Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01043 ATGTCTTCCGCCGAGAAGGAAAGAGAGACCCAGGTGTACATGGCCAAGCTCGCCGAGCAGGCCGAACGCTATGACGAAATGGTTGAGTGTATGAAGAATATTGCAAAACTTGACCTCGAACTAACTGTAGAGGAGAGGAACCTTCTTTCTGTGGGATACAAAAATGTCATAGGTGCCCGACGAGCTTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGTCTAAGGGGAATGAGAACATTGTAAAATTGATAAAGAGTTACCGCCAGAAAGTGGAGGAGGAGCTTTCAAAGATTTGTGGTGACATTCTCTCTATCATAGACAAGCATCTAATCCCTCATTCATCCTCTGCAGAAGCCACCGTTTTCTACTACAAGATATTTGATACTGATGAATTTCTGGTTTACTGTGTTTCTTTTTTTGAATATCGGTGGCCTTTGATTCCACCCAGTACATCACGGGGACACTTTGCGCGCCCCAATGTTGGGATATATGTTCTGTTCATTCTCAAAATCTATCAGATAGGCCATAGATTTGTTGATAATGAATATGGCTTGATCTTGTTGTTTTCTTGTCCATCCTTTTTCGCTGCCTCAGGCACTGCGAATACCGAACTCCCATCAACCCACCCAATCCGTCTTGGCCTTGCACTCAATTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCTGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGACGAAAACTTCAAAGCTGAGGAATCCAAACCTGCGGAACCTGAGGCTCAGCAAGCCAAATGA 825 43.88 MSSAEKERETQVYMAKLAEQAERYDEMVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKSYRQKVEEELSKICGDILSIIDKHLIPHSSSAEATVFYYKIFDTDEFLVYCVSFFEYRWPLIPPSTSRGHFARPNVGIYVLFILKIYQIGHRFVDNEYGLILLFSCPSFFAASGTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSDENFKAEESKPAEPEAQQAK 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23114095 23117476 - ClCG08G010400.2 Cla08g01043 278698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01043 274 SUPERFAMILY 14-3-3 protein 7 259 IPR036815 -
Cla08g01043 274 PIRSF 14-3-3 2 143 IPR000308 -
Cla08g01043 274 PIRSF 14-3-3 190 264 IPR000308 -
Cla08g01043 274 Gene3D - 1 144 IPR036815 -
Cla08g01043 274 Gene3D - 171 263 IPR036815 -
Cla08g01043 274 PANTHER 14-3-3 PROTEIN 4 128 IPR000308 -
Cla08g01043 274 SMART 1433_4 8 269 IPR023410 -
Cla08g01043 274 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cla08g01043 274 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cla08g01043 274 PANTHER BNAC03G57490D PROTEIN 4 128 - -
Cla08g01043 274 PANTHER 14-3-3 PROTEIN 196 260 IPR000308 -
Cla08g01043 274 Coils Coil 14 34 - -
Cla08g01043 274 Pfam 14-3-3 protein 198 259 IPR023410 -
Cla08g01043 274 Pfam 14-3-3 protein 14 128 IPR023410 -
Cla08g01043 274 PANTHER BNAC03G57490D PROTEIN 196 260 - -
Cla08g01043 274 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01043 Cla-Chr8:23114095 Cla08g01123 Cla-Chr8:23987753 8.11E-81 dispersed
Cla08g01043 Cla-Chr8:23114095 Cla11g01382 Cla-Chr11:27349996 5.32E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01043 - K06630 csv:101221858 352.829