Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla08g01110 | ATGCGAGCGCGCCAAGCAGGGACGGGAGAGAGCACAAATCTTTCAAACGAAGTATCTTCTTCGCTGGATCTTCCGGCGAAAATGAGTCACCAACGCCTTTTACTTTTGGTCTCATTTCCTCCTTTGTGTTTCCCATCACGCGCCGGATTCAACGGTTCCACAATCCAACGGCCCATCTCCTCCATCACGAGAATCAAGACCCTTCACCAAATCCAAAACCCAATCCTAGCCGTCCAAAATGCCCAAGATTCTCCACTTCCCTCCATCCGACGGCCATCCTACGAACTACAGTATCTCAGGAAGCGGTTATGTAGAAGCAGCAGCATCAACAAGAAGAATCAAGCCAAAAACACAGCCAAAAAGGCATTTCTCGGACGGAGAAATTCCACAGAGCTCCGGCCATGGAGAAGGAGAGAGAGCACCTTGTTTACTTGGCTAGACTTGCAGAACAAGCTGAGAGATATGATGAGCGTTGCAAAGTTGGATGTAGAACTTACCGTGGAGGAGAGGAACCTGGTCTCTGTGGGATATAAGAATGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTTTATCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAACGAGGTTAATGTGAAGAGGGTAAAGGAGTACAGGCAGAGGGTTGAAGACGAACTGGCGAGAATTTGCCAGGACATCTTAACTGTTGTTGACAAGCATCTCATTCCATCTTCATCCTCTGGAGAATCCAATGTTTTTTACTATAAGATGAAGGGGGATTATAACCGATACTTAGCGGAGTTTAAATCTGGCCGTGAACGTGAAGAAGCTGCAGACCAGTCGATGAAGGCCTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTGCCTCCAACACACCCCATCAGACTTGGCTTGGCGCTTAACTTTTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCGTGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGACGGCCTCAATGAAGAATCCTACAAGGACAGTACCCTCATTATGCAGCTGCTGAGGGATAATCTAACGTTATGGACCTCAGATCTCCCAGATGAGGGAGAGGCAACTGGCAACATATTCCAACGGTCTTTCGTCAGTCGAAGGACGTCCTTCTTAAGTGCTTGGAACAATTATCTACTAGCTATATATCTTGCACAGCTAATTACTGTTGACATGGTTCTAGGAGGCAGGACGTATAGCTGTGCCACTTTTCTTTCTTATTAG | 1266 | 46.45 | MRARQAGTGESTNLSNEVSSSLDLPAKMSHQRLLLLVSFPPLCFPSRAGFNGSTIQRPISSITRIKTLHQIQNPILAVQNAQDSPLPSIRRPSYELQYLRKRLCRSSSINKKNQAKNTAKKAFLGRRNSTELRPWRRRESTLFTWLDLQNKLRDMMSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEVNVKRVKEYRQRVEDELARICQDILTVVDKHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGREREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPDEGEATGNIFQRSFVSRRTSFLSAWNNYLLAIYLAQLITVDMVLGGRTYSCATFLSY | 421 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 23868916 | 23872071 | - | ClCG08G011120.2 | Cla08g01110 | 278765 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla08g01110 | 421 | PANTHER | 14-3-3-LIKE PROTEIN GF14 OMICRON | 153 | 369 | - | - | |
Cla08g01110 | 421 | Gene3D | - | 147 | 372 | IPR036815 | - | |
Cla08g01110 | 421 | PRINTS | 14-3-3 protein zeta signature | 244 | 266 | IPR000308 | - | |
Cla08g01110 | 421 | PRINTS | 14-3-3 protein zeta signature | 213 | 237 | IPR000308 | - | |
Cla08g01110 | 421 | PRINTS | 14-3-3 protein zeta signature | 306 | 332 | IPR000308 | - | |
Cla08g01110 | 421 | PRINTS | 14-3-3 protein zeta signature | 333 | 362 | IPR000308 | - | |
Cla08g01110 | 421 | PRINTS | 14-3-3 protein zeta signature | 164 | 193 | IPR000308 | - | |
Cla08g01110 | 421 | PRINTS | 14-3-3 protein zeta signature | 279 | 305 | IPR000308 | - | |
Cla08g01110 | 421 | SMART | 1433_4 | 137 | 373 | IPR023410 | - | |
Cla08g01110 | 421 | ProSitePatterns | 14-3-3 proteins signature 1. | 170 | 180 | IPR023409 | - | |
Cla08g01110 | 421 | PANTHER | 14-3-3 PROTEIN | 153 | 369 | IPR000308 | - | |
Cla08g01110 | 421 | Pfam | 14-3-3 protein | 152 | 360 | IPR023410 | - | |
Cla08g01110 | 421 | SUPERFAMILY | 14-3-3 protein | 154 | 367 | IPR036815 | - | |
Cla08g01110 | 421 | ProSitePatterns | 14-3-3 proteins signature 2. | 342 | 361 | IPR023409 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla08g01110 | Cla11g01382 | CCT | |
Cla08g01110 | Cla11g01382 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla08g01110 | Cla-Chr8:23868916 | Cla08g01123 | Cla-Chr8:23987753 | 6.57E-107 | dispersed | |
Cla07g00262 | Cla-Chr7:2904787 | Cla08g01110 | Cla-Chr8:23868916 | 6.42E-133 | transposed | |
Cla11g01382 | Cla-Chr11:27349996 | Cla08g01110 | Cla-Chr8:23868916 | 4.89E-125 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla08g01110 | K06630 | - | csv:101222677 | 390.963 |