Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g00864 | ATGGGGATTCAAACTATGGGGTCTCAGGCCGGAGGTGATCCAAATGGCAAACAATCACAATTCCAGCCATTGGTTCGTCAAAATTCACTGTATAGTCTCACACTGGATGAGGTTCAAAATCAGTTGGGTGATCTAGGAAAGCCTTTAATCAGCATGAACCTTGATGAGCTTCTTAAAAATGTGTGGACTGCTGAGGCCAACCAAACTGTTGGTAAAGACAATGAGGACAATAATGTCTTGGCCAATCAAACATCCCTACAACGTCAGGCTAGTCTTTCATTGAATGGTGCTCTGAGTAAAAAGACTGTCGATGAGGTGTGGAGAGACATTCAACAAAGCAAAGACAGTGAGGAGAAGAAGTCTCGTGAACGGCAACCTACGTTGGGAGAGATGACATTGGAAGATTTTCTGGTGAAAGCAGGGGTGGTTGCTGAGACATCGTCGAATAAAAAAGGTGCGGGTCCTGTTGTTGAAATTGACGCAAATATCACACCCCAGTTTCAACAAACGCAGTGGATGCCGTACCCTCAACCTCAGTATCAGTCTCAACAAGCAGCAATGATGGGGGTTTACATGTCAGGCCAGCCTATTCCCCAGCCACTGCATGTGGGAGGTGGTGCTGTGATGGATGTTCCATATGTAGACAACCAGTTGGCATTGCCAACTCCTTTGATGGGAGCTTTATCTGATACACAGACATCTGGAAGAAAAAGGGGAGCGCCTGAAGACATGATTGAGAAAACTGTCGAGCGTAGACAGAAGAGGATGATAAAGAATCGGGAATCTGCCGCTCGTTCACGAGCAAGGAAGCAGGCATATACCAATGAACTGGAGAATAAAGTTTCACGTTTGGAAGAGGAGAATGAAAGGCTCAGGAAACGGAAGGAGCTGGAAAAGATGCTACCGTTGGCTCCCTCTCCTGAGCCGAAGTATCAGCTTCGAAGAACTTCGTCAGCGCCGTTCTAA | 966 | 46.58 | MGIQTMGSQAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKNVWTAEANQTVGKDNEDNNVLANQTSLQRQASLSLNGALSKKTVDEVWRDIQQSKDSEEKKSRERQPTLGEMTLEDFLVKAGVVAETSSNKKGAGPVVEIDANITPQFQQTQWMPYPQPQYQSQQAAMMGVYMSGQPIPQPLHVGGGAVMDVPYVDNQLALPTPLMGALSDTQTSGRKRGAPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPLAPSPEPKYQLRRTSSAPF | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21071413 | 21075957 | + | ClCG08G008570.1 | Cla08g00864 | 278519 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g00864 | 321 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 254 | 269 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g00864 | 321 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 4 | 319 | IPR043452 | GO:0003700|GO:0045893 | |
Cla08g00864 | 321 | MobiDBLite | consensus disorder prediction | 252 | 321 | - | - | |
Cla08g00864 | 321 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cla08g00864 | 321 | MobiDBLite | consensus disorder prediction | 252 | 301 | - | - | |
Cla08g00864 | 321 | SUPERFAMILY | Leucine zipper domain | 251 | 296 | IPR046347 | GO:0003700|GO:0006355 | |
Cla08g00864 | 321 | Pfam | bZIP transcription factor | 251 | 298 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g00864 | 321 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 249 | 294 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g00864 | 321 | CDD | bZIP_plant_BZIP46 | 251 | 305 | - | - | |
Cla08g00864 | 321 | Gene3D | - | 249 | 302 | - | - | |
Cla08g00864 | 321 | PANTHER | BZIP TRANSCRIPTION FACTOR | 4 | 319 | - | - | |
Cla08g00864 | 321 | SMART | brlzneu | 247 | 319 | IPR004827 | GO:0003700|GO:0006355 | |
Cla08g00864 | 321 | Coils | Coil | 267 | 301 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g01370 | Cla-Chr3:29164820 | Cla08g00864 | Cla-Chr8:21071413 | 3.65E-79 | dispersed | |
Cla08g00717 | Cla-Chr8:19442724 | Cla08g00864 | Cla-Chr8:21071413 | 3.08E-19 | dispersed | |
Cla08g00864 | Cla-Chr8:21071413 | Cla10g01807 | Cla-Chr10:33973432 | 4.62E-15 | dispersed | |
Cla08g00864 | Cla-Chr8:21071413 | Cla02g02154 | Cla-Chr2:36639460 | 1.69E-32 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
61553 | PF00170 | bZIP_1 | 3.40E-13 | CL0018 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g00864 | K14432 | - | csv:101213915 | 580.482 |