Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01010 ATGCCCAAAGAACCCCCGCCACAATTGAGAAAGACCCACTCATATTGTAACGAAAGCCATCTTCCGGCATCGGATTATTGCAAGTTCATTCAGATTCCGGATATGGAGGAAGAGGAAACCGGAGAGGCTATCCGGCCGGAATTTCCAACGGGGCGAGTGAAGAAGATAATGAAGCTCGACAAGGATATTGGCAAAGTGAATTCAGAAGCCCTGTTTCTAGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAAACCGTGAAGCTTGAACACATCCGAATCGCCGCCAAAAGGCATCGATCGATTAGTGATTTTCTACTCGATTCGCTTCCTCTTCCTTCTCAGCGGTCGGATGCGCCGGCAAAGGACGAGAATCGCACTCGCACTGTCGTTGATAAAGTGGCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCATAG 525 50.67 MPKEPPPQLRKTHSYCNESHLPASDYCKFIQIPDMEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTRRIDDFFRRPAKTTSAETNES 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22835368 22836006 + ClCG08G010070.2 Cla08g01010 278665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01010 174 MobiDBLite consensus disorder prediction 155 174 - -
Cla08g01010 174 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 29 163 - -
Cla08g01010 174 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 29 163 - -
Cla08g01010 174 MobiDBLite consensus disorder prediction 125 148 - -
Cla08g01010 174 Gene3D Histone, subunit A 12 125 IPR009072 GO:0046982
Cla08g01010 174 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 47 109 IPR003958 -
Cla08g01010 174 SUPERFAMILY Histone-fold 46 125 IPR009072 GO:0046982
Cla08g01010 174 MobiDBLite consensus disorder prediction 133 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g02053 Cla-Chr2:35585897 Cla08g01010 Cla-Chr8:22835368 6.88E-07 dispersed
Cla08g01010 Cla-Chr8:22835368 Cla11g01280 Cla-Chr11:26323251 1.39E-10 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61564 PF00808 CBFD_NFYB_HMF 2.20E-19 CL0012 Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01010 - - cmo:103488501 234.958