Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01110 ATGCGAGCGCGCCAAGCAGGGACGGGAGAGAGCACAAATCTTTCAAACGAAGTATCTTCTTCGCTGGATCTTCCGGCGAAAATGAGTCACCAACGCCTTTTACTTTTGGTCTCATTTCCTCCTTTGTGTTTCCCATCACGCGCCGGATTCAACGGTTCCACAATCCAACGGCCCATCTCCTCCATCACGAGAATCAAGACCCTTCACCAAATCCAAAACCCAATCCTAGCCGTCCAAAATGCCCAAGATTCTCCACTTCCCTCCATCCGACGGCCATCCTACGAACTACAGTATCTCAGGAAGCGGTTATGTAGAAGCAGCAGCATCAACAAGAAGAATCAAGCCAAAAACACAGCCAAAAAGGCATTTCTCGGACGGAGAAATTCCACAGAGCTCCGGCCATGGAGAAGGAGAGAGAGCACCTTGTTTACTTGGCTAGACTTGCAGAACAAGCTGAGAGATATGATGAGCGTTGCAAAGTTGGATGTAGAACTTACCGTGGAGGAGAGGAACCTGGTCTCTGTGGGATATAAGAATGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTTTATCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAACGAGGTTAATGTGAAGAGGGTAAAGGAGTACAGGCAGAGGGTTGAAGACGAACTGGCGAGAATTTGCCAGGACATCTTAACTGTTGTTGACAAGCATCTCATTCCATCTTCATCCTCTGGAGAATCCAATGTTTTTTACTATAAGATGAAGGGGGATTATAACCGATACTTAGCGGAGTTTAAATCTGGCCGTGAACGTGAAGAAGCTGCAGACCAGTCGATGAAGGCCTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTGCCTCCAACACACCCCATCAGACTTGGCTTGGCGCTTAACTTTTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCGTGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGACGGCCTCAATGAAGAATCCTACAAGGACAGTACCCTCATTATGCAGCTGCTGAGGGATAATCTAACGTTATGGACCTCAGATCTCCCAGATGAGGGAGAGGCAACTGGCAACATATTCCAACGGTCTTTCGTCAGTCGAAGGACGTCCTTCTTAAGTGCTTGGAACAATTATCTACTAGCTATATATCTTGCACAGCTAATTACTGTTGACATGGTTCTAGGAGGCAGGACGTATAGCTGTGCCACTTTTCTTTCTTATTAG 1266 46.45 MRARQAGTGESTNLSNEVSSSLDLPAKMSHQRLLLLVSFPPLCFPSRAGFNGSTIQRPISSITRIKTLHQIQNPILAVQNAQDSPLPSIRRPSYELQYLRKRLCRSSSINKKNQAKNTAKKAFLGRRNSTELRPWRRRESTLFTWLDLQNKLRDMMSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEVNVKRVKEYRQRVEDELARICQDILTVVDKHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGREREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPDEGEATGNIFQRSFVSRRTSFLSAWNNYLLAIYLAQLITVDMVLGGRTYSCATFLSY 421
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23868916 23872071 - ClCG08G011120.2 Cla08g01110 278765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01110 421 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 153 369 - -
Cla08g01110 421 Gene3D - 147 372 IPR036815 -
Cla08g01110 421 PRINTS 14-3-3 protein zeta signature 244 266 IPR000308 -
Cla08g01110 421 PRINTS 14-3-3 protein zeta signature 213 237 IPR000308 -
Cla08g01110 421 PRINTS 14-3-3 protein zeta signature 306 332 IPR000308 -
Cla08g01110 421 PRINTS 14-3-3 protein zeta signature 333 362 IPR000308 -
Cla08g01110 421 PRINTS 14-3-3 protein zeta signature 164 193 IPR000308 -
Cla08g01110 421 PRINTS 14-3-3 protein zeta signature 279 305 IPR000308 -
Cla08g01110 421 SMART 1433_4 137 373 IPR023410 -
Cla08g01110 421 ProSitePatterns 14-3-3 proteins signature 1. 170 180 IPR023409 -
Cla08g01110 421 PANTHER 14-3-3 PROTEIN 153 369 IPR000308 -
Cla08g01110 421 Pfam 14-3-3 protein 152 360 IPR023410 -
Cla08g01110 421 SUPERFAMILY 14-3-3 protein 154 367 IPR036815 -
Cla08g01110 421 ProSitePatterns 14-3-3 proteins signature 2. 342 361 IPR023409 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla08g01110 Cla11g01382 CCT
Cla08g01110 Cla11g01382 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01110 Cla-Chr8:23868916 Cla08g01123 Cla-Chr8:23987753 6.57E-107 dispersed
Cla07g00262 Cla-Chr7:2904787 Cla08g01110 Cla-Chr8:23868916 6.42E-133 transposed
Cla11g01382 Cla-Chr11:27349996 Cla08g01110 Cla-Chr8:23868916 4.89E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01110 K06630 - csv:101222677 390.963