Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g00864 ATGGGGATTCAAACTATGGGGTCTCAGGCCGGAGGTGATCCAAATGGCAAACAATCACAATTCCAGCCATTGGTTCGTCAAAATTCACTGTATAGTCTCACACTGGATGAGGTTCAAAATCAGTTGGGTGATCTAGGAAAGCCTTTAATCAGCATGAACCTTGATGAGCTTCTTAAAAATGTGTGGACTGCTGAGGCCAACCAAACTGTTGGTAAAGACAATGAGGACAATAATGTCTTGGCCAATCAAACATCCCTACAACGTCAGGCTAGTCTTTCATTGAATGGTGCTCTGAGTAAAAAGACTGTCGATGAGGTGTGGAGAGACATTCAACAAAGCAAAGACAGTGAGGAGAAGAAGTCTCGTGAACGGCAACCTACGTTGGGAGAGATGACATTGGAAGATTTTCTGGTGAAAGCAGGGGTGGTTGCTGAGACATCGTCGAATAAAAAAGGTGCGGGTCCTGTTGTTGAAATTGACGCAAATATCACACCCCAGTTTCAACAAACGCAGTGGATGCCGTACCCTCAACCTCAGTATCAGTCTCAACAAGCAGCAATGATGGGGGTTTACATGTCAGGCCAGCCTATTCCCCAGCCACTGCATGTGGGAGGTGGTGCTGTGATGGATGTTCCATATGTAGACAACCAGTTGGCATTGCCAACTCCTTTGATGGGAGCTTTATCTGATACACAGACATCTGGAAGAAAAAGGGGAGCGCCTGAAGACATGATTGAGAAAACTGTCGAGCGTAGACAGAAGAGGATGATAAAGAATCGGGAATCTGCCGCTCGTTCACGAGCAAGGAAGCAGGCATATACCAATGAACTGGAGAATAAAGTTTCACGTTTGGAAGAGGAGAATGAAAGGCTCAGGAAACGGAAGGAGCTGGAAAAGATGCTACCGTTGGCTCCCTCTCCTGAGCCGAAGTATCAGCTTCGAAGAACTTCGTCAGCGCCGTTCTAA 966 46.58 MGIQTMGSQAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKNVWTAEANQTVGKDNEDNNVLANQTSLQRQASLSLNGALSKKTVDEVWRDIQQSKDSEEKKSRERQPTLGEMTLEDFLVKAGVVAETSSNKKGAGPVVEIDANITPQFQQTQWMPYPQPQYQSQQAAMMGVYMSGQPIPQPLHVGGGAVMDVPYVDNQLALPTPLMGALSDTQTSGRKRGAPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPLAPSPEPKYQLRRTSSAPF 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21071413 21075957 + ClCG08G008570.1 Cla08g00864 278519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g00864 321 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Cla08g00864 321 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 4 319 IPR043452 GO:0003700|GO:0045893
Cla08g00864 321 MobiDBLite consensus disorder prediction 252 321 - -
Cla08g00864 321 MobiDBLite consensus disorder prediction 1 23 - -
Cla08g00864 321 MobiDBLite consensus disorder prediction 252 301 - -
Cla08g00864 321 SUPERFAMILY Leucine zipper domain 251 296 IPR046347 GO:0003700|GO:0006355
Cla08g00864 321 Pfam bZIP transcription factor 251 298 IPR004827 GO:0003700|GO:0006355
Cla08g00864 321 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700|GO:0006355
Cla08g00864 321 CDD bZIP_plant_BZIP46 251 305 - -
Cla08g00864 321 Gene3D - 249 302 - -
Cla08g00864 321 PANTHER BZIP TRANSCRIPTION FACTOR 4 319 - -
Cla08g00864 321 SMART brlzneu 247 319 IPR004827 GO:0003700|GO:0006355
Cla08g00864 321 Coils Coil 267 301 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01370 Cla-Chr3:29164820 Cla08g00864 Cla-Chr8:21071413 3.65E-79 dispersed
Cla08g00717 Cla-Chr8:19442724 Cla08g00864 Cla-Chr8:21071413 3.08E-19 dispersed
Cla08g00864 Cla-Chr8:21071413 Cla10g01807 Cla-Chr10:33973432 4.62E-15 dispersed
Cla08g00864 Cla-Chr8:21071413 Cla02g02154 Cla-Chr2:36639460 1.69E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61553 PF00170 bZIP_1 3.40E-13 CL0018 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g00864 K14432 - csv:101213915 580.482