTTTCCATTTTGCCTTTAGCTTTTGTGCTGCTAGTTACTGCATTTAAAGATGCATATGAGGATTGGAGAAGGCATCGTTCTGATAAAATTGAGAACAATAGATTAGCTTCAGTTTTGGTAGATGGTCAGTTTCAACCCAAGAAATGGAAGAATATTAGAGTTGGTGAGATAATTAAGATTGGTGCAAATGACACCATTCCTTGTGATATGGTGCTTCTTTCTACCAGTGATTCCACAGGGGTTGCATATGTGCAAACTCTGAATTTGGATGGGGAATCAAATTTGAAAACCCGGTATGCAAAACAGGAGACGATGTCTAAAATGCCCGACAAGGAGAAGATTGTTGGGTTGATTAAATGTGAGAAACCCAATAGGAATATTTATGGATTTCATGCTAATATGGAGATTGATGGGAAACGTCTTTCTCTTGGACCTCCGAACATAGTTCTTCGTGGCTGTGAGCTCAAGAATACCAGTTGGGCTGTTGGTGTTGCTGTCTATGCTGGCCGTGAGACGAAAGCCATGCTTAACAGTTCTGGAGCTCCATCAAAAAGAAGTCGACTCGAGACTCGCATGAATGTGGAGATTGTTATGCTCTCTCTCTTTCTTGTTGCTTTGTGTACCGTTGTTTGTGTTTTGGCTGCTGTTTGGTTCATCAGAAACAGGGAAGATTTGGACATTTTACCTTATTTCAGAAATAAGGACTTCTCAGAGGACCCACCTGAAACCTATAATTACTATGGATGGGGATTGGAGGCATTTTTTGTGTTCCTCATGTCGGTTATTGTGTTCCAGATCATGATCCCCATTTCACTATACATTTCAATGGAGGTTGTTCGTATTGGCCAGGCTTATTTCATGATCCGAGACACCCAAATGTATGACGAAACATCAAATTCAAGATTTCAGTGTCGGGCTTTGAACATAAATGAGGATTTAGGACAAATAAAGTATGTGTTTTCGGACAAAACAGGTACCCTTACCGAGAATAAGATGGAATTTCGATGTGCAAGCATATGGGGGGTCGATTATGGAGGTGAAAGTACCAATCCCCTCGACGAGCAGATTGGATACTCTGTTCGAGTGAATGGAAAGGTTTTGAGACCGAAATTGGTTGTCAAAACTGATCCTGAGCTTCTACACTTATCGAGAAGTGGAAAACACACCAAGGATGGAAGATACATTCATGATTTCTTCCTCGCATTAGCTGCTTGCAATACCATCGTTCCTCTCATTACCGAAACTTCTGATCCTTCAGTGCGATTAATTGACTACCAAGGGGAGTCTCCAGATGAACAGGCATTGGTTTATGCTGCAGCAGCATATGGTTTTATGCTAATTGAACGAACTTCTGGCCATATAGTTATTGACATACATGGTGAAAAACAAAGGTATAATGTTTTGGGAATGCACGAGTTTGATAGTGACAGGAAGAGGATGTCGGTGATACTGGGGTGTCCTGATATGACCTTTAAAGTATTTGTAAAAGGTGCTGATAACTCCATGCTCAAGGTGATGGGTGAAAATCTGAACATGGATATCATTCAATCGACTAAAGCTCATCTTTATTCATATTCATCAAAGGGTCTCAGAACACTCGTTATTGGGATGAAAGAACTCAGTTCCTCCGACTTTGATAAATGGCACATGATGTTTGAGGAAGCAAGTACCGCTTTGATCGGTAGGGCTGCTAAGCTTCGCAAGGTTGCCAGCTGTATTGAAAACAATTTGTTCATATTAGGTGCCTCAGGCATTGAGGATAAGTTACAAAAAGGTGTGCCAGAAGCCATAGAAGCTTTAAGAACCGCGGGAATTAAAGTATGGGTTTTGACTGGAGACAAGCAAGAAACTGCCATATCTATAGGTTACTCCTCAAAGCTCTTGACAAACAAGATGACCCAAATTATAATTAACAGCAACTCGGCAGAATCATGCAAAAGGAAATTAGAAGATGCAATAATCATGACGAAGAAGCTTGCTACTGCCTCAGGCGTTGCACTGGATAATGAAAGAAGCACTGAAGTTGTAACAACTTCGGTTGCGTTGATCATTGATGGCAGCAGCCTCGTTCATATTCTTGACAGTGAACTGGAAGAACAGGTAAATGCTTATAAACCTGCAAATTCTATGTACTATGGAATGTCCAACGCTTACCTAGCTCTTGTATTTCAGCTTTTCCAACTATCTTGTAACTGTTCGGTGGTGTTATGTTGTCGAGTCGCCCCATTGCAAAAGGCTGGCATTGTTGCTCTTGTGAAGCGAAGGACTTCTGACATGACACTTGCCATTGGTGATGGTGCAAATGACGTGTCAATGATCCAAAAGGCAGATGTGGGTGTTGGCATCAGTGGTTTAGAGGGTCGACAAGCTGTTATGGCATCGGATTTTGCCATGGGACAATTTAGATTCTTGGTTCCTCTTCTATTGGTCCATGGACATTGGAATTACCAGCGGATGGGCTACATGATCTTGTACAACTTTTACAGAAATGCGGTATTTGTTCTTGTTCTATTCTGGTATGTGCTCTTTACCGGTTACTCGTTGACAACGGCGATCAACCAATGGAGTAGTGTGCTTTACTCAATAATCTATACTTGTTTGCCCACTATTGTTGTTGGAATTCTTGACAAGGACTTGGGAAGAAGGACTCTTCTTAGTTACCCTCAACTCTATGGGGCTGGCCATAGACAGGAAAGCTACAATTCAAAATTGTTTTGGTTAACAATGATTGACACTGTGTGGCAAAGCATTGCTATTTTCTTCATCCCCCTCCTTGCATTTTGGGCTACCACTGTCGACATTTCAGGCCTCGGAGATCTGTGGCTACTCGCCACAGTCATTGTTGTCAACTTACATTTATCAATGGACGTGGTTCGATGGTATACTGTCACTCATGCTGTGATCTGGGGATCCACTGTCGCAACTGTCATTTGTGTCATTGTTCTTGATTCGATATTGTCGCTTCCTGGTTACTGGGCAATATATCATGTGGCGGGCACAGCATCTTTTTGGCTATGTTTGTTATCTATTGTCGTAGTAGCATTACTTCCTCGTTTCGTCGTAAAATACCTTTATCAGTCTTACTGTCCATGTGACATCCAAATAGCAAGAGAGGCTGATAAGTTTGGATGGACAAGAGAGCTGGGAGTTGTACAAACAGAGATGAGCCCAGTCCTCAACAATCCTTCACAAATCAATTCTTCATCACCTCTAAGAAAATCAATGGCGAACGGACTAATGAAGCTGACCCGCTTCGCCTCTCGCTCTTCTCTCCTTCCCCGTCAATGGCACCAGCCCTCTTCATTTTCTCGTCTCGGTGCTCAGGAATTTCTCCAGACAGCTGAGGTGATGAGCGGAAGTGAGATGAATGTCTCTAAAAGAGTTGCTGTAACTACCCTTGACGAGGCGAAGAGGGCCTTACCAGATACTTATGCTACTGTAAGAGAGTTGCTTACTCCACTGAAGTCTGGCATTGCCAAACGATCTGCTGTGTATGTATGCGATATTCCTAAGGCTGCACTTGGAGCTAATGGTAAGGCTGTTTTATCTAGATGGCAGGATGCAAGGGCATCTGTTGTCAAATTTTCAACATTAGGTGTCACCAGTAGATGTGATATGAGTGCCAGAGGGCCGTGCTTTGCGAGGTTTATGTCATCAAAATCTTCAGAGAAACATGGACAAACTGCATCTGAGAGCAAAAAAGAAATATCAACAGTGGAGGATCCATTTGATGCTCCTACATATAATATACCAGAGAAGCCTGTTACATTTGCAGAGGGAGCTTCCTACAGTTTTATCATCCTTGCAGGGCTTGGAGTTGCAGCTGCTGCTGGATACGCAGTTTTTAAGGAGCTTATATTTCAACCAAAAGAGTACAAGATCTTTGACAAGGCTCTTAAAAGGATTCAAGATGACAGCCAGGTTAGGGTAAGGATTGGTTCCCCTATAACCGGTTATGGGCAAGAAACTAGAAATCGAGCTGCTCGCCAACGTATCCCTAATAGGGTATGGACTGACGAAGATGGTGTAGAGCGAGTAGAGGTGAATTTTTATATCCGTGGGCCCCATGGAGCTGGGAAAGTTTATACTGAGATGTTCAAGGATCAAGTCGACAAGCAGTGGAAGTTCACATACTTGATTGTCGAGGTGAAATCGCCTTCTCCGGCCCAATTGATCCTAGAATCTTATATGCCTGCCTGA | 4719 | 42.78 | MASERPLLIISPKTPKTVSHDLQKQELNQPGLFFAMDSRSPNENSPSTEMSYRSFSRRSQSSLQSKSSIREVGSSDFGSRPVRHGSRGADSEALSISQKEISDEDARLIYIDDPEKTNEKFEFARNSIRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLLVTAFKDAYEDWRRHRSDKIENNRLASVLVDGQFQPKKWKNIRVGEIIKIGANDTIPCDMVLLSTSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANMEIDGKRLSLGPPNIVLRGCELKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNVEIVMLSLFLVALCTVVCVLAAVWFIRNREDLDILPYFRNKDFSEDPPETYNYYGWGLEAFFVFLMSVIVFQIMIPISLYISMEVVRIGQAYFMIRDTQMYDETSNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESTNPLDEQIGYSVRVNGKVLRPKLVVKTDPELLHLSRSGKHTKDGRYIHDFFLALAACNTIVPLITETSDPSVRLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGEKQRYNVLGMHEFDSDRKRMSVILGCPDMTFKVFVKGADNSMLKVMGENLNMDIIQSTKAHLYSYSSKGLRTLVIGMKELSSSDFDKWHMMFEEASTALIGRAAKLRKVASCIENNLFILGASGIEDKLQKGVPEAIEALRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSAESCKRKLEDAIIMTKKLATASGVALDNERSTEVVTTSVALIIDGSSLVHILDSELEEQVNAYKPANSMYYGMSNAYLALVFQLFQLSCNCSVVLCCRVAPLQKAGIVALVKRRTSDMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTGYSLTTAINQWSSVLYSIIYTCLPTIVVGILDKDLGRRTLLSYPQLYGAGHRQESYNSKLFWLTMIDTVWQSIAIFFIPLLAFWATTVDISGLGDLWLLATVIVVNLHLSMDVVRWYTVTHAVIWGSTVATVICVIVLDSILSLPGYWAIYHVAGTASFWLCLLSIVVVALLPRFVVKYLYQSYCPCDIQIAREADKFGWTRELGVVQTEMSPVLNNPSQINSSSPLRKSMANGLMKLTRFASRSSLLPRQWHQPSSFSRLGAQEFLQTAEVMSGSEMNVSKRVAVTTLDEAKRALPDTYATVRELLTPLKSGIAKRSAVYVCDIPKAALGANGKAVLSRWQDARASVVKFSTLGVTSRCDMSARGPCFARFMSSKSSEKHGQTASESKKEISTVEDPFDAPTYNIPEKPVTFAEGASYSFIILAGLGVAAAAGYAVFKELIFQPKEYKIFDKALKRIQDDSQVRVRIGSPITGYGQETRNRAARQRIPNRVWTDEDGVERVEVNFYIRGPHGAGKVYTEMFKDQVDKQWKFTYLIVEVKSPSPAQLILESYMPA | 1572 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20979650 | 20993609 | - | ClCG08G008500.2 | Cla08g00858 | 278513 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g00858 | 1572 | CDD | P-type_ATPase_APLT_Dnf-like | 125 | 1096 | - | - | |
Cla08g00858 | 1572 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 6 | 1236 | - | - | |
Cla08g00858 | 1572 | Pfam | Cation transport ATPase (P-type) | 602 | 677 | - | - | |
Cla08g00858 | 1572 | Gene3D | - | 596 | 729 | IPR023299 | GO:0000166 | |
Cla08g00858 | 1572 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 495 | 501 | IPR018303 | - | |
Cla08g00858 | 1572 | SFLD | p-type atpase | 477 | 987 | IPR044492 | - | |
Cla08g00858 | 1572 | Pfam | E1-E2 ATPase | 209 | 451 | - | - | |
Cla08g00858 | 1572 | Pfam | TIM21 | 1432 | 1558 | IPR013261 | GO:0005744|GO:0030150 | |
Cla08g00858 | 1572 | Gene3D | Mitochondrial import inner membrane translocase subunit Tim21 | 1463 | 1570 | IPR038552 | - | |
Cla08g00858 | 1572 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cla08g00858 | 1572 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 964 | 1203 | IPR032630 | - | |
Cla08g00858 | 1572 | SUPERFAMILY | HAD-like | 480 | 977 | IPR036412 | - | |
Cla08g00858 | 1572 | MobiDBLite | consensus disorder prediction | 38 | 74 | - | - | |
Cla08g00858 | 1572 | SFLD | Haloacid Dehalogenase | 477 | 987 | - | - | |
Cla08g00858 | 1572 | Pfam | Phospholipid-translocating ATPase N-terminal | 109 | 174 | IPR032631 | - | |
Cla08g00858 | 1572 | Gene3D | - | 179 | 350 | - | - | |
Cla08g00858 | 1572 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 6 | 1236 | - | - | |
Cla08g00858 | 1572 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 425 | 514 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g00858 | 1572 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 906 | 1019 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla08g00858 | 1572 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 123 | 873 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Cla08g00858 | 1572 | MobiDBLite | consensus disorder prediction | 34 | 96 | - | - | |
Cla08g00858 | 1572 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 499 | 766 | IPR023299 | GO:0000166 | |
Cla08g00858 | 1572 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 122 | 1202 | IPR023298 | - | |
Cla08g00858 | 1572 | SUPERFAMILY | Calcium ATPase, transduction domain A | 206 | 347 | IPR008250 | - | |
Cla08g00858 | 1572 | PRINTS | P-type cation-transporting ATPase superfamily signature | 493 | 507 | - | - | |
Cla08g00858 | 1572 | PRINTS | P-type cation-transporting ATPase superfamily signature | 936 | 955 | - | - | |
Cla08g00858 | 1572 | Gene3D | - | 749 | 976 | IPR023214 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00239 | Cla-Chr7:2643070 | Cla08g00858 | Cla-Chr8:20979650 | 5.86E-173 | dispersed | |
Cla08g00858 | Cla-Chr8:20979650 | Cla09g00071 | Cla-Chr9:677972 | 0 | dispersed | |
Cla08g00858 | Cla-Chr8:20979650 | Cla04g00644 | Cla-Chr4:20843465 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g00858 | K14802 | - | csv:101212953 | 2244.93 |