Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01069 ATGGCTTCCCTTTCCCATCTTCTTCTTCTTTATCATCTTCTTCTTCTTCTTCCTCTCTCTTTCTTTTCTGCAAATTCATCCTCCATAGCCACTCTGCAAAACCTCCCCCTCAAGCATTATGTTGTTTACATGGGAAATGGAAGAATCAACAATGAAGAAGATGAACAAACAACTGCTGAATTGGATTACTTGCAACTTTTATCCTCTGTTATTCCAAGTACAATAGGAGTGAGAGGATTTGAAGTTTGGAACCCAAAATCCTTGATTGATATTGCATGTATTGATGGAATCGTGTCGGTGTTCCCTGATCCGACGCTTCACCTCCACACTACACGTTCTTGGGATTTCTTGGACTCCATCTCCGGCCTCCGCCCTCCCACGCCACTTCCGCCGCCGCATTCTTACCCCAGTACATCGGATGTCATCGTCGGCGTCATTGACACCGGGATTTGGCCGGAGTCTCAATCTTTCAACGATGAGGGGATTGGAGAAATTCCATCTAAATGGAAAGGAGTCTGTATGGAGGCACCTGATTTCAAGAAGTCTAATTGCAACAGGAAGTTGATAGGTGCAAGATACTATAATGTTATAGAACTCAATGGGAATGATAGCCATGTGGGGGCTCCGAAGGGCACACCGAGGGATTCGCTCGGCCATGGGACCCACACTGCGTCGATAGCAGCCGGAGCCAGAGTCCCCAATGCAAGTTACTTTGGCTTAGCGAGAGGGACGGCGAGAGGCGGTGGCATTCCTTCCACAAGGATTGCAAGCTATAAGGTTTGTGCTGGTGTTGGATGCTCTGGTGCTGCAATTCTCAAAGCCATTGATGATGCAGTTAGGGATGGAGTTGATATCATTTCGATCTCGATTGGGATTGGTTCCCCTTTGTTTCAATCTGATTATTTGAATGACCCAATTGCCATTGGAGCATTCCATGCCCAACTAATGGGAGTTTTGGTTGTCTGCTCTGGTGGGAATGATGGCCCTGACCCTAACACTGTGGGGAACGTTGCTCCTTGGATTTTCACTGTTGCTGCTTCTAATATTGACAGGGATTTCCAGTCCTCTGTGGTTCTTGGCAATGGGAAGACTTTTCATGGGACTGCTATAAATCTCTCAAATCTTACTAGCTCAAAGACTTATCCTCTTGTATTTGGAAAGGACGCTGCTGCTAAATTCACACCCGTATCAGAAGCAAGGAATTGTTATCCAGGATCGCTGGATCGATCAAAAGTTGCAGGCAAGATTGTCGTTTGTGCCTCTGATGACTTCAGTACTTCAAGGACAATAAAGGAACTGGTCGTTCAAGATGCTAAAGCCATGGGGTTAATACTGATCAATGAGGCATCAAAAACTGTGCCAATGGATTCAAACATTTTCCCATTTACACAAATTGGGAATTCAGATGGTCTTCAGATTCTTGAGTACATTAACTCCACCAAGAACCCAACAGCCACAATTCTCAGAACAGTGGAAGTTCAAAGACTCAAACCGGCTCCAATTGTGGCTTATTTCTCATCGAGAGGCCCATCTCCACTTACCGAAAACATTCTCAAGCCGGATATTACAGCTCCGGGAGTATCCATTTTAGCAGCTATGATTCCAAAGAGTGATGGAGATAGTGGTCCAATTGGTAAGAAGCCTTCCAATTATGCAATGAGATCCGGGACGTCAATGGCATGCCCTCATGTAGCAGGCGCTGCTGCATTCATCAAATCGGTTTATCACGACTGGAGTTCTTCCATGATCAAATCTGCACTCATGACAACAGCAACTCAATACGATAATCAAAGGAAATTCATGAGAAACAGCACAAACAACCCTTCAAACCCACATGAGATGGGAGCTGGAGAAATAAGCCCCATAAAAGCTCTTAATCCTGGATTGGTTTTCGAAACTACGAACGAAGATTATCTTCGTTTCCTCTGTTATTATGGGTATTCAAACAAGGTCATAAGATCTGTGTCGAAACAAAACTTCAGCTGTCCGAAAACTTCAAAAGAAGATCTTATCTCCAATGTCAATTATCCATCCATCTCCATTGGAAAACTAGACAGTAAACAAGCTGCCAAAGTAATAGAAAGAACTGTGACAAACGTAGGAGCTCCAGATGCCACTTACATTGCCAAGGTTCATTCTTCAGAGGGTTTAATAGTGAAAGTGAATCCAAGGAAGATTGTTTTCTCTGAGAAGGTAAAGAAAGTGACCTTCAAAGTTTCATTTTACGGCAAGGAGGCTCGCAGCGGCTACAACTTCGGGACGATCACGTGGCGGGACACTGCACATTCCGTTCGAACTTTTTTTGCTGTAAATAACACAAGAGCTTTCAACCATGGATCAGAGAAGACAACATTTAGAAGCGGTGGTTTCGATCCCAATGCTTCCTTTTCATTCTTCCGAAACATGGGTTCTGTCCGAAAGAATGTCATGTTCCTCGAGAATTGGAACCCATCATGTAATGGCGTCAGTAGGTTTACTCTTGTTGTGGGGTACCGTTGGATTCATTCAGATAAATCTGTTGAGCCTTTAGAGAAAAGTGAGGGGAAATCTGCTATTACTTCTACAGACGGAAGTAGAAGTGAGGAGGAGAAGAAGAAGACGAGGAAAAAGCTGAAGGGTAAAAGAGCAGTAGTAAGGTGGCTTAAGTTTTTCAGGTGGAAGAAGAAGAAAGAGTATGAGAGAATGACAGCGGAAGAGAAAATTCTCTTCAAATTGAATAAGGCACGTAGAAAAGAGAAAAGGCTTGTTGAAGCGCTGGAAAAGATTGAGCCTGCCGATTCATCAGATACAACCCATGATCCCGAGATATTGACACCAGAGGAGCACTTCTACTTTCTGAAGATGGGTATCAAGGGAAAGAACTACGTTCCGGTTGGAAGACGTGGTATATACCAGGGTGTAATTCTGAATATGCATCTTCACTGGAAGAAGCATCAGACTGTGAAGGTGGTGGTAAAGACGTTCTCACCGGAAGAAGTCAAAGAGATTGCTGCCGAGCTAGCGAGATTGACTGGAGGGATGGTGCTTGACATTCATGAAGAGAATACCATAATTATGTATAGGGGGAAGAACTACTCACAGCCACCCACAGAGATAATGTCGCCAAGGGTCTCTCTCTCACGGAAGAAGGCTTTGGATAAATCTAAATATAGGGACGGCCTTCGGGCAGTAAGAAAGCACATTCCAAAACTTGAGCAAGACCTTAGGTTATTACAATCTCAAGCCAAACTGAACTCGAAGAGCAATGGTGATTTTATTGAACATGTGCAAGAATCCGTCGACGACACAGATAAATCCAAGGCTATTTCAAGCCTCGGCTTGGAGAATTTGGACGAGTCAAAGGAAGCCTTAAGAGTTAGCAAACAATGGTCTGATGATTCTTCTCCTATGGATACAGGAATGAGCTCAGACTCAGAGGACTTGTCAGATATGTTTGAGACCGACTCCGATTCAGAAGCCGATGAGAAGATGAAACAGCCTCTATACTTGAAGGAGTTTGAAAATTTTGCAGCAGAAACTGAAGGCAAAACCGAAGACCTTTACGATCAACTTAGACAGGTATCCATGGACTCTAAGCAAGCCAAAACATTGGAGAAAGATGTCAATTCGCCTGAATTTGACGAGGTGGATCGATTGTTCCTGCGTTCAGCATCACTGTTAAAGAAGAGAAGAAGATAG 3678 43.96 MASLSHLLLLYHLLLLLPLSFFSANSSSIATLQNLPLKHYVVYMGNGRINNEEDEQTTAELDYLQLLSSVIPSTIGVRGFEVWNPKSLIDIACIDGIVSVFPDPTLHLHTTRSWDFLDSISGLRPPTPLPPPHSYPSTSDVIVGVIDTGIWPESQSFNDEGIGEIPSKWKGVCMEAPDFKKSNCNRKLIGARYYNVIELNGNDSHVGAPKGTPRDSLGHGTHTASIAAGARVPNASYFGLARGTARGGGIPSTRIASYKVCAGVGCSGAAILKAIDDAVRDGVDIISISIGIGSPLFQSDYLNDPIAIGAFHAQLMGVLVVCSGGNDGPDPNTVGNVAPWIFTVAASNIDRDFQSSVVLGNGKTFHGTAINLSNLTSSKTYPLVFGKDAAAKFTPVSEARNCYPGSLDRSKVAGKIVVCASDDFSTSRTIKELVVQDAKAMGLILINEASKTVPMDSNIFPFTQIGNSDGLQILEYINSTKNPTATILRTVEVQRLKPAPIVAYFSSRGPSPLTENILKPDITAPGVSILAAMIPKSDGDSGPIGKKPSNYAMRSGTSMACPHVAGAAAFIKSVYHDWSSSMIKSALMTTATQYDNQRKFMRNSTNNPSNPHEMGAGEISPIKALNPGLVFETTNEDYLRFLCYYGYSNKVIRSVSKQNFSCPKTSKEDLISNVNYPSISIGKLDSKQAAKVIERTVTNVGAPDATYIAKVHSSEGLIVKVNPRKIVFSEKVKKVTFKVSFYGKEARSGYNFGTITWRDTAHSVRTFFAVNNTRAFNHGSEKTTFRSGGFDPNASFSFFRNMGSVRKNVMFLENWNPSCNGVSRFTLVVGYRWIHSDKSVEPLEKSEGKSAITSTDGSRSEEEKKKTRKKLKGKRAVVRWLKFFRWKKKKEYERMTAEEKILFKLNKARRKEKRLVEALEKIEPADSSDTTHDPEILTPEEHFYFLKMGIKGKNYVPVGRRGIYQGVILNMHLHWKKHQTVKVVVKTFSPEEVKEIAAELARLTGGMVLDIHEENTIIMYRGKNYSQPPTEIMSPRVSLSRKKALDKSKYRDGLRAVRKHIPKLEQDLRLLQSQAKLNSKSNGDFIEHVQESVDDTDKSKAISSLGLENLDESKEALRVSKQWSDDSSPMDTGMSSDSEDLSDMFETDSDSEADEKMKQPLYLKEFENFAAETEGKTEDLYDQLRQVSMDSKQAKTLEKDVNSPEFDEVDRLFLRSASLLKKRRR 1225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23380913 23393379 + ClCG08G010690.2 Cla08g01069 278724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01069 1225 Pfam PA domain 380 472 IPR003137 -
Cla08g01069 1225 ProSiteProfiles CRM domain profile. 935 1032 IPR001890 GO:0003723
Cla08g01069 1225 ProSiteProfiles Serine proteases, subtilase domain profile. 113 625 - -
Cla08g01069 1225 Pfam Fibronectin type-III domain 673 770 IPR041469 -
Cla08g01069 1225 MobiDBLite consensus disorder prediction 844 870 - -
Cla08g01069 1225 Pfam CRS1 / YhbY (CRM) domain 937 1021 IPR001890 GO:0003723
Cla08g01069 1225 MobiDBLite consensus disorder prediction 1119 1155 - -
Cla08g01069 1225 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Cla08g01069 1225 Gene3D - 642 773 - -
Cla08g01069 1225 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Cla08g01069 1225 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cla08g01069 1225 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cla08g01069 1225 SUPERFAMILY Subtilisin-like 135 629 IPR036852 GO:0004252|GO:0006508
Cla08g01069 1225 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 90 775 IPR045051 -
Cla08g01069 1225 Gene3D - 936 1033 IPR035920 -
Cla08g01069 1225 Coils Coil 1054 1074 - -
Cla08g01069 1225 Gene3D Peptidase S8/S53 domain 140 638 IPR036852 GO:0004252|GO:0006508
Cla08g01069 1225 SMART CRS1_YhbY_2 937 1021 IPR001890 GO:0003723
Cla08g01069 1225 CDD PA_subtilisin_like 356 487 - -
Cla08g01069 1225 Pfam Subtilase family 139 596 IPR000209 GO:0006508|GO:0008236
Cla08g01069 1225 PANTHER CUCUMISIN-LIKE 90 775 - -
Cla08g01069 1225 CDD Peptidases_S8_3 106 592 IPR034197 -
Cla08g01069 1225 MobiDBLite consensus disorder prediction 1122 1140 - -
Cla08g01069 1225 Gene3D - 350 494 - -
Cla08g01069 1225 SUPERFAMILY YhbY-like 936 1028 IPR035920 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01608 Cla-Chr5:27377695 Cla08g01069 Cla-Chr8:23380913 0 dispersed
Cla06g01466 Cla-Chr6:28204565 Cla08g01069 Cla-Chr8:23380913 3.84E-22 dispersed
Cla08g01069 Cla-Chr8:23380913 Cla10g00388 Cla-Chr10:5273841 1.02E-163 dispersed
Cla09g01886 Cla-Chr9:36565042 Cla08g01069 Cla-Chr8:23380913 2.11E-45 dispersed
Cla10g01485 Cla-Chr10:30067007 Cla08g01069 Cla-Chr8:23380913 1.64E-48 dispersed
Cla11g00206 Cla-Chr11:2406330 Cla08g01069 Cla-Chr8:23380913 2.78E-07 dispersed
Cla11g00747 Cla-Chr11:10676337 Cla08g01069 Cla-Chr8:23380913 1.39E-15 dispersed
Cla08g01069 Cla-Chr8:23380913 Cla09g00096 Cla-Chr9:943443 3.11E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01069 K25898 - csv:101220772 1324.69