Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla08g01123 ATGGCTGCCGCCCCTTCTGTTCGCGAGGAGAATGTTTACATGGCCAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCCCTCGACAAGGAGGAGCTCACCGTCGAGGAGAGAAACCTCCTTTCTGTCGCCTACAAGAACGTCATCGGCGCTCGCAGGGCTTCCTGGCGTATCATTTCCTCCATCGAACAAAAGGAGGAGAGCCGAGGCAACGACGACCATGTCTCTGTGATCCGTGACTATAGATCCAAAATTGAGACCGAACTCTCCAATATTTGCGATGGAATCCTCAAGCTTCTCGATTCCAGACTCATTCCCTCCGCCGCTTCCGGAGATTCCAAGGTTTTTTACCTCAAAATGAAGGGAGATTACCATAGATACCTCGCCGAATTCAAAACCGGAGCCGAACGCAAGGAAGCTGCTGAAAGCACTCTCACTGCTTACAAAGCCGCTCAGGATATTGCAAATGCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCCCTTAACTTCTCTGTATTCTACTATGAAATTTTGAATTCACCTGATCGTGCCTGCAGTCTTGCAAAACAGGCGTTTGATGAAGCTATCGCTGAATTGGATACCCTTGGCGAGGAATCCTACAAAGATAGTACTTTGATCATGCAGCTTCTTCGCGATAATCTCACTCTCTGGACATCGGACATGCAGGATGATGGTGCTGATGAGATTAAAGAAGCTCCCCCCAAGCGAGAAGATGCTTGCTTGTTGTTGCTTATTTGGTACTATCCTGAGTTCTCTAAAGGCTCTCATGTCATTTGTTGCCGGATTGTGACCCGAGCTACAAACCTTGTTTACTTTTTCTGA 882 48.98 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASLDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDACLLLLIWYYPEFSKGSHVICCRIVTRATNLVYFF 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23987753 23989567 + ClCG08G011250.2 Cla08g01123 278778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla08g01123 293 Gene3D - 2 251 IPR036815 -
Cla08g01123 293 Pfam 14-3-3 protein 14 238 IPR023410 -
Cla08g01123 293 SUPERFAMILY 14-3-3 protein 8 240 IPR036815 -
Cla08g01123 293 Coils Coil 14 41 - -
Cla08g01123 293 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cla08g01123 293 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cla08g01123 293 PIRSF 14-3-3 2 250 IPR000308 -
Cla08g01123 293 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cla08g01123 293 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cla08g01123 293 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cla08g01123 293 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cla08g01123 293 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cla08g01123 293 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cla08g01123 293 PANTHER 14-3-3 PROTEIN 5 253 IPR000308 -
Cla08g01123 293 CDD 14-3-3_plant 8 244 - -
Cla08g01123 293 SMART 1433_4 8 251 IPR023410 -
Cla08g01123 293 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 253 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla08g01123 Cla11g01392 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01043 Cla-Chr8:23114095 Cla08g01123 Cla-Chr8:23987753 8.11E-81 dispersed
Cla08g01110 Cla-Chr8:23868916 Cla08g01123 Cla-Chr8:23987753 6.57E-107 dispersed
Cla08g01123 Cla-Chr8:23987753 Cla08g01178 Cla-Chr8:24669651 2.24E-133 dispersed
Cla07g01545 Cla-Chr7:32645947 Cla08g01123 Cla-Chr8:23987753 6.38E-162 transposed
Cla11g01392 Cla-Chr11:27459767 Cla08g01123 Cla-Chr8:23987753 2.83E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla08g01123 K06630 - csv:101220164 503.056