Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01021 ATGGACGATGGAGCAGCTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTGTACCACCACCGCAGCACGACCCGGCGGCGCACCAGCAGCATCAGCATCAGCCGCCGTCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTTATTCAGTATAATATCTTTGGTAACATCTTCGAAGTTACGGCCAAGTACAAGCCTCCCATCATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCTGCTCTCAACTCCGAGACCAACGAGCATGTGGCGATCAAGAAGATTGCTAATGCGTTTGATAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTTCTTCGGCATATGGATCATGAAAACGTCATAAGGGCATTCCTCATAGTTGGTGATGCTACTTCCCCTAACGAGATGAGTTCTTGTGTTTATGATGGTTTAATTGGATTATTGATGATGGTGTTTCAGGTTGTTGCAATTAGGGATATCATACCTCCACCTCTTAGGGAAACATTCAATGATGTTTATATAGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCGGAGGAGCATTGTCAGTATTTCCTGTACCAGATTCTCCGTGGATTGAAGTACATACATTCAGCTAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTGCTATTAAATGCCAACTGTGACCTGAAAATATGTGATTTCGGACTTGCTCGTGTTACTTCTGAAACTGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGTGCACCAGAGCTCTTACTTAATTCATCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCATTGTTTCCTGGTAGAGATCATGTGCATCAGTTGCGCTTGCTTTTGGAGCTGATTGGCACCCCATCAGAGGCTGATCTTGGTTTTTTGAACGAGAATGCTAAAAGATACATACGGCAACTACCTCATTACCATCGTCAGTCATTCACTGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGACAGAGAATTACCGTTGAAGATGCTCTTGCTCATCCTTATTTGACTTCATTGCATGACATTAGTGATGAGCCTGTCTGCATGACACCCTTCAGCTTTGATTTCGAGCAGCATGCGCTTACCGAGGAACAGATGAAAGAGCTGATCTATCTAGAGGCGCTTGCATTTAACCCCGAGTATCATCACCAATAA 1320 44.62 MDDGAASQPDDTVMSEAASVPPPQHDPAAHQQHQHQPPSMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVIRAFLIVGDATSPNEMSSCVYDGLIGLLMMVFQVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPHYHRQSFTEKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYLEALAFNPEYHHQ 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22915567 22924275 + ClCG08G010180.2 Cla08g01021 278676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01021 439 MobiDBLite consensus disorder prediction 29 43 - -
Cla08g01021 439 SUPERFAMILY Protein kinase-like (PK-like) 77 399 IPR011009 -
Cla08g01021 439 Gene3D Phosphorylase Kinase; domain 1 48 153 - -
Cla08g01021 439 Gene3D Phosphorylase Kinase; domain 1 164 435 - -
Cla08g01021 439 ProSiteProfiles Protein kinase domain profile. 72 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01021 439 CDD STKc_TEY_MAPK 65 434 - -
Cla08g01021 439 SMART serkin_6 72 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01021 439 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 164 437 - -
Cla08g01021 439 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 34 135 - -
Cla08g01021 439 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 164 437 - -
Cla08g01021 439 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 34 135 - -
Cla08g01021 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Cla08g01021 439 Gene3D Transferase(Phosphotransferase) domain 1 192 413 - -
Cla08g01021 439 Pfam Protein kinase domain 77 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla08g01021 439 MobiDBLite consensus disorder prediction 1 44 - -
Cla08g01021 439 ProSitePatterns Protein kinases ATP-binding region signature. 78 102 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00195 Cla-Chr3:2172289 Cla08g01021 Cla-Chr8:22915567 0 dispersed
Cla08g01021 Cla-Chr8:22915567 Cla08g01463 Cla-Chr8:27534927 1.88E-141 dispersed
Cla08g01021 Cla-Chr8:22915567 Cla06g00323 Cla-Chr6:4131335 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80748 PF00069 Pkinase 2.90E-70 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01021 K14512 - csv:101204301 784.252