Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla08g00979 | ATGCATGAGCCTGAGGAGGAAAATCGGGATGGTGCTCGCAAGAGAAGATTCAGTGAGCTGGAGCCCGGTGTTGCTTCTGATCAGTCCAATTTCAACCAACCCATGGACGAGGGCTTCATTCCTAGAAGGTACCAAATGGAGGTTTTTGAAGTTGGTATGAGGAGAAACACCGTAGCCGTGTTGGAAACAGGTTCTGGAAAGACCATGATCGCAGTGATGCTTATGAAAGAAATTGGAAAAGCTATGAAGTCCAGTGGTGATAAGAAGTTCATCATTTTCTTGGCTCCAACTGTTCATTTGCAATTTAACGTTATTAAAGTTCATACTGATTTTGAAGTGGCGGAATATTATGGTGCCATGGGGGTCGATGATTGGAATATGAACCGCTGGGACAAGGAAACAAGCGAACGCGATGTACTCGTTATGACCCCCCAAATTCTTCTTGATGCACTAAGGAAGGCATATTTTAGACTGGGAAGCGTATGCTTGATGATCATTGATGAATGCCATCGTGCCACTGGTAATCACCCTTATACGAAAATCATGAAGGAATTTTATCACAAATCTGACAACAAACCAAAGATTTTTGGAATGACTGCCTCACCTGTTATTAGAAAAGGTGTTTCCTCTTCCTCTGATTGTGAATGCCAAATAGCAGACCTTGAAAGTATCTTGGATTGTCAGATTTATTCTATTGAAGATAAGAAAGAAGTGGAAATATATGTTCCCTCTGCAAAGGAAATTTGCATATTTTATGAACCCGCTAAGCCTCAAACGTTGGAGTTGAAGGCAAAGATAGAAGCTCTGTGGTCCAAGTTTGATGCTTTATTGTCAAACTCACAAGGGGCAATGCAAGGTCATTATAAAGATGTAGACAGTAAGCTTAAGGCACTGAAGAAACGACTGTCCAGTGATCATTTAAAGGTTGCTTATTGCCTTGACGAACTTGGTGTTATGTGTGCTTATGAGGCGATTAAAGTTCTATTAGAGAATGTCAAAGTTCCGAACGAGGAATCTGAGGTTTATAGAGAAAGTTTTTTGCAATATAAACATTTTCTTGAGGAAGCATTACTTGTAATTGGGGAATCATTTCCACTTGAATATGAGCAAACCGACACCACTTCAGGTCTGTCTACACAGTCTTCAGGATACTACGGAAAGGGAGCCCTAGATCCAGTTCCACGTTGGCAATCTCCTTTCAATCTTGTCTTGCACTGGTTGACCCAAAATCTTTTGGGTGAAGGAAATGAGAATATACCAAAATGTGGTTTTGACTTTTGGAAAGCTGTAGACTTGGGCTACATTTCTCCTAAATTGTTTGAACTTCTCCAACTCTTTGAATCATTTGGGGTATCTAGGCAGGTGCTCTGTCTCATATTTGTTGAAAGAATAGTTGCCGCTAATGTTATCGAAAGAATTGTGAAAAAAGTAGCAAATTTATCTCATTTTACGGTTTCATATGTGACGGGATGTAATACATCAGTTGGTGCACTGGCACCGAAAGTCCAGAAGGAGACATTGGAGTTGTTTTGTCATGGCAAGGTGATCATATACATCATTCAGATTGCATTTTGGTTTAAGAAACTCCAGTTGTTTATGGCTAAAACCGTTCAATGTTTGCAGCTCAATCTATTATTTTCCACTGATGTAGTTGAGGAGGGACTTCATGTACCAAATTGCTCATTTGTGGTACGGTTTGACCTTCCTAAGACGGTTCGTAGTTATGTACAATCTCGAGGTCGTGCTCGACAGAACAACTCCCAATATATTTTGTTGCTGGAGAGGGTATCTAGGCAGGTGCTCTGTCTCATATTTGTTGAAAGAATAGTTGCCGCTAATGTTATCGAAAGAATTGTGAAAAAAGTAGCAAATTTATCTCATTTTACGGTTTCATATGTGACGGGATGTAATACATCAGTTGGTGCACTGGCACCGAAAGTCCAGAAGGAGACATTGGAGTTGTTTTGTCATGGCAAGGTGATCATATACATCATTCAGATTGCATTTTGGTTTAAGAAACTCCAGTTGTTTATGGCTAAAACCGTTCAATGTTTGCAGCTCAATCTATTATTTTCCACTGATGTAGTTGAGGAGGGACTTCATGTACCAAATTGCTCATTTGTGGTACGGTTTGACCTTCCTAAGACGGTTCGTAGTTATGTACAATCTCGAGGTCGTGCTCGACAGAACAACTCCCAATATATTTTGTTGCTGGAGAGGGGAAACCTGAAGCAAAGAGCTCAGCTATTTGATGTCATAAGGAGTGACCGATCAATGACAGATGCAGCTACGAGTAGAGACCCTGATGCATGCATTTTGAAACCTTTTTCAATTGTGGAGACAGATTGTTACACTGTGGAGGCAACTGGGGCTTCGGTTACTGCAGATTCTAGTGTTGGTCTCATATACCAATACTGTAAAAAGCTCCCTGGTGATAAATATTTCAGTCCAAAACCAATCTTTCAACTCTCATATGGTGAAGGATCCTACGAGTGTCAGCTAACTTTACCTCCTACAGCAGCTTTTCAAACCATAGTTGGTCCTTCAACTAGGAATTCTAATCTGTCTAAGCAGCTTGTATGCCTGGAGGCATGTAAGAAGCTACATCAAATGGGTTCACTTAATGACCATCTTCTCCCTTCTGTTGAAGAGAGATCAGAATTTGACATGGGTCTGAAAAGCAATGCATCCACTTCTAGAGCAGGATCAACAAAAAGAAAGGAACTGCATGGCAGAACTGCGATTAGAGCTTTAGCTGGAACTTGGGGAGAACAAGTTGAAGGGGCCACTTTTCAGGCATATAAATTTGACTTCTCCTGTAGTGTTATGTATGAGGTTTATTCTGGATTTGTTCTTCTGATAGAATCAAAACTTGATGATGACGTGGGCAATTTTGAACTTGAACTTTATCTACTCTCAAAAACGGTTAAGGCTTCTGTGTCTTTTGGCGGGGAGGTTCATTTGGATGCTGAACAGATAGCAAAAGCAAAGTGCTTTCAGGAGCTTTTCTTCAACGGATTGTTTGGGAGACTGTTCATTGGGTCAAAATCAACTGGAAAAAAGAGGGATTTTTTACTTCAGAAAGATACACAACCTCTTTGGATTTCATCAAACATGTATCTGCTTCTACCAGTGAATTTGCCGGATGATTCAACTCATGATTTATGGAAAATACATTGGAGAGCAATTGATTCCTGTGTGTCTGTGGTTGAGTTTTTGAAGAAAAATTCATCTTTGGATGCTGAAAGAAATTGTGGTGCTGATGCCATATCAGATTCATCACCTTCTAGAAATAACTCTGCTGAAACTGGAAGCAATGCTGCAAGTTTAATTCACTTTGCAAATTGTGTTCTAGATGTTCATTCCTTGAAGGACAGGGTGGTATTGGCTATTCATACTGGAAGAATCTACTCAATCGTTGAAGTTGTCAGTAATACATCTGCTGAGAGCCCTTTTGATGGGAATAGTGACAAAGCACCACCTGATTACATTACCTTTGGGGACTATTTCAAAAAAAGGTATGGAATTTTGCTAATTTTTCCAAAACAGCCTCTGTTGCGTTTAAAGCAAAGTCATAATCCTCACAATCTACTTGTCAACTTTAAGGATGAAGGCAATACCAGCGATAAGTCGCTATCTGGTCCTGCATTCAGAAAGCCACAAATGCATGTTCATATGCCTCCTGAACTTCTGCTTAGCATGGATGTCCCAAAGGGGGTTTTGAAGTCTTCATACTTGCTGCCATCTTTGATGCACCGTTTTGAATCTTTGATGTTAGCCAGCCAGCTTAGGAAGGAGATTAATTATCACTCGAACAGCCTCTGTATATCAAGCTCTTTGATTTTGGAAGCACTTACAACCCTTGGAAGTTGTGAGAGTTTTTCCTTAGAGCGGTTAGAATTGCTTGGTGATTCAGTGCTGAAGTATGCTGTGAGCTGCCACCTCTTTCTCAAGTTCCCTGAAAAACATGAAGGGCAGTTATCTTCTAGGCGGCAACAGGTTATCTGTAATGCAACCTTACATGCATTGGGAACAAAGTGCAGGTTACAGTTACAAGCTCAGGCTTCATTGGGAATCACTTTTGTTAATCATGTCTCATCTGGTGTGGCTGGAACATGGCTGTCTTTGGGATACATACGTGATTCTGCATTTGACCCACGTCGGTGGGTGGCACCAGGACAAGGTACTAATCGTCCTGTTCCTTGTAAATGTGGAGTGGATACAGTAGAAGTTCCTTTGGATGAAAAGTTCTGCACTGAAGATCCAAAAGTTGTTTTGGGTAAGTGCTGTGATAAGGGACACAGGTGGGTGGTTTCAAAAACTATAGCCGACTGTGCTGAAGCCCTTATAGGGGCCTATTATGTTGATGGTGGAATCATTGCTGCACTCCATGTGATGAAGTGGCTTGGAATTGATGCTGATCTGGACGTAGCATTAGCTGTTGATGCAATTACTTCTGCATCTCTGAGATCCTGCCCTTTGGAAGATACTGAGATTGCAACCATCGAGTCAAAAATTGGATATGATTTTGCTGTCAAAGGATTATTGGTGGAGGCTATAACACACACATCTGATCAAGAACTTGGTGTTAATTACTGTTACCAGAGGCTTGAGTTTCTTGGTGACTCAGTGTTAGACTTGCTCATTACTTGGCATTATTATCAGAAGCACTCAGATATTGACCCAGGGGAGTTGACTGATTTACGTTCAGCTTCTGTTAATAATGAAAATTTTGCTCAAGTGGCTGTGAGACGGAATCTTCAGCAACATCTTCAACATTGTTCTGGGCTTTTGATGAGTCAAATTGCTGAATATGTGAAGTTTTTGTCTGAGTCTCATGATACTGGGAAGTCACTGCATGGGAACAAAGGCCCCAAGGTTCTTGGTGATATGGTGGAAAGTATTGCAGGTGCCATACTGGTTGACACAAAGCTTAATCTTGACGAAGTGTGGAAAATATATAAGCCACTATTGACTCCATTTGTGACCCCTGATAAACTTGAACTTCCACCACTCCGAGAACTAATTGAATTATGTGATTCTCTTGGGTATTTCATCAAAGATAAATGTACTAGGAAGGGAGAAATTTTTCATGCAGAACTTAGATTACAGTTGCAAGATGCCCTATTGATAGGTGAAGGATATGAACGAACCAGAAAAGCCGCAAGAGGGGAAGCTGCTCATCGCTTATTAGTTCAACTTGAGACAAGAGGAATTTCTTATTCTCGTTCTGGCTCTAAGAAGAGAAAACAAAATCCCAGTCACATTGAGGCTGCTATCGATCTCCCATCATCTGTCAACTGTTCTGCAGAAGCCTGTGATCCCAACTTGGAGACCCCTGTTATTGGACCAGTCAGCTTAAAGAAAGGAGGACCGCGGAGTACTCTGTTTGAACTATGCAAGAAACTGCAGTGGCCAATGCCAACTTTCAATACAGCTGAAAATAAATCAAGGGTCCAAATCGAGATTGGCGAAGGCTCAGAGAAAAGAAAAGGATTCAACAGTTTTTTGTCAAATATTATTTTGCAAATACCCAATGCTGGCTGTATTGAATGTGAAGGTGAAGCTCGAGCCGACAAGAAGAGCTCACTGGACTCGGCATCTCTTGTCATGCTTCAGGAACTCCGACAACGAGGAAGAGTCATTATTAACGACTCATGA | 5661 | 41.07 | MHEPEEENRDGARKRRFSELEPGVASDQSNFNQPMDEGFIPRRYQMEVFEVGMRRNTVAVLETGSGKTMIAVMLMKEIGKAMKSSGDKKFIIFLAPTVHLQFNVIKVHTDFEVAEYYGAMGVDDWNMNRWDKETSERDVLVMTPQILLDALRKAYFRLGSVCLMIIDECHRATGNHPYTKIMKEFYHKSDNKPKIFGMTASPVIRKGVSSSSDCECQIADLESILDCQIYSIEDKKEVEIYVPSAKEICIFYEPAKPQTLELKAKIEALWSKFDALLSNSQGAMQGHYKDVDSKLKALKKRLSSDHLKVAYCLDELGVMCAYEAIKVLLENVKVPNEESEVYRESFLQYKHFLEEALLVIGESFPLEYEQTDTTSGLSTQSSGYYGKGALDPVPRWQSPFNLVLHWLTQNLLGEGNENIPKCGFDFWKAVDLGYISPKLFELLQLFESFGVSRQVLCLIFVERIVAANVIERIVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFCHGKVIIYIIQIAFWFKKLQLFMAKTVQCLQLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERVSRQVLCLIFVERIVAANVIERIVKKVANLSHFTVSYVTGCNTSVGALAPKVQKETLELFCHGKVIIYIIQIAFWFKKLQLFMAKTVQCLQLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQNNSQYILLLERGNLKQRAQLFDVIRSDRSMTDAATSRDPDACILKPFSIVETDCYTVEATGASVTADSSVGLIYQYCKKLPGDKYFSPKPIFQLSYGEGSYECQLTLPPTAAFQTIVGPSTRNSNLSKQLVCLEACKKLHQMGSLNDHLLPSVEERSEFDMGLKSNASTSRAGSTKRKELHGRTAIRALAGTWGEQVEGATFQAYKFDFSCSVMYEVYSGFVLLIESKLDDDVGNFELELYLLSKTVKASVSFGGEVHLDAEQIAKAKCFQELFFNGLFGRLFIGSKSTGKKRDFLLQKDTQPLWISSNMYLLLPVNLPDDSTHDLWKIHWRAIDSCVSVVEFLKKNSSLDAERNCGADAISDSSPSRNNSAETGSNAASLIHFANCVLDVHSLKDRVVLAIHTGRIYSIVEVVSNTSAESPFDGNSDKAPPDYITFGDYFKKRYGILLIFPKQPLLRLKQSHNPHNLLVNFKDEGNTSDKSLSGPAFRKPQMHVHMPPELLLSMDVPKGVLKSSYLLPSLMHRFESLMLASQLRKEINYHSNSLCISSSLILEALTTLGSCESFSLERLELLGDSVLKYAVSCHLFLKFPEKHEGQLSSRRQQVICNATLHALGTKCRLQLQAQASLGITFVNHVSSGVAGTWLSLGYIRDSAFDPRRWVAPGQGTNRPVPCKCGVDTVEVPLDEKFCTEDPKVVLGKCCDKGHRWVVSKTIADCAEALIGAYYVDGGIIAALHVMKWLGIDADLDVALAVDAITSASLRSCPLEDTEIATIESKIGYDFAVKGLLVEAITHTSDQELGVNYCYQRLEFLGDSVLDLLITWHYYQKHSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQIAEYVKFLSESHDTGKSLHGNKGPKVLGDMVESIAGAILVDTKLNLDEVWKIYKPLLTPFVTPDKLELPPLRELIELCDSLGYFIKDKCTRKGEIFHAELRLQLQDALLIGEGYERTRKAARGEAAHRLLVQLETRGISYSRSGSKKRKQNPSHIEAAIDLPSSVNCSAEACDPNLETPVIGPVSLKKGGPRSTLFELCKKLQWPMPTFNTAENKSRVQIEIGEGSEKRKGFNSFLSNIILQIPNAGCIECEGEARADKKSSLDSASLVMLQELRQRGRVIINDS | 1886 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 22465728 | 22489615 | - | ClCG08G009740.1 | Cla08g00979 | 278634 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla08g00979 | 1886 | ProSiteProfiles | Dicer double-stranded RNA-binding fold domain profile. | 798 | 888 | IPR005034 | GO:0016891 | |
| Cla08g00979 | 1886 | ProSiteProfiles | Ribonuclease III family domain profile. | 1499 | 1644 | IPR000999 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | CDD | DEXHc_dicer | 39 | 234 | - | - | |
| Cla08g00979 | 1886 | SUPERFAMILY | RNase III domain-like | 1251 | 1477 | IPR036389 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | CDD | RIBOc | 1515 | 1665 | IPR000999 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | SMART | helicmild6 | 616 | 730 | IPR001650 | - | |
| Cla08g00979 | 1886 | SMART | helicmild6 | 471 | 585 | IPR001650 | - | |
| Cla08g00979 | 1886 | Gene3D | Ribonuclease III domain | 1255 | 1469 | IPR036389 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | Gene3D | Ribonuclease III domain | 1495 | 1664 | IPR036389 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | PANTHER | ENDORIBONUCLEASE DICER HOMOLOG 3 | 29 | 371 | - | - | |
| Cla08g00979 | 1886 | PANTHER | DICER-RELATED | 409 | 517 | - | - | |
| Cla08g00979 | 1886 | SUPERFAMILY | PAZ domain | 1121 | 1231 | IPR036085 | GO:0005515 | |
| Cla08g00979 | 1886 | SMART | ultradead3 | 37 | 241 | IPR014001 | - | |
| Cla08g00979 | 1886 | Pfam | Helicase conserved C-terminal domain | 453 | 582 | IPR001650 | - | |
| Cla08g00979 | 1886 | Pfam | Helicase conserved C-terminal domain | 593 | 727 | IPR001650 | - | |
| Cla08g00979 | 1886 | Pfam | Ribonuclease III domain | 1297 | 1458 | IPR000999 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | Pfam | Ribonuclease III domain | 1535 | 1643 | IPR000999 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | PANTHER | DICER-RELATED | 29 | 371 | - | - | |
| Cla08g00979 | 1886 | PANTHER | ENDORIBONUCLEASE DICER HOMOLOG 3 | 409 | 517 | - | - | |
| Cla08g00979 | 1886 | SUPERFAMILY | RNase III domain-like | 1498 | 1664 | IPR036389 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Cla08g00979 | 1886 | PANTHER | ENDORIBONUCLEASE DICER HOMOLOG 3 | 535 | 595 | - | - | |
| Cla08g00979 | 1886 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Cla08g00979 | 1886 | Pfam | PAZ domain | 1122 | 1255 | IPR003100 | GO:0005515 | |
| Cla08g00979 | 1886 | ProSitePatterns | Ribonuclease III family signature. | 1535 | 1543 | IPR000999 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 617 | 769 | IPR001650 | - | |
| Cla08g00979 | 1886 | Gene3D | paz domain | 1109 | 1232 | - | - | |
| Cla08g00979 | 1886 | ProSiteProfiles | Ribonuclease III family domain profile. | 1260 | 1458 | IPR000999 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | PANTHER | DICER-RELATED | 680 | 1881 | - | - | |
| Cla08g00979 | 1886 | PANTHER | DICER-RELATED | 596 | 662 | - | - | |
| Cla08g00979 | 1886 | Gene3D | - | 1798 | 1877 | - | - | |
| Cla08g00979 | 1886 | Pfam | Dicer dimerisation domain | 798 | 883 | - | - | |
| Cla08g00979 | 1886 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 48 | 202 | IPR014001 | - | |
| Cla08g00979 | 1886 | SMART | PAZ_2_a_3 | 1067 | 1259 | IPR003100 | GO:0005515 | |
| Cla08g00979 | 1886 | PANTHER | DICER-RELATED | 535 | 595 | - | - | |
| Cla08g00979 | 1886 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 55 | 584 | IPR027417 | - | |
| Cla08g00979 | 1886 | Gene3D | - | 599 | 762 | IPR027417 | - | |
| Cla08g00979 | 1886 | Gene3D | - | 432 | 598 | IPR027417 | - | |
| Cla08g00979 | 1886 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 596 | 746 | IPR027417 | - | |
| Cla08g00979 | 1886 | Pfam | Type III restriction enzyme, res subunit | 55 | 202 | IPR006935 | GO:0003677|GO:0005524|GO:0016787 | |
| Cla08g00979 | 1886 | CDD | RIBOc | 1279 | 1469 | IPR000999 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | Gene3D | Dicer dimerisation domain | 793 | 890 | IPR038248 | - | |
| Cla08g00979 | 1886 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 441 | 626 | IPR001650 | - | |
| Cla08g00979 | 1886 | Gene3D | - | 37 | 270 | IPR027417 | - | |
| Cla08g00979 | 1886 | ProSiteProfiles | PAZ domain profile. | 1123 | 1235 | IPR003100 | GO:0005515 | |
| Cla08g00979 | 1886 | PANTHER | ENDORIBONUCLEASE DICER HOMOLOG 3 | 680 | 1881 | - | - | |
| Cla08g00979 | 1886 | PANTHER | ENDORIBONUCLEASE DICER HOMOLOG 3 | 596 | 662 | - | - | |
| Cla08g00979 | 1886 | SMART | riboneu5 | 1514 | 1667 | IPR000999 | GO:0004525|GO:0006396 | |
| Cla08g00979 | 1886 | SMART | riboneu5 | 1279 | 1478 | IPR000999 | GO:0004525|GO:0006396 |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla08g00979 | K11592 | DICER1, DCR1; endoribonuclease Dicer [EC:3.1.26.-] | - | csv:101205038 | 2272.28 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla05g00003 | Cla-Chr5:65016 | Cla08g00979 | Cla-Chr8:22465728 | 2.27E-75 | dispersed | |
| Cla06g01204 | Cla-Chr6:25223034 | Cla08g00979 | Cla-Chr8:22465728 | 4.28E-18 | dispersed | |
| Cla08g00979 | Cla-Chr8:22465728 | Cla11g00833 | Cla-Chr11:12610915 | 5.68E-07 | dispersed | |
| Cla08g00979 | Cla-Chr8:22465728 | Cla10g00491 | Cla-Chr10:6447918 | 3.77E-06 | transposed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi4g179 | . | . | . | . | Bpe02g01567 | . | . | . | . | . | . | . | . | . | . | . | . | Bhi04g01135 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone17ag0954 | Cone20ag0298 | . | . | . | Cme03g01722 | . | . | Bda01g01354 | . | . | Bpe04g00456 | Bma01g00904 | . | . | . | . | . | . | . | Car05g00890 | . | . | . | . | . | . | . | . | . | Cla08g00979 | Cam08g1428 | Cec08g1006 | Cco08g1129 | Clacu08g1133 | . | Cre08g0917 | Lsi08g00826 | . | Chy03g00649 | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0006008 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 38 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cla08g00979 | Cla_Chr08 | FPKM | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |